RNA–Protein interactions for RNA: ENST00000406957.5

XPO1-203, Transcript of exportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XPO1, Length 3,479 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPO1-203ENST00000406957 NISCHQ9Y2I1 1504 aa19.1■□□□□ 0.65
XPO1-203ENST00000406957 DCAF8L2P0C7V8 631 aa16.47■□□□□ 0.23
XPO1-203ENST00000406957 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
XPO1-203ENST00000406957 CCDC180Q9P1Z9 1646 aa16.29■□□□□ 0.2
XPO1-203ENST00000406957 ZCCHC6Q5VYS8 1495 aaKnown RBP16.02■□□□□ 0.15
XPO1-203ENST00000406957 ABCC9O60706 1549 aa15.99■□□□□ 0.15
XPO1-203ENST00000406957 SUPT5HO00267 1087 aaKnown RBP15.75■□□□□ 0.11
XPO1-203ENST00000406957 SCRIBQ14160 1630 aa15.55■□□□□ 0.08
XPO1-203ENST00000406957 DCAF1Q9Y4B6 1507 aa15.43■□□□□ 0.06
XPO1-203ENST00000406957 PABPN1Q86U42 306 aaKnown RBP eCLIP15.31■□□□□ 0.04
XPO1-203ENST00000406957 NACADO15069 1562 aa15.23■□□□□ 0.03
XPO1-203ENST00000406957 RB1CC1Q8TDY2 1594 aa15.16■□□□□ 0.02
XPO1-203ENST00000406957 CECR2Q9BXF3 1484 aa15.15■□□□□ 0.02
XPO1-203ENST00000406957 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
XPO1-203ENST00000406957 UNC13AQ9UPW8 1703 aa15.06■□□□□ 0
XPO1-203ENST00000406957 RSF1Q96T23 1441 aaPredicted RBP15□□□□□ -0.01
XPO1-203ENST00000406957 MROH2BQ7Z745 1585 aa14.96□□□□□ -0.01
XPO1-203ENST00000406957 BICRAQ9NZM4 1560 aa14.88□□□□□ -0.03
XPO1-203ENST00000406957 WIZO95785 1651 aa14.87□□□□□ -0.03
XPO1-203ENST00000406957 CHIC1Q5VXU3 224 aa14.87□□□□□ -0.03
XPO1-203ENST00000406957 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
XPO1-203ENST00000406957 FAM9AQ8IZU1 332 aaPredicted RBP14.67□□□□□ -0.06
XPO1-203ENST00000406957 SMARCA4P51532 1647 aa14.66□□□□□ -0.06
XPO1-203ENST00000406957 BAZ1AQ9NRL2 1556 aaPredicted RBP14.65□□□□□ -0.06
XPO1-203ENST00000406957 LOC105371045A0A1W2PR82 267 aa14.63□□□□□ -0.07
XPO1-203ENST00000406957 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
XPO1-203ENST00000406957 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
XPO1-203ENST00000406957 ATAD2BQ9ULI0 1458 aa14.45□□□□□ -0.1
XPO1-203ENST00000406957 DNAJC5BQ9UF47 199 aa14.45□□□□□ -0.1
XPO1-203ENST00000406957 TOP2AP11388 1531 aaKnown RBP14.44□□□□□ -0.1
XPO1-203ENST00000406957 ABCC8Q09428 1581 aa14.43□□□□□ -0.1
XPO1-203ENST00000406957 SMARCA2P51531 1590 aa14.43□□□□□ -0.1
XPO1-203ENST00000406957 EIF4G1Q04637 1599 aaKnown RBP14.41□□□□□ -0.1
XPO1-203ENST00000406957 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
XPO1-203ENST00000406957 PEG3Q9GZU2 1588 aa14.25□□□□□ -0.13
XPO1-203ENST00000406957 CC2D2AQ9P2K1 1620 aa14.25□□□□□ -0.13
XPO1-203ENST00000406957 RUSC2Q8N2Y8 1516 aa14.2□□□□□ -0.14
XPO1-203ENST00000406957 PPARGC1BQ86YN6 1023 aaKnown RBP14.18□□□□□ -0.14
XPO1-203ENST00000406957 SOGA1O94964 1423 aa14.18□□□□□ -0.14
XPO1-203ENST00000406957 NCAPD3P42695 1498 aa14.16□□□□□ -0.14
XPO1-203ENST00000406957 RANGAP1P46060 587 aaPredicted RBP14.14□□□□□ -0.15
XPO1-203ENST00000406957 NESP48681 1621 aa14.1□□□□□ -0.15
XPO1-203ENST00000406957 SYNJ1O43426 1573 aa14.09□□□□□ -0.15
XPO1-203ENST00000406957 TTBK1Q5TCY1 1321 aaPredicted RBP14.09□□□□□ -0.15
XPO1-203ENST00000406957 WRNQ14191 1432 aaPredicted RBP eCLIP14.08□□□□□ -0.152e-7■□□□□ 8.2
XPO1-203ENST00000406957 HMGXB3Q12766 1538 aa14.05□□□□□ -0.16
XPO1-203ENST00000406957 PCGF6Q9BYE7 350 aa14.02□□□□□ -0.17
XPO1-203ENST00000406957 UBTFP17480 764 aaKnown RBP13.97□□□□□ -0.17
XPO1-203ENST00000406957 CSRNP3Q8WYN3 585 aa13.94□□□□□ -0.18
XPO1-203ENST00000406957 CFTRP13569 1480 aa13.94□□□□□ -0.18
XPO1-203ENST00000406957 CADPSQ9ULU8 1353 aa13.94□□□□□ -0.18
XPO1-203ENST00000406957 CUX1P39880 1505 aa13.93□□□□□ -0.18
XPO1-203ENST00000406957 FANCD2Q9BXW9 1451 aa13.84□□□□□ -0.19
XPO1-203ENST00000406957 TOP2BQ02880 1626 aa13.82□□□□□ -0.2
XPO1-203ENST00000406957 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
XPO1-203ENST00000406957 RAPGEF2Q9Y4G8 1499 aa13.8□□□□□ -0.2
XPO1-203ENST00000406957 FGD5Q6ZNL6 1462 aa13.76□□□□□ -0.21
XPO1-203ENST00000406957 CEP162Q5TB80 1403 aa13.75□□□□□ -0.21
XPO1-203ENST00000406957 CUX2O14529 1486 aa13.74□□□□□ -0.21
XPO1-203ENST00000406957 BIVM-ERCC5R4GMW8 1640 aa13.74□□□□□ -0.21
XPO1-203ENST00000406957 KIF21AQ7Z4S6 1674 aa13.71□□□□□ -0.21
XPO1-203ENST00000406957 TDRD9Q8NDG6 1382 aaKnown RBP13.71□□□□□ -0.22
XPO1-203ENST00000406957 URB2Q14146 1524 aaKnown RBP13.71□□□□□ -0.22
XPO1-203ENST00000406957 P3H3Q8IVL6 736 aa13.69□□□□□ -0.22
XPO1-203ENST00000406957 TOPBP1Q92547 1522 aa13.68□□□□□ -0.22
XPO1-203ENST00000406957 GOLGA3Q08378 1498 aa13.67□□□□□ -0.22
XPO1-203ENST00000406957 CEP164Q9UPV0 1460 aa13.67□□□□□ -0.22
XPO1-203ENST00000406957 PRDM2Q13029 1718 aa13.67□□□□□ -0.22
XPO1-203ENST00000406957 POLA1P09884 1462 aaPredicted RBP13.66□□□□□ -0.22
XPO1-203ENST00000406957 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
XPO1-203ENST00000406957 KIF27Q86VH2 1401 aa13.64□□□□□ -0.23
XPO1-203ENST00000406957 IGF1RP08069 1367 aa13.63□□□□□ -0.23
XPO1-203ENST00000406957 EEA1Q15075 1411 aa13.62□□□□□ -0.23
XPO1-203ENST00000406957 TRIM26Q12899 539 aaPredicted RBP13.62□□□□□ -0.23
XPO1-203ENST00000406957 LAMC3Q9Y6N6 1575 aa13.61□□□□□ -0.23
XPO1-203ENST00000406957 PDS5BQ9NTI5 1447 aa13.6□□□□□ -0.23
XPO1-203ENST00000406957 CLIP1P30622 1438 aa13.59□□□□□ -0.23
XPO1-203ENST00000406957 DNMBPQ6XZF7 1577 aa13.58□□□□□ -0.24
XPO1-203ENST00000406957 AQRO60306 1485 aaKnown RBP eCLIP13.57□□□□□ -0.242e-7■■■■□ 19.9
XPO1-203ENST00000406957 PRXQ9BXM0 1461 aa13.57□□□□□ -0.24
XPO1-203ENST00000406957 CARMIL1Q5VZK9 1371 aa13.56□□□□□ -0.24
XPO1-203ENST00000406957 ATP1B4Q9UN42 357 aaPredicted RBP13.56□□□□□ -0.24
XPO1-203ENST00000406957 KIF21BO75037 1637 aa13.55□□□□□ -0.24
XPO1-203ENST00000406957 ERCC6Q03468 1493 aa13.55□□□□□ -0.24
XPO1-203ENST00000406957 ZNF608Q9ULD9 1512 aaPredicted RBP13.53□□□□□ -0.24
XPO1-203ENST00000406957 ARID3CA6NKF2 412 aa13.5□□□□□ -0.25
XPO1-203ENST00000406957 FBLN2P98095 1184 aa13.49□□□□□ -0.25
XPO1-203ENST00000406957 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
XPO1-203ENST00000406957 ARAP1Q96P48 1450 aa13.48□□□□□ -0.25
XPO1-203ENST00000406957 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.47□□□□□ -0.25
XPO1-203ENST00000406957 ABCA10Q8WWZ4 1543 aa13.46□□□□□ -0.25
XPO1-203ENST00000406957 HNRNPUL2Q1KMD3 747 aaKnown RBP13.45□□□□□ -0.26
XPO1-203ENST00000406957 GAPVD1Q14C86 1478 aa13.44□□□□□ -0.26
XPO1-203ENST00000406957 MRC2Q9UBG0 1479 aa13.44□□□□□ -0.26
XPO1-203ENST00000406957 HRCP23327 699 aa13.43□□□□□ -0.26
XPO1-203ENST00000406957 ARHGAP35Q9NRY4 1499 aa13.42□□□□□ -0.26
XPO1-203ENST00000406957 TARBP1Q13395 1621 aaKnown RBP13.4□□□□□ -0.26
XPO1-203ENST00000406957 FHOD3Q2V2M9 1422 aa13.4□□□□□ -0.26
XPO1-203ENST00000406957 ERICH3Q5RHP9 1530 aa13.4□□□□□ -0.26
XPO1-203ENST00000406957 APLP2Q06481 763 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms