RNA–Protein interactions for RNA: ENST00000479808.5

SYP-207, Transcript of synaptophysin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYP, Length 1,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYP-207ENST00000479808 NISCHQ9Y2I1 1504 aa35.1■■■■□ 3.21
SYP-207ENST00000479808 CCDC180Q9P1Z9 1646 aa30.55■■■□□ 2.48
SYP-207ENST00000479808 ZCCHC6Q5VYS8 1495 aaKnown RBP29.51■■■□□ 2.32
SYP-207ENST00000479808 DCAF8L2P0C7V8 631 aa29■■■□□ 2.23
SYP-207ENST00000479808 DCAF1Q9Y4B6 1507 aa28.98■■■□□ 2.23
SYP-207ENST00000479808 ABCC9O60706 1549 aa28.84■■■□□ 2.21
SYP-207ENST00000479808 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
SYP-207ENST00000479808 MYO15BQ96JP2 1530 aa28.59■■■□□ 2.17
SYP-207ENST00000479808 NACADO15069 1562 aa28.42■■■□□ 2.14
SYP-207ENST00000479808 SCRIBQ14160 1630 aa28.17■■■□□ 2.1
SYP-207ENST00000479808 RB1CC1Q8TDY2 1594 aa28.16■■■□□ 2.1
SYP-207ENST00000479808 SUPT5HO00267 1087 aaKnown RBP27.72■■■□□ 2.03
SYP-207ENST00000479808 UNC13AQ9UPW8 1703 aa27.67■■■□□ 2.02
SYP-207ENST00000479808 BICRAQ9NZM4 1560 aa27.34■■□□□ 1.97
SYP-207ENST00000479808 CECR2Q9BXF3 1484 aa27.3■■□□□ 1.96
SYP-207ENST00000479808 RSF1Q96T23 1441 aaPredicted RBP27.28■■□□□ 1.96
SYP-207ENST00000479808 PABPN1Q86U42 306 aaKnown RBP eCLIP27.23■■□□□ 1.95
SYP-207ENST00000479808 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
SYP-207ENST00000479808 BAZ1AQ9NRL2 1556 aaPredicted RBP27.09■■□□□ 1.93
SYP-207ENST00000479808 SMARCA4P51532 1647 aa26.98■■□□□ 1.91
SYP-207ENST00000479808 WIZO95785 1651 aa26.96■■□□□ 1.91
SYP-207ENST00000479808 TOP2AP11388 1531 aaKnown RBP26.63■■□□□ 1.85
SYP-207ENST00000479808 PEG3Q9GZU2 1588 aa26.62■■□□□ 1.85
SYP-207ENST00000479808 CHIC1Q5VXU3 224 aa26.56■■□□□ 1.84
SYP-207ENST00000479808 EIF4G1Q04637 1599 aaKnown RBP26.51■■□□□ 1.83
SYP-207ENST00000479808 ATAD2BQ9ULI0 1458 aa26.5■■□□□ 1.83
SYP-207ENST00000479808 SMARCA2P51531 1590 aa26.47■■□□□ 1.83
SYP-207ENST00000479808 CCDC88BA6NC98 1476 aa26.37■■□□□ 1.81
SYP-207ENST00000479808 BAZ1BQ9UIG0 1483 aaKnown RBP26.36■■□□□ 1.81
SYP-207ENST00000479808 NCAPD3P42695 1498 aa26.23■■□□□ 1.79
SYP-207ENST00000479808 HMGXB3Q12766 1538 aa26.21■■□□□ 1.79
SYP-207ENST00000479808 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
SYP-207ENST00000479808 TRIM41Q8WV44 630 aa26.02■■□□□ 1.76
SYP-207ENST00000479808 ABCC8Q09428 1581 aa25.89■■□□□ 1.74
SYP-207ENST00000479808 CFTRP13569 1480 aa25.69■■□□□ 1.7
SYP-207ENST00000479808 WRNQ14191 1432 aaPredicted RBP eCLIP25.68■■□□□ 1.7
SYP-207ENST00000479808 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
SYP-207ENST00000479808 FAM9AQ8IZU1 332 aaPredicted RBP25.6■■□□□ 1.69
SYP-207ENST00000479808 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
SYP-207ENST00000479808 LOC105371045A0A1W2PR82 267 aa25.58■■□□□ 1.69
SYP-207ENST00000479808 CADPSQ9ULU8 1353 aa25.57■■□□□ 1.68
SYP-207ENST00000479808 TOP2BQ02880 1626 aa25.46■■□□□ 1.67
SYP-207ENST00000479808 DNAJC5BQ9UF47 199 aa25.45■■□□□ 1.66
SYP-207ENST00000479808 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
SYP-207ENST00000479808 SOGA1O94964 1423 aa25.41■■□□□ 1.66
SYP-207ENST00000479808 CUX1P39880 1505 aa25.38■■□□□ 1.65
SYP-207ENST00000479808 NESP48681 1621 aa25.36■■□□□ 1.65
SYP-207ENST00000479808 LAMC3Q9Y6N6 1575 aa25.33■■□□□ 1.65
SYP-207ENST00000479808 EEA1Q15075 1411 aa25.32■■□□□ 1.64
SYP-207ENST00000479808 RUSC2Q8N2Y8 1516 aa25.32■■□□□ 1.64
SYP-207ENST00000479808 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
SYP-207ENST00000479808 EHMT2Q96KQ7 1210 aa25.26■■□□□ 1.63
SYP-207ENST00000479808 CSRNP3Q8WYN3 585 aa25.2■■□□□ 1.62
SYP-207ENST00000479808 CEP164Q9UPV0 1460 aa25.13■■□□□ 1.61
SYP-207ENST00000479808 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
SYP-207ENST00000479808 DNMBPQ6XZF7 1577 aa25.1■■□□□ 1.61
SYP-207ENST00000479808 FGD5Q6ZNL6 1462 aa25.08■■□□□ 1.6
SYP-207ENST00000479808 KIF21AQ7Z4S6 1674 aa25.07■■□□□ 1.6
SYP-207ENST00000479808 TOPBP1Q92547 1522 aa25.05■■□□□ 1.6
SYP-207ENST00000479808 KIF21BO75037 1637 aa25.02■■□□□ 1.6
SYP-207ENST00000479808 GOLGA3Q08378 1498 aa25■■□□□ 1.59
SYP-207ENST00000479808 KIF27Q86VH2 1401 aa25■■□□□ 1.59
SYP-207ENST00000479808 URB2Q14146 1524 aaKnown RBP25■■□□□ 1.59
SYP-207ENST00000479808 POLA1P09884 1462 aaPredicted RBP24.95■■□□□ 1.58
SYP-207ENST00000479808 TNIKQ9UKE5 1360 aa24.94■■□□□ 1.58
SYP-207ENST00000479808 CUX2O14529 1486 aa24.93■■□□□ 1.58
SYP-207ENST00000479808 UBTFP17480 764 aaKnown RBP24.91■■□□□ 1.58
SYP-207ENST00000479808 RAPGEF2Q9Y4G8 1499 aa24.89■■□□□ 1.57
SYP-207ENST00000479808 RAD54L2Q9Y4B4 1467 aa24.88■■□□□ 1.57
SYP-207ENST00000479808 PRXQ9BXM0 1461 aa24.86■■□□□ 1.57
SYP-207ENST00000479808 ABCA10Q8WWZ4 1543 aa24.84■■□□□ 1.57
SYP-207ENST00000479808 CEP162Q5TB80 1403 aa24.84■■□□□ 1.57
SYP-207ENST00000479808 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
SYP-207ENST00000479808 MRC2Q9UBG0 1479 aa24.81■■□□□ 1.56
SYP-207ENST00000479808 WDR97A6NE52 1622 aa24.78■■□□□ 1.56
SYP-207ENST00000479808 IGF1RP08069 1367 aa24.77■■□□□ 1.56
SYP-207ENST00000479808 ERCC6Q03468 1493 aa24.7■■□□□ 1.54
SYP-207ENST00000479808 WDR62O43379 1518 aa24.68■■□□□ 1.54
SYP-207ENST00000479808 TARBP1Q13395 1621 aaKnown RBP24.68■■□□□ 1.54
SYP-207ENST00000479808 CARMIL1Q5VZK9 1371 aa24.65■■□□□ 1.54
SYP-207ENST00000479808 ABCA5Q8WWZ7 1642 aa24.65■■□□□ 1.54
SYP-207ENST00000479808 CLIP1P30622 1438 aa24.62■■□□□ 1.53
SYP-207ENST00000479808 TDRD9Q8NDG6 1382 aaKnown RBP24.62■■□□□ 1.53
SYP-207ENST00000479808 THOC2Q8NI27 1593 aaKnown RBP24.6■■□□□ 1.53
SYP-207ENST00000479808 GAPVD1Q14C86 1478 aa24.58■■□□□ 1.53
SYP-207ENST00000479808 CUL7Q14999 1698 aa24.58■■□□□ 1.53
SYP-207ENST00000479808 RANGAP1P46060 587 aaPredicted RBP24.52■■□□□ 1.52
SYP-207ENST00000479808 PCGF6Q9BYE7 350 aa24.51■■□□□ 1.51
SYP-207ENST00000479808 IFT140Q96RY7 1462 aa24.51■■□□□ 1.51
SYP-207ENST00000479808 PBRM1Q86U86 1689 aa24.47■■□□□ 1.51
SYP-207ENST00000479808 AQRO60306 1485 aaKnown RBP eCLIP24.45■■□□□ 1.5
SYP-207ENST00000479808 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.5
SYP-207ENST00000479808 ZNF608Q9ULD9 1512 aaPredicted RBP24.42■■□□□ 1.5
SYP-207ENST00000479808 VPS8Q8N3P4 1428 aa24.42■■□□□ 1.5
SYP-207ENST00000479808 PPARGC1BQ86YN6 1023 aaKnown RBP24.41■■□□□ 1.5
SYP-207ENST00000479808 ARAP1Q96P48 1450 aa24.38■■□□□ 1.49
SYP-207ENST00000479808 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
SYP-207ENST00000479808 CTTNBP2Q8WZ74 1663 aa24.35■■□□□ 1.49
SYP-207ENST00000479808 ARHGAP35Q9NRY4 1499 aa24.35■■□□□ 1.49
SYP-207ENST00000479808 EIF4G3O43432 1585 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms