RNA–Protein interactions for RNA: ENST00000463852.1

HUWE1-206, Transcript of HECT, UBA and WWE domain containing 1, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene HUWE1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HUWE1-206ENST00000463852 NISCHQ9Y2I1 1504 aa23.87■■□□□ 1.41
HUWE1-206ENST00000463852 ABCC9O60706 1549 aa22.01■■□□□ 1.11
HUWE1-206ENST00000463852 CCDC180Q9P1Z9 1646 aa21.55■■□□□ 1.04
HUWE1-206ENST00000463852 DNAJC5BQ9UF47 199 aa21.03■□□□□ 0.96
HUWE1-206ENST00000463852 RB1CC1Q8TDY2 1594 aa20.67■□□□□ 0.9
HUWE1-206ENST00000463852 NACADO15069 1562 aa20.42■□□□□ 0.86
HUWE1-206ENST00000463852 PABPN1Q86U42 306 aaKnown RBP eCLIP20.42■□□□□ 0.86
HUWE1-206ENST00000463852 UNC13AQ9UPW8 1703 aa20.35■□□□□ 0.85
HUWE1-206ENST00000463852 DCAF8L2P0C7V8 631 aa20.24■□□□□ 0.83
HUWE1-206ENST00000463852 BICRAQ9NZM4 1560 aa20.23■□□□□ 0.83
HUWE1-206ENST00000463852 MYO15BQ96JP2 1530 aa19.98■□□□□ 0.79
HUWE1-206ENST00000463852 CC2D2AQ9P2K1 1620 aa19.84■□□□□ 0.77
HUWE1-206ENST00000463852 ZCCHC6Q5VYS8 1495 aaKnown RBP19.83■□□□□ 0.76
HUWE1-206ENST00000463852 CECR2Q9BXF3 1484 aa19.81■□□□□ 0.76
HUWE1-206ENST00000463852 SCRIBQ14160 1630 aa19.73■□□□□ 0.75
HUWE1-206ENST00000463852 SHROOM4Q9ULL8 1493 aa19.7■□□□□ 0.74
HUWE1-206ENST00000463852 EIF4G1Q04637 1599 aaKnown RBP19.7■□□□□ 0.74
HUWE1-206ENST00000463852 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
HUWE1-206ENST00000463852 DNAJC5Q9H3Z4 198 aa19.42■□□□□ 0.7
HUWE1-206ENST00000463852 CUX2O14529 1486 aa19■□□□□ 0.63
HUWE1-206ENST00000463852 ERCC6Q03468 1493 aa18.92■□□□□ 0.62
HUWE1-206ENST00000463852 NCAPD3P42695 1498 aa18.88■□□□□ 0.61
HUWE1-206ENST00000463852 NESP48681 1621 aa18.85■□□□□ 0.61
HUWE1-206ENST00000463852 ATAD2BQ9ULI0 1458 aa18.83■□□□□ 0.6
HUWE1-206ENST00000463852 SMARCA4P51532 1647 aa18.73■□□□□ 0.59
HUWE1-206ENST00000463852 HMGXB3Q12766 1538 aa18.73■□□□□ 0.59
HUWE1-206ENST00000463852 THOC2Q8NI27 1593 aaKnown RBP18.71■□□□□ 0.59
HUWE1-206ENST00000463852 SMARCA2P51531 1590 aa18.68■□□□□ 0.58
HUWE1-206ENST00000463852 AEBP2Q6ZN18 517 aaPredicted RBP18.67■□□□□ 0.58
HUWE1-206ENST00000463852 BAZ1BQ9UIG0 1483 aaKnown RBP18.58■□□□□ 0.57
HUWE1-206ENST00000463852 KIF21AQ7Z4S6 1674 aa18.57■□□□□ 0.56
HUWE1-206ENST00000463852 CHIC1Q5VXU3 224 aa18.56■□□□□ 0.56
HUWE1-206ENST00000463852 PEG3Q9GZU2 1588 aa18.51■□□□□ 0.55
HUWE1-206ENST00000463852 BAZ1AQ9NRL2 1556 aaPredicted RBP18.51■□□□□ 0.55
HUWE1-206ENST00000463852 LAMC3Q9Y6N6 1575 aa18.5■□□□□ 0.55
HUWE1-206ENST00000463852 TRIM41Q8WV44 630 aa18.47■□□□□ 0.55
HUWE1-206ENST00000463852 MROH2BQ7Z745 1585 aa18.47■□□□□ 0.55
HUWE1-206ENST00000463852 PDS5BQ9NTI5 1447 aa18.36■□□□□ 0.53
HUWE1-206ENST00000463852 WDR62O43379 1518 aa18.31■□□□□ 0.52
HUWE1-206ENST00000463852 MRC2Q9UBG0 1479 aa18.31■□□□□ 0.52
HUWE1-206ENST00000463852 CADPSQ9ULU8 1353 aa18.28■□□□□ 0.52
HUWE1-206ENST00000463852 WIZO95785 1651 aa18.23■□□□□ 0.51
HUWE1-206ENST00000463852 CEP164Q9UPV0 1460 aa18.14■□□□□ 0.5
HUWE1-206ENST00000463852 FANCD2Q9BXW9 1451 aa18.12■□□□□ 0.49
HUWE1-206ENST00000463852 RSF1Q96T23 1441 aaPredicted RBP18.1■□□□□ 0.49
HUWE1-206ENST00000463852 URB2Q14146 1524 aaKnown RBP18.07■□□□□ 0.48
HUWE1-206ENST00000463852 CFTRP13569 1480 aa18.02■□□□□ 0.48
HUWE1-206ENST00000463852 OSCARQ8IYS5 282 aa18■□□□□ 0.47
HUWE1-206ENST00000463852 RIMBP3CA6NJZ7 1639 aa17.98■□□□□ 0.47
HUWE1-206ENST00000463852 RIMBP3BA6NNM3 1639 aa17.98■□□□□ 0.47
HUWE1-206ENST00000463852 RIMBP3Q9UFD9 1639 aa17.98■□□□□ 0.47
HUWE1-206ENST00000463852 TOP2AP11388 1531 aaKnown RBP17.96■□□□□ 0.47
HUWE1-206ENST00000463852 ZNF608Q9ULD9 1512 aaPredicted RBP17.93■□□□□ 0.46
HUWE1-206ENST00000463852 ARHGEF11O15085 1522 aa17.87■□□□□ 0.45
HUWE1-206ENST00000463852 PRDM2Q13029 1718 aa17.83■□□□□ 0.44
HUWE1-206ENST00000463852 EIF4G3O43432 1585 aaKnown RBP17.78■□□□□ 0.44
HUWE1-206ENST00000463852 IFT140Q96RY7 1462 aa17.77■□□□□ 0.44
HUWE1-206ENST00000463852 TOPBP1Q92547 1522 aa17.76■□□□□ 0.43
HUWE1-206ENST00000463852 CHD1O14646 1710 aa17.72■□□□□ 0.43
HUWE1-206ENST00000463852 CCDC88BA6NC98 1476 aa17.72■□□□□ 0.43
HUWE1-206ENST00000463852 SUPT5HO00267 1087 aaKnown RBP17.72■□□□□ 0.43
HUWE1-206ENST00000463852 ARAP1Q96P48 1450 aa17.71■□□□□ 0.43
HUWE1-206ENST00000463852 CYB5RLQ6IPT4 315 aa17.69■□□□□ 0.42
HUWE1-206ENST00000463852 TARBP1Q13395 1621 aaKnown RBP17.66■□□□□ 0.42
HUWE1-206ENST00000463852 AQRO60306 1485 aaKnown RBP eCLIP17.66■□□□□ 0.425e-8■□□□□ 10.1
HUWE1-206ENST00000463852 DNMBPQ6XZF7 1577 aa17.63■□□□□ 0.41
HUWE1-206ENST00000463852 POLA1P09884 1462 aaPredicted RBP17.56■□□□□ 0.4
HUWE1-206ENST00000463852 TRHP20396 242 aaPredicted RBP17.56■□□□□ 0.4
HUWE1-206ENST00000463852 RAD54L2Q9Y4B4 1467 aa17.54■□□□□ 0.4
HUWE1-206ENST00000463852 FBLN2P98095 1184 aa17.52■□□□□ 0.4
HUWE1-206ENST00000463852 ABCC8Q09428 1581 aa17.52■□□□□ 0.39
HUWE1-206ENST00000463852 CLASP1Q7Z460 1538 aa17.5■□□□□ 0.39
HUWE1-206ENST00000463852 TDRD9Q8NDG6 1382 aaKnown RBP17.47■□□□□ 0.39
HUWE1-206ENST00000463852 SNAPC4Q5SXM2 1469 aa17.47■□□□□ 0.39
HUWE1-206ENST00000463852 SOGA1O94964 1423 aa17.4■□□□□ 0.38
HUWE1-206ENST00000463852 FGD5Q6ZNL6 1462 aa17.4■□□□□ 0.38
HUWE1-206ENST00000463852 CUX1P39880 1505 aa17.37■□□□□ 0.37
HUWE1-206ENST00000463852 SYNJ1O43426 1573 aa17.35■□□□□ 0.37
HUWE1-206ENST00000463852 WDR97A6NE52 1622 aa17.33■□□□□ 0.37
HUWE1-206ENST00000463852 MAGI1Q96QZ7 1491 aaPredicted RBP17.32■□□□□ 0.36
HUWE1-206ENST00000463852 ERCC6L2Q5T890 1561 aa17.29■□□□□ 0.36
HUWE1-206ENST00000463852 CHMP7Q8WUX9 453 aaPredicted RBP17.29■□□□□ 0.36
HUWE1-206ENST00000463852 SYNJ2O15056 1496 aa17.29■□□□□ 0.36
HUWE1-206ENST00000463852 GRIN2BQ13224 1484 aa17.29■□□□□ 0.36
HUWE1-206ENST00000463852 PBRM1Q86U86 1689 aa17.28■□□□□ 0.36
HUWE1-206ENST00000463852 GAPVD1Q14C86 1478 aa17.27■□□□□ 0.36
HUWE1-206ENST00000463852 ABCA5Q8WWZ7 1642 aa17.21■□□□□ 0.35
HUWE1-206ENST00000463852 CEP170Q5SW79 1584 aa17.15■□□□□ 0.34
HUWE1-206ENST00000463852 ABCA10Q8WWZ4 1543 aa17.14■□□□□ 0.33
HUWE1-206ENST00000463852 GRIN2AQ12879 1464 aa17.12■□□□□ 0.33
HUWE1-206ENST00000463852 ADAMTS12P58397 1594 aa17.11■□□□□ 0.33
HUWE1-206ENST00000463852 WRNQ14191 1432 aaPredicted RBP eCLIP17.1■□□□□ 0.33
HUWE1-206ENST00000463852 BIVM-ERCC5R4GMW8 1640 aa17.08■□□□□ 0.32
HUWE1-206ENST00000463852 KIF13AQ9H1H9 1805 aa17.07■□□□□ 0.32
HUWE1-206ENST00000463852 NUP160Q12769 1436 aa17.07■□□□□ 0.32
HUWE1-206ENST00000463852 TOP2BQ02880 1626 aa17.07■□□□□ 0.32
HUWE1-206ENST00000463852 SHROOM2Q13796 1616 aa17.07■□□□□ 0.32
HUWE1-206ENST00000463852 FHAD1B1AJZ9 1412 aa16.94■□□□□ 0.3
HUWE1-206ENST00000463852 PRG4Q92954 1404 aaPredicted RBP16.92■□□□□ 0.3
HUWE1-206ENST00000463852 RUSC2Q8N2Y8 1516 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms