RNA–Protein interactions for RNA: ENST00000220849.9

EIF3E-201, Transcript of eukaryotic translation initiation factor 3 subunit E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3E, Length 1,543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3E-201ENST00000220849 AEBP2Q6ZN18 517 aaPredicted RBP29.55■■■□□ 2.32
EIF3E-201ENST00000220849 CHIC1Q5VXU3 224 aa27.62■■■□□ 2.01
EIF3E-201ENST00000220849 SENP3Q9H4L4 574 aaPredicted RBP25.36■■□□□ 1.65
EIF3E-201ENST00000220849 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
EIF3E-201ENST00000220849 FOXD1Q16676 465 aa23.69■■□□□ 1.38
EIF3E-201ENST00000220849 POTEDQ86YR6 584 aa23.2■■□□□ 1.3
EIF3E-201ENST00000220849 MSH5O43196 834 aa22.5■■□□□ 1.19
EIF3E-201ENST00000220849 PIAS4Q8N2W9 510 aaPredicted RBP21.95■■□□□ 1.1
EIF3E-201ENST00000220849 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
EIF3E-201ENST00000220849 PLPPR3Q6T4P5 718 aa21.51■■□□□ 1.03
EIF3E-201ENST00000220849 ADRA2BP18089 450 aa21.43■■□□□ 1.02
EIF3E-201ENST00000220849 DMRT2Q9Y5R5 561 aa20■□□□□ 0.79
EIF3E-201ENST00000220849 MAPK8IP2Q13387 824 aaPredicted RBP19.9■□□□□ 0.78
EIF3E-201ENST00000220849 CACNB1Q02641 598 aaPredicted RBP19.71■□□□□ 0.75
EIF3E-201ENST00000220849 SCAF1Q9H7N4 1312 aaKnown RBP19.65■□□□□ 0.74
EIF3E-201ENST00000220849 RNF39Q9H2S5 420 aa19.12■□□□□ 0.65
EIF3E-201ENST00000220849 DCAF8L1A6NGE4 600 aa19.11■□□□□ 0.65
EIF3E-201ENST00000220849 HOXD11P31277 338 aaPredicted RBP18.98■□□□□ 0.63
EIF3E-201ENST00000220849 C1QBPQ07021 282 aaKnown RBP18.81■□□□□ 0.6
EIF3E-201ENST00000220849 PPP4R3CPQ6ZMV5 832 aa18.74■□□□□ 0.59
EIF3E-201ENST00000220849 RNF216Q9NWF9 866 aaPredicted RBP18.62■□□□□ 0.57
EIF3E-201ENST00000220849 CNKSR2Q8WXI2 1034 aa18.59■□□□□ 0.57
EIF3E-201ENST00000220849 DNAJC5BQ9UF47 199 aa18.54■□□□□ 0.56
EIF3E-201ENST00000220849 POTEHQ6S545 545 aa18.03■□□□□ 0.48
EIF3E-201ENST00000220849 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.02■□□□□ 0.47
EIF3E-201ENST00000220849 NCBP3Q53F19 620 aaKnown RBP17.82■□□□□ 0.44
EIF3E-201ENST00000220849 DSG3P32926 999 aa17.64■□□□□ 0.41
EIF3E-201ENST00000220849 U3KPZ7 1027 aaPredicted RBP17.59■□□□□ 0.41
EIF3E-201ENST00000220849 NPM3O75607 178 aaKnown RBP17.54■□□□□ 0.4
EIF3E-201ENST00000220849 CAPN15O75808 1086 aa17.52■□□□□ 0.4
EIF3E-201ENST00000220849 SPINK5Q9NQ38 1064 aaPredicted RBP17.52■□□□□ 0.4
EIF3E-201ENST00000220849 APLP2Q06481 763 aa17.06■□□□□ 0.32
EIF3E-201ENST00000220849 ZNF219Q9P2Y4 722 aaPredicted RBP17.06■□□□□ 0.32
EIF3E-201ENST00000220849 TRHP20396 242 aaPredicted RBP17.05■□□□□ 0.32
EIF3E-201ENST00000220849 ABCB7O75027 752 aa17.04■□□□□ 0.32
EIF3E-201ENST00000220849 SLC4A2P04920 1241 aa16.96■□□□□ 0.3
EIF3E-201ENST00000220849 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
EIF3E-201ENST00000220849 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.85■□□□□ 0.29
EIF3E-201ENST00000220849 HNRNPUL2Q1KMD3 747 aaKnown RBP16.85■□□□□ 0.29
EIF3E-201ENST00000220849 CHRDL2Q6WN34 429 aa16.77■□□□□ 0.28
EIF3E-201ENST00000220849 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
EIF3E-201ENST00000220849 SP7Q8TDD2 431 aaPredicted RBP16.56■□□□□ 0.24
EIF3E-201ENST00000220849 KCNA4P22459 653 aa16.51■□□□□ 0.23
EIF3E-201ENST00000220849 POLA2Q14181 598 aa16.43■□□□□ 0.22
EIF3E-201ENST00000220849 AKT1S1Q96B36 256 aa16.33■□□□□ 0.2
EIF3E-201ENST00000220849 MYCNP04198 464 aaPredicted RBP16.27■□□□□ 0.2
EIF3E-201ENST00000220849 PIP4P2Q8N4L2 257 aa16.21■□□□□ 0.19
EIF3E-201ENST00000220849 REM2Q8IYK8 340 aaPredicted RBP16.14■□□□□ 0.18
EIF3E-201ENST00000220849 ZBTB12Q9Y330 459 aaPredicted RBP16.1■□□□□ 0.17
EIF3E-201ENST00000220849 HAX1O00165 279 aa16.08■□□□□ 0.16
EIF3E-201ENST00000220849 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.15
EIF3E-201ENST00000220849 PITPNM1O00562 1244 aa15.99■□□□□ 0.15
EIF3E-201ENST00000220849 OSCARQ8IYS5 282 aa15.95■□□□□ 0.14
EIF3E-201ENST00000220849 ATF5Q9Y2D1 282 aaPredicted RBP15.89■□□□□ 0.13
EIF3E-201ENST00000220849 EVX2Q03828 476 aa15.84■□□□□ 0.13
EIF3E-201ENST00000220849 FOXD4L1Q9NU39 408 aa15.68■□□□□ 0.1
EIF3E-201ENST00000220849 PRKAR2AP13861 404 aaKnown RBP15.55■□□□□ 0.08
EIF3E-201ENST00000220849 SPDYE2BA6NHP3 402 aa15.54■□□□□ 0.08
EIF3E-201ENST00000220849 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
EIF3E-201ENST00000220849 SPDYE6P0CI01 402 aa15.54■□□□□ 0.08
EIF3E-201ENST00000220849 SPDYE2Q495Y8 402 aa15.54■□□□□ 0.08
EIF3E-201ENST00000220849 LHX8Q68G74 356 aa15.51■□□□□ 0.07
EIF3E-201ENST00000220849 GABBR2O75899 941 aa15.47■□□□□ 0.07
EIF3E-201ENST00000220849 SPDYE1Q8NFV5 336 aaPredicted RBP15.44■□□□□ 0.06
EIF3E-201ENST00000220849 SLC4A1APQ9BWU0 796 aaKnown RBP15.44■□□□□ 0.06
EIF3E-201ENST00000220849 CLEC11AQ9Y240 323 aa15.38■□□□□ 0.05
EIF3E-201ENST00000220849 FBLN2P98095 1184 aa15.36■□□□□ 0.05
EIF3E-201ENST00000220849 ATXN8OSP0DMR3 200 aa15.31■□□□□ 0.04
EIF3E-201ENST00000220849 SSUH2Q9Y2M2 353 aa15.26■□□□□ 0.03
EIF3E-201ENST00000220849 CHADLQ6NUI6 762 aa15.18■□□□□ 0.02
EIF3E-201ENST00000220849 ZNF692Q9BU19 519 aaPredicted RBP15.18■□□□□ 0.02
EIF3E-201ENST00000220849 ZBTB22O15209 634 aa15.17■□□□□ 0.02
EIF3E-201ENST00000220849 MKRN4PQ13434 485 aaPredicted RBP15.16■□□□□ 0.02
EIF3E-201ENST00000220849 POTEIP0CG38 1075 aa15.13■□□□□ 0.01
EIF3E-201ENST00000220849 PLSCR2Q9NRY7 297 aa15.08■□□□□ 0.01
EIF3E-201ENST00000220849 PRR29P0C7W0 189 aa15.05■□□□□ -0
EIF3E-201ENST00000220849 CLCN6P51797 869 aa15.03■□□□□ -0
EIF3E-201ENST00000220849 CD44P16070 742 aaKnown RBP15.01□□□□□ -0.01
EIF3E-201ENST00000220849 PABPN1Q86U42 306 aaKnown RBP eCLIP14.94□□□□□ -0.02
EIF3E-201ENST00000220849 FARP1Q9Y4F1 1045 aaPredicted RBP14.92□□□□□ -0.02
EIF3E-201ENST00000220849 DCBLD2Q96PD2 775 aa14.87□□□□□ -0.03
EIF3E-201ENST00000220849 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
EIF3E-201ENST00000220849 OTUD5Q96G74 571 aa14.71□□□□□ -0.05
EIF3E-201ENST00000220849 ZRANB1Q9UGI0 708 aa14.67□□□□□ -0.06
EIF3E-201ENST00000220849 POTEMA6NI47 508 aa14.63□□□□□ -0.07
EIF3E-201ENST00000220849 GALR2O43603 387 aaPredicted RBP14.61□□□□□ -0.07
EIF3E-201ENST00000220849 POTEB2H3BUK9 544 aa14.61□□□□□ -0.07
EIF3E-201ENST00000220849 POTEGQ6S5H5 508 aa14.56□□□□□ -0.08
EIF3E-201ENST00000220849 CREBZFQ9NS37 354 aa14.53□□□□□ -0.08
EIF3E-201ENST00000220849 PCDH10Q9P2E7 1040 aa14.49□□□□□ -0.09
EIF3E-201ENST00000220849 PAK3O75914 559 aaPredicted RBP14.41□□□□□ -0.1
EIF3E-201ENST00000220849 STAG3Q9UJ98 1225 aa14.41□□□□□ -0.1
EIF3E-201ENST00000220849 PHF12Q96QT6 1004 aa14.41□□□□□ -0.1
EIF3E-201ENST00000220849 PELP1Q8IZL8 1130 aaKnown RBP14.4□□□□□ -0.1
EIF3E-201ENST00000220849 METRNQ9UJH8 293 aa14.31□□□□□ -0.12
EIF3E-201ENST00000220849 ASTLQ6HA08 431 aaPredicted RBP14.3□□□□□ -0.12
EIF3E-201ENST00000220849 POTEJP0CG39 1038 aa14.28□□□□□ -0.12
EIF3E-201ENST00000220849 SLC39A7Q92504 469 aa14.28□□□□□ -0.12
EIF3E-201ENST00000220849 MAMSTRQ6ZN01 415 aa14.27□□□□□ -0.12
EIF3E-201ENST00000220849 C7P10643 843 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms