RNA–Protein interactions for RNA: ENST00000399367.7

ITSN1-212, Transcript of intersectin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ITSN1, Length 5,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-212ENST00000399367 DCAF8L2P0C7V8 631 aa26.57■■□□□ 1.84
ITSN1-212ENST00000399367 SUPT5HO00267 1087 aaKnown RBP24.82■■□□□ 1.56
ITSN1-212ENST00000399367 SHROOM4Q9ULL8 1493 aa24.35■■□□□ 1.49
ITSN1-212ENST00000399367 EHMT2Q96KQ7 1210 aa24.34■■□□□ 1.49
ITSN1-212ENST00000399367 NISCHQ9Y2I1 1504 aa24.22■■□□□ 1.47
ITSN1-212ENST00000399367 APLP2Q06481 763 aa23.71■■□□□ 1.39
ITSN1-212ENST00000399367 FAM9AQ8IZU1 332 aaPredicted RBP23.53■■□□□ 1.36
ITSN1-212ENST00000399367 TTBK1Q5TCY1 1321 aaPredicted RBP23.45■■□□□ 1.34
ITSN1-212ENST00000399367 RANGAP1P46060 587 aaPredicted RBP23.33■■□□□ 1.33
ITSN1-212ENST00000399367 PELP1Q8IZL8 1130 aaKnown RBP23.26■■□□□ 1.31
ITSN1-212ENST00000399367 ATP1B4Q9UN42 357 aaPredicted RBP23.14■■□□□ 1.3
ITSN1-212ENST00000399367 PCGF6Q9BYE7 350 aa22.98■■□□□ 1.27
ITSN1-212ENST00000399367 TRIM41Q8WV44 630 aa22.9■■□□□ 1.26
ITSN1-212ENST00000399367 UBTFP17480 764 aaKnown RBP22.79■■□□□ 1.24
ITSN1-212ENST00000399367 CCER1Q8TC90 406 aaPredicted RBP22.65■■□□□ 1.22
ITSN1-212ENST00000399367 MYT1LQ9UL68 1186 aa22.42■■□□□ 1.18
ITSN1-212ENST00000399367 ERICH6Q7L0X2 663 aa22.42■■□□□ 1.18
ITSN1-212ENST00000399367 PPARGC1BQ86YN6 1023 aaKnown RBP22.38■■□□□ 1.17
ITSN1-212ENST00000399367 CENPBP07199 599 aaPredicted RBP22.38■■□□□ 1.17
ITSN1-212ENST00000399367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.35■■□□□ 1.17
ITSN1-212ENST00000399367 HNRNPUL2Q1KMD3 747 aaKnown RBP22.35■■□□□ 1.17
ITSN1-212ENST00000399367 ZEB1P37275 1124 aaPredicted RBP22.33■■□□□ 1.17
ITSN1-212ENST00000399367 YTHDC1Q96MU7 727 aaKnown RBP22.2■■□□□ 1.14
ITSN1-212ENST00000399367 ITGAEP38570 1179 aa22.19■■□□□ 1.14
ITSN1-212ENST00000399367 NEFLP07196 543 aa22.15■■□□□ 1.14
ITSN1-212ENST00000399367 POLR3GLQ9BT43 218 aa22.11■■□□□ 1.13
ITSN1-212ENST00000399367 CHIC1Q5VXU3 224 aa22.09■■□□□ 1.13
ITSN1-212ENST00000399367 CNGB1Q14028 1251 aaPredicted RBP21.94■■□□□ 1.1
ITSN1-212ENST00000399367 MYT1Q01538 1121 aa21.85■■□□□ 1.09
ITSN1-212ENST00000399367 SLC4A1APQ9BWU0 796 aaKnown RBP21.81■■□□□ 1.08
ITSN1-212ENST00000399367 TRIM26Q12899 539 aaPredicted RBP21.76■■□□□ 1.07
ITSN1-212ENST00000399367 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
ITSN1-212ENST00000399367 PABPN1Q86U42 306 aaKnown RBP eCLIP21.72■■□□□ 1.07
ITSN1-212ENST00000399367 DAXXQ9UER7 740 aaPredicted RBP21.62■■□□□ 1.05
ITSN1-212ENST00000399367 HRCP23327 699 aa21.58■■□□□ 1.05
ITSN1-212ENST00000399367 ABCC9O60706 1549 aa21.54■■□□□ 1.04
ITSN1-212ENST00000399367 FAM50AQ14320 339 aaKnown RBP21.53■■□□□ 1.04
ITSN1-212ENST00000399367 FBLN2P98095 1184 aa21.51■■□□□ 1.03
ITSN1-212ENST00000399367 TRIM52Q96A61 297 aa21.46■■□□□ 1.03
ITSN1-212ENST00000399367 CLSPNQ9HAW4 1339 aa21.3■■□□□ 1
ITSN1-212ENST00000399367 NEUROD1Q13562 356 aa21.3■■□□□ 1
ITSN1-212ENST00000399367 ZNF326Q5BKZ1 582 aaKnown RBP21.29■■□□□ 1
ITSN1-212ENST00000399367 ARID3CA6NKF2 412 aa21.21■□□□□ 0.99
ITSN1-212ENST00000399367 BCANQ96GW7 911 aa21.18■□□□□ 0.98
ITSN1-212ENST00000399367 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
ITSN1-212ENST00000399367 P3H3Q8IVL6 736 aa21.11■□□□□ 0.97
ITSN1-212ENST00000399367 ZNF316A6NFI3 1004 aaPredicted RBP21.08■□□□□ 0.97
ITSN1-212ENST00000399367 DIEXFQ68CQ4 756 aaKnown RBP21.06■□□□□ 0.96
ITSN1-212ENST00000399367 BCL11AQ9H165 835 aa21.01■□□□□ 0.95
ITSN1-212ENST00000399367 ZNF777Q9ULD5 760 aaPredicted RBP20.99■□□□□ 0.95
ITSN1-212ENST00000399367 ZBTB47Q9UFB7 747 aaPredicted RBP20.95■□□□□ 0.94
ITSN1-212ENST00000399367 PLPPR3Q6T4P5 718 aa20.94■□□□□ 0.94
ITSN1-212ENST00000399367 ESF1Q9H501 851 aaKnown RBP20.89■□□□□ 0.94
ITSN1-212ENST00000399367 ANP32CO43423 234 aa20.89■□□□□ 0.93
ITSN1-212ENST00000399367 RTL5Q5HYW3 569 aaPredicted RBP20.89■□□□□ 0.93
ITSN1-212ENST00000399367 NEFMP07197 916 aa20.85■□□□□ 0.93
ITSN1-212ENST00000399367 CANXP27824 592 aaKnown RBP20.83■□□□□ 0.92
ITSN1-212ENST00000399367 CHGAP10645 457 aaKnown RBP20.78■□□□□ 0.92
ITSN1-212ENST00000399367 CDK11AQ9UQ88 783 aaPredicted RBP20.77■□□□□ 0.91
ITSN1-212ENST00000399367 STAG3Q9UJ98 1225 aa20.76■□□□□ 0.91
ITSN1-212ENST00000399367 CSRNP3Q8WYN3 585 aa20.74■□□□□ 0.91
ITSN1-212ENST00000399367 GTF3C3Q9Y5Q9 886 aa20.74■□□□□ 0.91
ITSN1-212ENST00000399367 NPM1P06748 294 aaKnown RBP eCLIP20.73■□□□□ 0.91
ITSN1-212ENST00000399367 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.53■□□□□ 0.881e-6■■■■□ 23.9
ITSN1-212ENST00000399367 SCRIBQ14160 1630 aa20.49■□□□□ 0.87
ITSN1-212ENST00000399367 CHIC2Q9UKJ5 165 aa20.47■□□□□ 0.87
ITSN1-212ENST00000399367 SCAF1Q9H7N4 1312 aaKnown RBP20.42■□□□□ 0.86
ITSN1-212ENST00000399367 TONSLQ96HA7 1378 aa20.41■□□□□ 0.86
ITSN1-212ENST00000399367 ACIN1Q9UKV3 1341 aaKnown RBP20.4■□□□□ 0.86
ITSN1-212ENST00000399367 CHMP7Q8WUX9 453 aaPredicted RBP20.38■□□□□ 0.85
ITSN1-212ENST00000399367 SENP3Q9H4L4 574 aaPredicted RBP20.38■□□□□ 0.85
ITSN1-212ENST00000399367 SALL2Q9Y467 1007 aaPredicted RBP20.37■□□□□ 0.85
ITSN1-212ENST00000399367 A0A0G2JS52 829 aa20.34■□□□□ 0.85
ITSN1-212ENST00000399367 NPM2Q86SE8 214 aaKnown RBP20.34■□□□□ 0.85
ITSN1-212ENST00000399367 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
ITSN1-212ENST00000399367 TSPY4P0CV99 314 aa20.33■□□□□ 0.85
ITSN1-212ENST00000399367 TSPY10P0CW01 314 aa20.33■□□□□ 0.85
ITSN1-212ENST00000399367 KDM2AQ9Y2K7 1162 aa20.32■□□□□ 0.84
ITSN1-212ENST00000399367 FAM9BQ8IZU0 186 aa20.3■□□□□ 0.84
ITSN1-212ENST00000399367 KCNH8Q96L42 1107 aa20.26■□□□□ 0.83
ITSN1-212ENST00000399367 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
ITSN1-212ENST00000399367 ANP32AP39687 249 aaKnown RBP20.24■□□□□ 0.83
ITSN1-212ENST00000399367 ZBTB7CA1YPR0 619 aa20.23■□□□□ 0.83
ITSN1-212ENST00000399367 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
ITSN1-212ENST00000399367 HSP90AA1P07900 732 aaKnown RBP20.23■□□□□ 0.83
ITSN1-212ENST00000399367 C14orf37Q86TY3 774 aa20.19■□□□□ 0.82
ITSN1-212ENST00000399367 MTUS2Q5JR59 1369 aa20.18■□□□□ 0.82
ITSN1-212ENST00000399367 TMC1Q8TDI8 760 aa20.18■□□□□ 0.82
ITSN1-212ENST00000399367 PPP1R15AO75807 674 aaPredicted RBP20.16■□□□□ 0.82
ITSN1-212ENST00000399367 WDR43Q15061 677 aaKnown RBP eCLIP20.14■□□□□ 0.81
ITSN1-212ENST00000399367 FKBP8Q14318 412 aa20.13■□□□□ 0.81
ITSN1-212ENST00000399367 ARID4BQ4LE39 1312 aaPredicted RBP20.11■□□□□ 0.81
ITSN1-212ENST00000399367 UPF2Q9HAU5 1272 aaKnown RBP20.1■□□□□ 0.81
ITSN1-212ENST00000399367 RRP7BPQ9NSQ0 103 aa20.08■□□□□ 0.81
ITSN1-212ENST00000399367 HIRIP3Q9BW71 556 aaPredicted RBP20.05■□□□□ 0.8
ITSN1-212ENST00000399367 PLEKHD1A6NEE1 506 aa20.05■□□□□ 0.8
ITSN1-212ENST00000399367 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.03■□□□□ 0.8
ITSN1-212ENST00000399367 HAP1P54257 671 aaPredicted RBP20.02■□□□□ 0.8
ITSN1-212ENST00000399367 MRS2Q9HD23 443 aa20.02■□□□□ 0.8
ITSN1-212ENST00000399367 RGL3Q3MIN7 710 aa20.01■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms