RNA–Protein interactions for RNA: ENST00000487251.5

LRRC1-203, Transcript of leucine rich repeat containing 1, humanhuman

TSL 2

Gene LRRC1, Length 2,527 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC1-203ENST00000487251 NISCHQ9Y2I1 1504 aa49.39■■■■■ 5.5
LRRC1-203ENST00000487251 CCDC180Q9P1Z9 1646 aa42.53■■■■■ 4.4
LRRC1-203ENST00000487251 ZCCHC6Q5VYS8 1495 aaKnown RBP41.63■■■■■ 4.26
LRRC1-203ENST00000487251 SHROOM4Q9ULL8 1493 aa41.36■■■■■ 4.21
LRRC1-203ENST00000487251 DCAF8L2P0C7V8 631 aa41.01■■■■■ 4.16
LRRC1-203ENST00000487251 DCAF1Q9Y4B6 1507 aa40.57■■■■■ 4.09
LRRC1-203ENST00000487251 SUPT5HO00267 1087 aaKnown RBP40.11■■■■■ 4.01
LRRC1-203ENST00000487251 ABCC9O60706 1549 aa39.97■■■■□ 3.99
LRRC1-203ENST00000487251 MYO15BQ96JP2 1530 aa39.72■■■■□ 3.95
LRRC1-203ENST00000487251 SCRIBQ14160 1630 aa39.62■■■■□ 3.93
LRRC1-203ENST00000487251 NACADO15069 1562 aa39.43■■■■□ 3.9
LRRC1-203ENST00000487251 RB1CC1Q8TDY2 1594 aa38.98■■■■□ 3.83
LRRC1-203ENST00000487251 RSF1Q96T23 1441 aaPredicted RBP38.71■■■■□ 3.79
LRRC1-203ENST00000487251 CHIC1Q5VXU3 224 aa38.62■■■■□ 3.77
LRRC1-203ENST00000487251 CECR2Q9BXF3 1484 aa38.56■■■■□ 3.76
LRRC1-203ENST00000487251 UNC13AQ9UPW8 1703 aa38.53■■■■□ 3.76
LRRC1-203ENST00000487251 MROH2BQ7Z745 1585 aa38.36■■■■□ 3.73
LRRC1-203ENST00000487251 WIZO95785 1651 aa38.16■■■■□ 3.7
LRRC1-203ENST00000487251 BAZ1AQ9NRL2 1556 aaPredicted RBP38.01■■■■□ 3.68
LRRC1-203ENST00000487251 BICRAQ9NZM4 1560 aa37.98■■■■□ 3.67
LRRC1-203ENST00000487251 PABPN1Q86U42 306 aaKnown RBP eCLIP37.98■■■■□ 3.67
LRRC1-203ENST00000487251 SMARCA4P51532 1647 aa37.85■■■■□ 3.65
LRRC1-203ENST00000487251 TOP2AP11388 1531 aaKnown RBP37.53■■■■□ 3.6
LRRC1-203ENST00000487251 TRIM41Q8WV44 630 aa37.44■■■■□ 3.58
LRRC1-203ENST00000487251 LOC105371045A0A1W2PR82 267 aa37.42■■■■□ 3.58
LRRC1-203ENST00000487251 SMARCA2P51531 1590 aa37.31■■■■□ 3.56
LRRC1-203ENST00000487251 CCDC88BA6NC98 1476 aa37.3■■■■□ 3.56
LRRC1-203ENST00000487251 EIF4G1Q04637 1599 aaKnown RBP37.3■■■■□ 3.56
LRRC1-203ENST00000487251 PEG3Q9GZU2 1588 aa37.17■■■■□ 3.54
LRRC1-203ENST00000487251 FAM9AQ8IZU1 332 aaPredicted RBP37.09■■■■□ 3.53
LRRC1-203ENST00000487251 ATAD2BQ9ULI0 1458 aa37.02■■■■□ 3.52
LRRC1-203ENST00000487251 ABCC8Q09428 1581 aa36.95■■■■□ 3.51
LRRC1-203ENST00000487251 BAZ1BQ9UIG0 1483 aaKnown RBP36.87■■■■□ 3.49
LRRC1-203ENST00000487251 EHMT2Q96KQ7 1210 aa36.78■■■■□ 3.48
LRRC1-203ENST00000487251 PCGF6Q9BYE7 350 aa36.48■■■■□ 3.43
LRRC1-203ENST00000487251 NCAPD3P42695 1498 aa36.45■■■■□ 3.42
LRRC1-203ENST00000487251 HMGXB3Q12766 1538 aa36.43■■■■□ 3.42
LRRC1-203ENST00000487251 WRNQ14191 1432 aaPredicted RBP eCLIP36.38■■■■□ 3.41
LRRC1-203ENST00000487251 SOGA1O94964 1423 aa36.37■■■■□ 3.41
LRRC1-203ENST00000487251 SYNJ1O43426 1573 aa36.32■■■■□ 3.4
LRRC1-203ENST00000487251 HRCP23327 699 aa36.28■■■■□ 3.4
LRRC1-203ENST00000487251 RUSC2Q8N2Y8 1516 aa36.27■■■■□ 3.4
LRRC1-203ENST00000487251 CC2D2AQ9P2K1 1620 aa36.07■■■■□ 3.36
LRRC1-203ENST00000487251 CSRNP3Q8WYN3 585 aa36.03■■■■□ 3.36
LRRC1-203ENST00000487251 EEA1Q15075 1411 aa36.03■■■■□ 3.36
LRRC1-203ENST00000487251 TRIM26Q12899 539 aaPredicted RBP36■■■■□ 3.35
LRRC1-203ENST00000487251 TOP2BQ02880 1626 aa35.95■■■■□ 3.34
LRRC1-203ENST00000487251 CFTRP13569 1480 aa35.92■■■■□ 3.34
LRRC1-203ENST00000487251 BIVM-ERCC5R4GMW8 1640 aa35.88■■■■□ 3.33
LRRC1-203ENST00000487251 CEP162Q5TB80 1403 aa35.78■■■■□ 3.32
LRRC1-203ENST00000487251 UBTFP17480 764 aaKnown RBP35.78■■■■□ 3.32
LRRC1-203ENST00000487251 CUX1P39880 1505 aa35.78■■■■□ 3.32
LRRC1-203ENST00000487251 TNIKQ9UKE5 1360 aa35.78■■■■□ 3.32
LRRC1-203ENST00000487251 PRDM2Q13029 1718 aa35.77■■■■□ 3.32
LRRC1-203ENST00000487251 PPARGC1BQ86YN6 1023 aaKnown RBP35.77■■■■□ 3.32
LRRC1-203ENST00000487251 GOLGA3Q08378 1498 aa35.76■■■■□ 3.32
LRRC1-203ENST00000487251 KIF21BO75037 1637 aa35.67■■■■□ 3.3
LRRC1-203ENST00000487251 CADPSQ9ULU8 1353 aa35.66■■■■□ 3.3
LRRC1-203ENST00000487251 CEP164Q9UPV0 1460 aa35.65■■■■□ 3.3
LRRC1-203ENST00000487251 RAPGEF2Q9Y4G8 1499 aa35.54■■■■□ 3.28
LRRC1-203ENST00000487251 NESP48681 1621 aa35.39■■■■□ 3.26
LRRC1-203ENST00000487251 TTBK1Q5TCY1 1321 aaPredicted RBP35.36■■■■□ 3.25
LRRC1-203ENST00000487251 FANCD2Q9BXW9 1451 aa35.34■■■■□ 3.25
LRRC1-203ENST00000487251 KIF27Q86VH2 1401 aa35.32■■■■□ 3.24
LRRC1-203ENST00000487251 DNAJC5BQ9UF47 199 aa35.31■■■■□ 3.24
LRRC1-203ENST00000487251 CLIP1P30622 1438 aa35.3■■■■□ 3.24
LRRC1-203ENST00000487251 PRXQ9BXM0 1461 aa35.3■■■■□ 3.24
LRRC1-203ENST00000487251 RANGAP1P46060 587 aaPredicted RBP35.29■■■■□ 3.24
LRRC1-203ENST00000487251 FGD5Q6ZNL6 1462 aa35.25■■■■□ 3.23
LRRC1-203ENST00000487251 ERICH3Q5RHP9 1530 aa35.23■■■■□ 3.23
LRRC1-203ENST00000487251 CUX2O14529 1486 aa35.19■■■■□ 3.22
LRRC1-203ENST00000487251 LAMC3Q9Y6N6 1575 aa35.08■■■■□ 3.21
LRRC1-203ENST00000487251 DNMBPQ6XZF7 1577 aa35.08■■■■□ 3.21
LRRC1-203ENST00000487251 VPS8Q8N3P4 1428 aa35.04■■■■□ 3.2
LRRC1-203ENST00000487251 TOPBP1Q92547 1522 aa35.04■■■■□ 3.2
LRRC1-203ENST00000487251 IGF1RP08069 1367 aa35.02■■■■□ 3.2
LRRC1-203ENST00000487251 RAD54L2Q9Y4B4 1467 aa34.99■■■■□ 3.19
LRRC1-203ENST00000487251 POLA1P09884 1462 aaPredicted RBP34.96■■■■□ 3.19
LRRC1-203ENST00000487251 URB2Q14146 1524 aaKnown RBP34.91■■■■□ 3.18
LRRC1-203ENST00000487251 ARAP1Q96P48 1450 aa34.9■■■■□ 3.18
LRRC1-203ENST00000487251 KIF21AQ7Z4S6 1674 aa34.88■■■■□ 3.17
LRRC1-203ENST00000487251 CARMIL1Q5VZK9 1371 aa34.85■■■■□ 3.17
LRRC1-203ENST00000487251 ABCA10Q8WWZ4 1543 aa34.82■■■■□ 3.17
LRRC1-203ENST00000487251 PDS5BQ9NTI5 1447 aa34.81■■■■□ 3.16
LRRC1-203ENST00000487251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP34.77■■■■□ 3.16
LRRC1-203ENST00000487251 ZEB1P37275 1124 aaPredicted RBP34.76■■■■□ 3.16
LRRC1-203ENST00000487251 APLP2Q06481 763 aa34.74■■■■□ 3.15
LRRC1-203ENST00000487251 ARHGAP35Q9NRY4 1499 aa34.73■■■■□ 3.15
LRRC1-203ENST00000487251 WDR97A6NE52 1622 aa34.7■■■■□ 3.15
LRRC1-203ENST00000487251 TDRD9Q8NDG6 1382 aaKnown RBP34.58■■■■□ 3.13
LRRC1-203ENST00000487251 CCER1Q8TC90 406 aaPredicted RBP34.57■■■■□ 3.13
LRRC1-203ENST00000487251 CUL7Q14999 1698 aa34.54■■■■□ 3.12
LRRC1-203ENST00000487251 ABCA5Q8WWZ7 1642 aa34.53■■■■□ 3.12
LRRC1-203ENST00000487251 KANK4Q5T7N3 995 aaPredicted RBP34.51■■■■□ 3.12
LRRC1-203ENST00000487251 HNRNPUL2Q1KMD3 747 aaKnown RBP34.47■■■■□ 3.11
LRRC1-203ENST00000487251 GAPVD1Q14C86 1478 aa34.45■■■■□ 3.1
LRRC1-203ENST00000487251 TARBP1Q13395 1621 aaKnown RBP34.44■■■■□ 3.1
LRRC1-203ENST00000487251 P3H3Q8IVL6 736 aa34.4■■■■□ 3.1
LRRC1-203ENST00000487251 CTTNBP2Q8WZ74 1663 aa34.4■■■■□ 3.1
LRRC1-203ENST00000487251 MRC2Q9UBG0 1479 aa34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms