RNA–Protein interactions for RNA: ENST00000622533.4

CHD1L-210, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 5

Gene CHD1L, Length 2,937 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-210ENST00000622533 NISCHQ9Y2I1 1504 aa26.14■■□□□ 1.78
CHD1L-210ENST00000622533 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
CHD1L-210ENST00000622533 SHROOM4Q9ULL8 1493 aa22.21■■□□□ 1.15
CHD1L-210ENST00000622533 ZCCHC6Q5VYS8 1495 aaKnown RBP22.18■■□□□ 1.14
CHD1L-210ENST00000622533 HRCP23327 699 aa21.95■■□□□ 1.1
CHD1L-210ENST00000622533 SUPT5HO00267 1087 aaKnown RBP21.93■■□□□ 1.1
CHD1L-210ENST00000622533 PPARGC1BQ86YN6 1023 aaKnown RBP21.66■■□□□ 1.06
CHD1L-210ENST00000622533 DCAF1Q9Y4B6 1507 aa21.59■■□□□ 1.05
CHD1L-210ENST00000622533 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.05
CHD1L-210ENST00000622533 CHIC1Q5VXU3 224 aa21.52■■□□□ 1.04
CHD1L-210ENST00000622533 DCAF8L2P0C7V8 631 aa21.43■■□□□ 1.02
CHD1L-210ENST00000622533 MYO15BQ96JP2 1530 aa21.42■■□□□ 1.02
CHD1L-210ENST00000622533 PELP1Q8IZL8 1130 aaKnown RBP21.12■□□□□ 0.97
CHD1L-210ENST00000622533 ABCC9O60706 1549 aa20.98■□□□□ 0.95
CHD1L-210ENST00000622533 SCAF1Q9H7N4 1312 aaKnown RBP20.87■□□□□ 0.93
CHD1L-210ENST00000622533 LOC105371045A0A1W2PR82 267 aa20.87■□□□□ 0.93
CHD1L-210ENST00000622533 TRIM26Q12899 539 aaPredicted RBP20.75■□□□□ 0.91
CHD1L-210ENST00000622533 RSF1Q96T23 1441 aaPredicted RBP20.73■□□□□ 0.91
CHD1L-210ENST00000622533 SCRIBQ14160 1630 aa20.68■□□□□ 0.9
CHD1L-210ENST00000622533 RB1CC1Q8TDY2 1594 aa20.62■□□□□ 0.89
CHD1L-210ENST00000622533 ZEB1P37275 1124 aaPredicted RBP20.53■□□□□ 0.88
CHD1L-210ENST00000622533 TRIM41Q8WV44 630 aa20.53■□□□□ 0.88
CHD1L-210ENST00000622533 NACADO15069 1562 aa20.49■□□□□ 0.87
CHD1L-210ENST00000622533 NEUROD1Q13562 356 aa20.29■□□□□ 0.84
CHD1L-210ENST00000622533 ACIN1Q9UKV3 1341 aaKnown RBP20.28■□□□□ 0.84
CHD1L-210ENST00000622533 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
CHD1L-210ENST00000622533 MYT1Q01538 1121 aa20.25■□□□□ 0.83
CHD1L-210ENST00000622533 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
CHD1L-210ENST00000622533 FAM9AQ8IZU1 332 aaPredicted RBP20.2■□□□□ 0.82
CHD1L-210ENST00000622533 GTF3C3Q9Y5Q9 886 aa20.18■□□□□ 0.82
CHD1L-210ENST00000622533 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
CHD1L-210ENST00000622533 WIZO95785 1651 aa20.15■□□□□ 0.82
CHD1L-210ENST00000622533 EHMT2Q96KQ7 1210 aa20.09■□□□□ 0.81
CHD1L-210ENST00000622533 EIF4G1Q04637 1599 aaKnown RBP20.05■□□□□ 0.8
CHD1L-210ENST00000622533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.99■□□□□ 0.79
CHD1L-210ENST00000622533 CENPBP07199 599 aaPredicted RBP19.97■□□□□ 0.79
CHD1L-210ENST00000622533 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
CHD1L-210ENST00000622533 DIEXFQ68CQ4 756 aaKnown RBP19.93■□□□□ 0.78
CHD1L-210ENST00000622533 CCER1Q8TC90 406 aaPredicted RBP19.91■□□□□ 0.78
CHD1L-210ENST00000622533 SMARCA4P51532 1647 aa19.87■□□□□ 0.77
CHD1L-210ENST00000622533 WRNQ14191 1432 aaPredicted RBP eCLIP19.85■□□□□ 0.77
CHD1L-210ENST00000622533 CCDC88BA6NC98 1476 aa19.8■□□□□ 0.76
CHD1L-210ENST00000622533 SMARCA2P51531 1590 aa19.8■□□□□ 0.76
CHD1L-210ENST00000622533 EEA1Q15075 1411 aa19.8■□□□□ 0.76
CHD1L-210ENST00000622533 ABCC8Q09428 1581 aa19.74■□□□□ 0.75
CHD1L-210ENST00000622533 YTHDC1Q96MU7 727 aaKnown RBP19.73■□□□□ 0.75
CHD1L-210ENST00000622533 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
CHD1L-210ENST00000622533 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
CHD1L-210ENST00000622533 UNC13AQ9UPW8 1703 aa19.68■□□□□ 0.74
CHD1L-210ENST00000622533 SOGA1O94964 1423 aa19.61■□□□□ 0.73
CHD1L-210ENST00000622533 TTBK1Q5TCY1 1321 aaPredicted RBP19.61■□□□□ 0.73
CHD1L-210ENST00000622533 CSRNP3Q8WYN3 585 aa19.61■□□□□ 0.73
CHD1L-210ENST00000622533 GOLGA3Q08378 1498 aa19.58■□□□□ 0.72
CHD1L-210ENST00000622533 PEG3Q9GZU2 1588 aa19.55■□□□□ 0.72
CHD1L-210ENST00000622533 ZNF316A6NFI3 1004 aaPredicted RBP19.5■□□□□ 0.71
CHD1L-210ENST00000622533 UBTFP17480 764 aaKnown RBP19.5■□□□□ 0.71
CHD1L-210ENST00000622533 CEP164Q9UPV0 1460 aa19.46■□□□□ 0.71
CHD1L-210ENST00000622533 RUSC2Q8N2Y8 1516 aa19.46■□□□□ 0.71
CHD1L-210ENST00000622533 MIER1Q8N108 512 aa19.45■□□□□ 0.7
CHD1L-210ENST00000622533 KIF21BO75037 1637 aa19.45■□□□□ 0.7
CHD1L-210ENST00000622533 BICRAQ9NZM4 1560 aa19.42■□□□□ 0.7
CHD1L-210ENST00000622533 PABPN1Q86U42 306 aaKnown RBP eCLIP19.41■□□□□ 0.72e-6■■□□□ 13.5
CHD1L-210ENST00000622533 BAZ1BQ9UIG0 1483 aaKnown RBP19.36■□□□□ 0.69
CHD1L-210ENST00000622533 SYNJ1O43426 1573 aa19.34■□□□□ 0.69
CHD1L-210ENST00000622533 CLIP1P30622 1438 aa19.31■□□□□ 0.68
CHD1L-210ENST00000622533 VPS8Q8N3P4 1428 aa19.29■□□□□ 0.68
CHD1L-210ENST00000622533 ATAD2BQ9ULI0 1458 aa19.28■□□□□ 0.68
CHD1L-210ENST00000622533 APLP2Q06481 763 aa19.22■□□□□ 0.67
CHD1L-210ENST00000622533 TOP2BQ02880 1626 aa19.18■□□□□ 0.66
CHD1L-210ENST00000622533 BCL11AQ9H165 835 aa19.16■□□□□ 0.66
CHD1L-210ENST00000622533 RAPGEF2Q9Y4G8 1499 aa19.16■□□□□ 0.66
CHD1L-210ENST00000622533 SUPT16HQ9Y5B9 1047 aaKnown RBP19.15■□□□□ 0.66
CHD1L-210ENST00000622533 HNRNPUL2Q1KMD3 747 aaKnown RBP19.14■□□□□ 0.65
CHD1L-210ENST00000622533 ANP32EQ9BTT0 268 aa19.13■□□□□ 0.65
CHD1L-210ENST00000622533 ERICH3Q5RHP9 1530 aa19.12■□□□□ 0.65
CHD1L-210ENST00000622533 BIVM-ERCC5R4GMW8 1640 aa19.12■□□□□ 0.65
CHD1L-210ENST00000622533 CLSPNQ9HAW4 1339 aa19.11■□□□□ 0.65
CHD1L-210ENST00000622533 TSHZ2Q9NRE2 1034 aa19.1■□□□□ 0.65
CHD1L-210ENST00000622533 PRXQ9BXM0 1461 aa19.03■□□□□ 0.64
CHD1L-210ENST00000622533 HMGXB3Q12766 1538 aa18.97■□□□□ 0.63
CHD1L-210ENST00000622533 ARAP1Q96P48 1450 aa18.95■□□□□ 0.62
CHD1L-210ENST00000622533 NCAPD3P42695 1498 aa18.92■□□□□ 0.62
CHD1L-210ENST00000622533 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
CHD1L-210ENST00000622533 DHX57Q6P158 1386 aaKnown RBP18.9■□□□□ 0.62
CHD1L-210ENST00000622533 RRBP1Q9P2E9 1410 aaKnown RBP18.89■□□□□ 0.61
CHD1L-210ENST00000622533 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
CHD1L-210ENST00000622533 CUX1P39880 1505 aa18.87■□□□□ 0.61
CHD1L-210ENST00000622533 BCANQ96GW7 911 aa18.86■□□□□ 0.61
CHD1L-210ENST00000622533 CUX2O14529 1486 aa18.85■□□□□ 0.61
CHD1L-210ENST00000622533 CFTRP13569 1480 aa18.81■□□□□ 0.6
CHD1L-210ENST00000622533 KANK4Q5T7N3 995 aaPredicted RBP18.78■□□□□ 0.6
CHD1L-210ENST00000622533 CCNB3Q8WWL7 1395 aa18.77■□□□□ 0.6
CHD1L-210ENST00000622533 ARHGAP35Q9NRY4 1499 aa18.75■□□□□ 0.59
CHD1L-210ENST00000622533 KCNH8Q96L42 1107 aa18.75■□□□□ 0.59
CHD1L-210ENST00000622533 MAP3K1Q13233 1512 aa18.74■□□□□ 0.59
CHD1L-210ENST00000622533 PRDM2Q13029 1718 aa18.74■□□□□ 0.59
CHD1L-210ENST00000622533 FKBP8Q14318 412 aa18.68■□□□□ 0.58
CHD1L-210ENST00000622533 TIAM1Q13009 1591 aa18.64■□□□□ 0.57
CHD1L-210ENST00000622533 RBM19Q9Y4C8 960 aaKnown RBP18.64■□□□□ 0.57
CHD1L-210ENST00000622533 IGF1RP08069 1367 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms