Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 TSC1-201ENST00000298552 8604 ntAPPRIS P1 TSL 1 (best) BASIC7.75□□□□□ -1.172e-7■■■□□ 14.6
U2AF2P26368 ITSN1-202ENST00000381283 1116 ntTSL 520.27■□□□□ 0.842e-6■■■□□ 14.6
U2AF2P26368 GNPAT-203ENST00000436239 839 ntAPPRIS ALT2 TSL 320.15■□□□□ 0.822e-6■■■□□ 14.6
U2AF2P26368 COQ6-205ENST00000553922 933 ntTSL 219.89■□□□□ 0.772e-6■■■□□ 14.6
U2AF2P26368 COQ6-214ENST00000555552 558 ntTSL 419.89■□□□□ 0.772e-6■■■□□ 14.6
U2AF2P26368 COQ6-206ENST00000554193 576 ntTSL 1 (best)19.37■□□□□ 0.692e-6■■■□□ 14.6
U2AF2P26368 ITSN1-230ENST00000488166 986 ntTSL 318.61■□□□□ 0.572e-6■■■□□ 14.6
U2AF2P26368 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC18.44■□□□□ 0.542e-6■■■□□ 14.6
U2AF2P26368 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC18.22■□□□□ 0.512e-6■■■□□ 14.6
U2AF2P26368 RAD52-210ENST00000535376 808 ntTSL 317.83■□□□□ 0.442e-6■■■□□ 14.6
U2AF2P26368 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.88■□□□□ 0.292e-6■■■□□ 14.6
U2AF2P26368 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC16.82■□□□□ 0.282e-6■■■□□ 14.6
U2AF2P26368 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.232e-6■■■□□ 14.6
U2AF2P26368 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.87□□□□□ -0.032e-6■■■□□ 14.6
U2AF2P26368 ITSN1-207ENST00000399338 3115 ntTSL 1 (best) BASIC13.71□□□□□ -0.212e-6■■■□□ 14.6
U2AF2P26368 ITSN1-211ENST00000399355 4003 ntTSL 1 (best) BASIC13.68□□□□□ -0.222e-6■■■□□ 14.6
U2AF2P26368 COQ6-212ENST00000555392 1118 ntTSL 313.67□□□□□ -0.222e-6■■■□□ 14.6
U2AF2P26368 ITSN1-201ENST00000379960 3026 ntTSL 1 (best) BASIC13.39□□□□□ -0.272e-6■■■□□ 14.6
U2AF2P26368 COQ6-211ENST00000555196 737 ntTSL 312.12□□□□□ -0.472e-6■■■□□ 14.6
U2AF2P26368 RAD52-213ENST00000542297 399 ntTSL 211.48□□□□□ -0.572e-6■■■□□ 14.6
U2AF2P26368 HUWE1-206ENST00000463852 586 ntTSL 211.2□□□□□ -0.628e-16■■■□□ 14.6
U2AF2P26368 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.12e-6■■■□□ 14.6
U2AF2P26368 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.921e-7■■■□□ 14.6
U2AF2P26368 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.061e-7■■■□□ 14.6
U2AF2P26368 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.211e-7■■■□□ 14.6
U2AF2P26368 GOLGB1-205ENST00000482512 10295 ntTSL 1 (best)6.59□□□□□ -1.351e-7■■■□□ 14.6
U2AF2P26368 FXR1-209ENST00000472339 2130 ntTSL 517.6■□□□□ 0.411e-6■■■□□ 14.6
U2AF2P26368 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC16.8■□□□□ 0.281e-6■■■□□ 14.6
U2AF2P26368 FXR1-211ENST00000475315 2341 ntTSL 214.41□□□□□ -0.11e-6■■■□□ 14.6
U2AF2P26368 FXR1-220ENST00000491062 1768 ntTSL 2 BASIC14.24□□□□□ -0.131e-6■■■□□ 14.6
U2AF2P26368 FXR1-207ENST00000468861 1989 ntTSL 2 BASIC13.49□□□□□ -0.251e-6■■■□□ 14.6
U2AF2P26368 FXR1-201ENST00000305586 3277 ntTSL 5 BASIC13.07□□□□□ -0.321e-6■■■□□ 14.6
U2AF2P26368 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.531e-6■■■□□ 14.6
U2AF2P26368 FXR1-203ENST00000445140 2651 ntAPPRIS ALT2 TSL 1 (best) BASIC10.1□□□□□ -0.791e-6■■■□□ 14.6
U2AF2P26368 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC29.53■■■□□ 2.321e-9■■■□□ 14.6
U2AF2P26368 LRRC1-203ENST00000487251 2527 ntTSL 226.23■■□□□ 1.791e-9■■■□□ 14.6
U2AF2P26368 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.2■■□□□ 1.781e-9■■■□□ 14.6
U2AF2P26368 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.53■■□□□ 1.521e-9■■■□□ 14.6
U2AF2P26368 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.241e-9■■■□□ 14.6
U2AF2P26368 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC23.27■■□□□ 1.323e-7■■■□□ 14.6
U2AF2P26368 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC21.35■■□□□ 1.013e-7■■■□□ 14.6
U2AF2P26368 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC19.64■□□□□ 0.733e-7■■■□□ 14.6
U2AF2P26368 CHD1L-205ENST00000467213 2782 ntTSL 1 (best)18.43■□□□□ 0.543e-7■■■□□ 14.6
U2AF2P26368 CHD1L-210ENST00000622533 2937 ntTSL 515.76■□□□□ 0.113e-7■■■□□ 14.6
U2AF2P26368 CHD1L-208ENST00000488864 2415 ntTSL 215.47■□□□□ 0.073e-7■■■□□ 14.6
U2AF2P26368 CHD1L-202ENST00000369258 2967 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.053e-7■■■□□ 14.6
U2AF2P26368 RBM39-227ENST00000470563 384 ntTSL 35.33□□□□□ -1.569e-9■■■□□ 14.6
U2AF2P26368 SNHG14-216ENST00000551938 1108 ntTSL 23.11□□□□□ -1.912e-7■■■□□ 14.6
U2AF2P26368 CAMK2D-209ENST00000509594 583 ntTSL 52.16□□□□□ -2.069e-7■■■□□ 14.6
U2AF2P26368 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC11.62□□□□□ -0.552e-8■■■□□ 14.6
U2AF2P26368 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.393e-6■■■□□ 14.6
U2AF2P26368 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.42■□□□□ 0.543e-6■■■□□ 14.6
U2AF2P26368 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.63■□□□□ 0.413e-6■■■□□ 14.6
U2AF2P26368 DNAJC7-211ENST00000588814 1719 ntTSL 215.57■□□□□ 0.083e-6■■■□□ 14.6
U2AF2P26368 NEDD9-211ENST00000508546 581 ntTSL 510.14□□□□□ -0.795e-7■■■□□ 14.6
U2AF2P26368 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.87□□□□□ -1.474e-8■■■□□ 14.6
U2AF2P26368 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.714e-8■■■□□ 14.6
U2AF2P26368 TFPI-202ENST00000339091 1088 ntTSL 1 (best) BASIC2.64□□□□□ -1.994e-8■■■□□ 14.6
U2AF2P26368 PUM1-202ENST00000373741 4242 ntTSL 1 (best) BASIC13.61□□□□□ -0.236e-7■■■□□ 14.6
U2AF2P26368 PUM1-201ENST00000257075 5360 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.616e-7■■■□□ 14.6
U2AF2P26368 PUM1-203ENST00000373742 3515 ntTSL 2 BASIC10.2□□□□□ -0.786e-7■■■□□ 14.6
U2AF2P26368 PUM1-204ENST00000373747 5375 ntAPPRIS ALT1 TSL 5 BASIC9.81□□□□□ -0.846e-7■■■□□ 14.6
U2AF2P26368 PUM1-205ENST00000424085 4631 ntTSL 5 BASIC8.68□□□□□ -1.026e-7■■■□□ 14.6
U2AF2P26368 PUM1-214ENST00000525843 4528 ntTSL 58.21□□□□□ -1.16e-7■■■□□ 14.6
U2AF2P26368 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.32□□□□□ -1.246e-7■■■□□ 14.6
U2AF2P26368 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC7.2□□□□□ -1.266e-7■■■□□ 14.6
U2AF2P26368 CASP10-201ENST00000272879 2073 ntTSL 2 BASIC8.89□□□□□ -0.992e-6■■■□□ 14.6
U2AF2P26368 CASP10-203ENST00000313728 1521 ntTSL 1 (best) BASIC8.28□□□□□ -1.082e-6■■■□□ 14.6
U2AF2P26368 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC7.98□□□□□ -1.132e-6■■■□□ 14.6
U2AF2P26368 CASP10-213ENST00000492363 1477 ntTSL 27.89□□□□□ -1.152e-6■■■□□ 14.6
U2AF2P26368 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.4□□□□□ -1.222e-6■■■□□ 14.6
U2AF2P26368 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC7.05□□□□□ -1.282e-6■■■□□ 14.6
U2AF2P26368 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.9□□□□□ -1.462e-6■■■□□ 14.6
U2AF2P26368 NUBPL-208ENST00000550649 557 ntTSL 521.32■■□□□ 11e-6■■■□□ 14.6
U2AF2P26368 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.371e-6■■■□□ 14.6
U2AF2P26368 NUBPL-203ENST00000547839 2001 ntTSL 29.62□□□□□ -0.871e-6■■■□□ 14.6
U2AF2P26368 NUBPL-210ENST00000551314 567 ntTSL 48.8□□□□□ -11e-6■■■□□ 14.6
U2AF2P26368 NUBPL-205ENST00000549838 556 ntTSL 52.09□□□□□ -2.071e-6■■■□□ 14.6
U2AF2P26368 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.93■■□□□ 1.426e-9■■■□□ 14.6
U2AF2P26368 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC6.21□□□□□ -1.422e-6■■■□□ 14.6
U2AF2P26368 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.612e-6■■■□□ 14.6
U2AF2P26368 EIF3E-212ENST00000521614 1990 ntTSL 22.89□□□□□ -1.952e-6■■■□□ 14.6
U2AF2P26368 EIF3E-214ENST00000522352 611 ntTSL 32.67□□□□□ -1.982e-6■■■□□ 14.6
U2AF2P26368 ALB-211ENST00000505649 1509 ntTSL 56.84□□□□□ -1.312e-29■■■□□ 14.6
U2AF2P26368 ALB-216ENST00000511370 1519 ntTSL 56.36□□□□□ -1.392e-29■■■□□ 14.6
U2AF2P26368 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.158e-7■■■□□ 14.6
U2AF2P26368 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.537e-7■■■□□ 14.6
U2AF2P26368 XPO1-206ENST00000428210 6776 ntTSL 214.74□□□□□ -0.057e-7■■■□□ 14.6
U2AF2P26368 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.817e-7■■■□□ 14.6
U2AF2P26368 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC7.84□□□□□ -1.157e-7■■■□□ 14.6
U2AF2P26368 FAM129A-201ENST00000367511 6928 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.677e-6■■■□□ 14.6
U2AF2P26368 HDLBP-244ENST00000490697 581 ntTSL 419.74■□□□□ 0.755e-22■■■□□ 14.6
U2AF2P26368 MCM3AP-205ENST00000479557 364 ntTSL 27.33□□□□□ -1.249e-10■■■□□ 14.6
U2AF2P26368 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.596e-8■■■□□ 14.6
U2AF2P26368 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.456e-8■■■□□ 14.6
U2AF2P26368 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.68e-7■■■□□ 14.6
U2AF2P26368 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.32■■□□□ 18e-7■■■□□ 14.6
U2AF2P26368 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC9.3□□□□□ -0.928e-7■■■□□ 14.6
U2AF2P26368 CCNL1-218ENST00000476744 1029 ntTSL 28.87□□□□□ -0.993e-10■■■□□ 14.6
U2AF2P26368 DLAT-205ENST00000533297 2118 ntTSL 219.7■□□□□ 0.742e-6■■■□□ 14.6
Retrieved 100 of 36,523 protein–RNA pairs in 156.5 ms