Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 AL390955.2-201ENST00000603032 514 ntBASIC13.77□□□□□ -0.21
CDH20Q9HBT6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
CDH20Q9HBT6 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 AC018892.3-201ENST00000623986 2499 ntBASIC13.76□□□□□ -0.21
CDH20Q9HBT6 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 TSPY26P-202ENST00000565928 3884 ntBASIC13.76□□□□□ -0.21
CDH20Q9HBT6 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 HIST3H2BA-201ENST00000436555 524 ntBASIC13.76□□□□□ -0.21
CDH20Q9HBT6 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 AQP6-203ENST00000551733 849 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 AC010336.2-201ENST00000564226 506 ntBASIC13.76□□□□□ -0.21
CDH20Q9HBT6 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 AL355385.1-201ENST00000606123 409 ntBASIC13.76□□□□□ -0.21
CDH20Q9HBT6 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
CDH20Q9HBT6 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 AC104640.1-201ENST00000562617 2109 ntBASIC13.75□□□□□ -0.21
CDH20Q9HBT6 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
CDH20Q9HBT6 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms