RNA–Protein interactions for RNA: ENST00000406610.6

PARD3B-204, Transcript of par-3 family cell polarity regulator beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PARD3B, Length 8,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARD3B-204ENST00000406610 DCAF8L2P0C7V8 631 aa25.43■■□□□ 1.66
PARD3B-204ENST00000406610 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
PARD3B-204ENST00000406610 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
PARD3B-204ENST00000406610 EHMT2Q96KQ7 1210 aa23.92■■□□□ 1.42
PARD3B-204ENST00000406610 ERICH6Q7L0X2 663 aa23.64■■□□□ 1.37
PARD3B-204ENST00000406610 APLP2Q06481 763 aa23.51■■□□□ 1.35
PARD3B-204ENST00000406610 CCER1Q8TC90 406 aaPredicted RBP23.37■■□□□ 1.33
PARD3B-204ENST00000406610 SHROOM4Q9ULL8 1493 aa23.29■■□□□ 1.32
PARD3B-204ENST00000406610 FAM9AQ8IZU1 332 aaPredicted RBP23.22■■□□□ 1.31
PARD3B-204ENST00000406610 TTBK1Q5TCY1 1321 aaPredicted RBP23.16■■□□□ 1.3
PARD3B-204ENST00000406610 CENPBP07199 599 aaPredicted RBP23.01■■□□□ 1.27
PARD3B-204ENST00000406610 PCGF6Q9BYE7 350 aa22.92■■□□□ 1.26
PARD3B-204ENST00000406610 MYT1Q01538 1121 aa22.79■■□□□ 1.24
PARD3B-204ENST00000406610 NEFLP07196 543 aa22.77■■□□□ 1.24
PARD3B-204ENST00000406610 RANGAP1P46060 587 aaPredicted RBP22.76■■□□□ 1.23
PARD3B-204ENST00000406610 ATP1B4Q9UN42 357 aaPredicted RBP22.73■■□□□ 1.23
PARD3B-204ENST00000406610 YTHDC1Q96MU7 727 aaKnown RBP22.56■■□□□ 1.2
PARD3B-204ENST00000406610 DAXXQ9UER7 740 aaPredicted RBP22.52■■□□□ 1.2
PARD3B-204ENST00000406610 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
PARD3B-204ENST00000406610 UBTFP17480 764 aaKnown RBP22.17■■□□□ 1.14
PARD3B-204ENST00000406610 NISCHQ9Y2I1 1504 aa22.12■■□□□ 1.13
PARD3B-204ENST00000406610 POLR3GLQ9BT43 218 aa22.1■■□□□ 1.13
PARD3B-204ENST00000406610 TRIM41Q8WV44 630 aa22.09■■□□□ 1.13
PARD3B-204ENST00000406610 MYT1LQ9UL68 1186 aa22.05■■□□□ 1.12
PARD3B-204ENST00000406610 ZNF316A6NFI3 1004 aaPredicted RBP21.92■■□□□ 1.1
PARD3B-204ENST00000406610 CNGB1Q14028 1251 aaPredicted RBP21.92■■□□□ 1.1
PARD3B-204ENST00000406610 PPARGC1BQ86YN6 1023 aaKnown RBP21.88■■□□□ 1.09
PARD3B-204ENST00000406610 SLC4A1APQ9BWU0 796 aaKnown RBP21.86■■□□□ 1.09
PARD3B-204ENST00000406610 CHIC1Q5VXU3 224 aa21.84■■□□□ 1.09
PARD3B-204ENST00000406610 CLSPNQ9HAW4 1339 aa21.82■■□□□ 1.08
PARD3B-204ENST00000406610 RTL5Q5HYW3 569 aaPredicted RBP21.82■■□□□ 1.08
PARD3B-204ENST00000406610 ITGAEP38570 1179 aa21.75■■□□□ 1.07
PARD3B-204ENST00000406610 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
PARD3B-204ENST00000406610 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
PARD3B-204ENST00000406610 TRIM26Q12899 539 aaPredicted RBP21.47■■□□□ 1.03
PARD3B-204ENST00000406610 HRCP23327 699 aa21.4■■□□□ 1.02
PARD3B-204ENST00000406610 ZBTB47Q9UFB7 747 aaPredicted RBP21.36■■□□□ 1.01
PARD3B-204ENST00000406610 BCL11AQ9H165 835 aa21.3■■□□□ 1
PARD3B-204ENST00000406610 SLC24A1O60721 1099 aa21.29■■□□□ 1
PARD3B-204ENST00000406610 DIEXFQ68CQ4 756 aaKnown RBP21.13■□□□□ 0.97
PARD3B-204ENST00000406610 BCANQ96GW7 911 aa21.12■□□□□ 0.97
PARD3B-204ENST00000406610 CDK11AQ9UQ88 783 aaPredicted RBP21.09■□□□□ 0.97
PARD3B-204ENST00000406610 CANXP27824 592 aaKnown RBP21.07■□□□□ 0.96
PARD3B-204ENST00000406610 FAM50AQ14320 339 aaKnown RBP21.03■□□□□ 0.96
PARD3B-204ENST00000406610 TRIM52Q96A61 297 aa21.01■□□□□ 0.95
PARD3B-204ENST00000406610 NEUROD1Q13562 356 aa20.97■□□□□ 0.95
PARD3B-204ENST00000406610 ZNF326Q5BKZ1 582 aaKnown RBP20.93■□□□□ 0.94
PARD3B-204ENST00000406610 EIF5BO60841 1220 aaKnown RBP20.91■□□□□ 0.94
PARD3B-204ENST00000406610 LOC105371045A0A1W2PR82 267 aa20.91■□□□□ 0.94
PARD3B-204ENST00000406610 NEFMP07197 916 aa20.9■□□□□ 0.94
PARD3B-204ENST00000406610 ANP32BQ92688 251 aaKnown RBP20.89■□□□□ 0.94
PARD3B-204ENST00000406610 ANP32CO43423 234 aa20.89■□□□□ 0.94
PARD3B-204ENST00000406610 ANP32AP39687 249 aaKnown RBP20.84■□□□□ 0.93
PARD3B-204ENST00000406610 GTF3C3Q9Y5Q9 886 aa20.8■□□□□ 0.92
PARD3B-204ENST00000406610 HSP90AA1P07900 732 aaKnown RBP20.79■□□□□ 0.92
PARD3B-204ENST00000406610 NPM2Q86SE8 214 aaKnown RBP20.79■□□□□ 0.92
PARD3B-204ENST00000406610 GLIPR1L2Q4G1C9 344 aa20.68■□□□□ 0.9
PARD3B-204ENST00000406610 UPF2Q9HAU5 1272 aaKnown RBP20.56■□□□□ 0.88
PARD3B-204ENST00000406610 CDK11BP21127 795 aaKnown RBP20.5■□□□□ 0.87
PARD3B-204ENST00000406610 ARXQ96QS3 562 aa20.5■□□□□ 0.87
PARD3B-204ENST00000406610 FBLN2P98095 1184 aa20.45■□□□□ 0.86
PARD3B-204ENST00000406610 NBR1Q14596 966 aa20.37■□□□□ 0.85
PARD3B-204ENST00000406610 PLPPR3Q6T4P5 718 aa20.35■□□□□ 0.85
PARD3B-204ENST00000406610 ESF1Q9H501 851 aaKnown RBP20.33■□□□□ 0.84
PARD3B-204ENST00000406610 STAG3Q9UJ98 1225 aa20.29■□□□□ 0.84
PARD3B-204ENST00000406610 FKBP8Q14318 412 aa20.28■□□□□ 0.84
PARD3B-204ENST00000406610 ARID3CA6NKF2 412 aa20.27■□□□□ 0.83
PARD3B-204ENST00000406610 SALL2Q9Y467 1007 aaPredicted RBP20.26■□□□□ 0.83
PARD3B-204ENST00000406610 ZNF777Q9ULD5 760 aaPredicted RBP20.22■□□□□ 0.83
PARD3B-204ENST00000406610 CHGAP10645 457 aaKnown RBP20.22■□□□□ 0.83
PARD3B-204ENST00000406610 A0A0G2JS52 829 aa20.2■□□□□ 0.82
PARD3B-204ENST00000406610 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.19■□□□□ 0.82
PARD3B-204ENST00000406610 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
PARD3B-204ENST00000406610 ACIN1Q9UKV3 1341 aaKnown RBP20.18■□□□□ 0.82
PARD3B-204ENST00000406610 FAM9BQ8IZU0 186 aa20.17■□□□□ 0.82
PARD3B-204ENST00000406610 HNRNPUQ00839 825 aaKnown RBP eCLIP20.16■□□□□ 0.82
PARD3B-204ENST00000406610 CCDC136Q96JN2 1154 aa20.13■□□□□ 0.81
PARD3B-204ENST00000406610 P3H3Q8IVL6 736 aa20.12■□□□□ 0.81
PARD3B-204ENST00000406610 TULP1O00294 542 aaPredicted RBP20.11■□□□□ 0.81
PARD3B-204ENST00000406610 TRIM44Q96DX7 344 aaPredicted RBP20.1■□□□□ 0.81
PARD3B-204ENST00000406610 MYH16Q9H6N6 1097 aa20.1■□□□□ 0.81
PARD3B-204ENST00000406610 TNNT2P45379 298 aaPredicted RBP20.08■□□□□ 0.8
PARD3B-204ENST00000406610 NCLP19338 710 aaKnown RBP20.04■□□□□ 0.8
PARD3B-204ENST00000406610 TMC1Q8TDI8 760 aa20.04■□□□□ 0.8
PARD3B-204ENST00000406610 WDR43Q15061 677 aaKnown RBP eCLIP20.03■□□□□ 0.8
PARD3B-204ENST00000406610 TONSLQ96HA7 1378 aa20.03■□□□□ 0.8
PARD3B-204ENST00000406610 ZRSR1Q15695 479 aaKnown RBP19.99■□□□□ 0.79
PARD3B-204ENST00000406610 DNTTIP2Q5QJE6 756 aaKnown RBP19.96■□□□□ 0.79
PARD3B-204ENST00000406610 PLEKHG5O94827 1062 aa19.96■□□□□ 0.79
PARD3B-204ENST00000406610 TPRNQ4KMQ1 711 aa19.94■□□□□ 0.78
PARD3B-204ENST00000406610 ZBTB7CA1YPR0 619 aa19.93■□□□□ 0.78
PARD3B-204ENST00000406610 PTMAP06454 111 aaKnown RBP19.93■□□□□ 0.78
PARD3B-204ENST00000406610 DDX10Q13206 875 aaKnown RBP19.93■□□□□ 0.78
PARD3B-204ENST00000406610 BECN1Q14457 450 aa19.93■□□□□ 0.78
PARD3B-204ENST00000406610 PABPN1Q86U42 306 aaKnown RBP eCLIP19.93■□□□□ 0.78
PARD3B-204ENST00000406610 GOLGA6L22H0YM25 854 aa19.91■□□□□ 0.78
PARD3B-204ENST00000406610 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.88■□□□□ 0.77
PARD3B-204ENST00000406610 C14orf37Q86TY3 774 aa19.86■□□□□ 0.77
PARD3B-204ENST00000406610 IRX6P78412 446 aaPredicted RBP19.85■□□□□ 0.77
PARD3B-204ENST00000406610 DDRGK1Q96HY6 314 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms