Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
CDH20Q9HBT6 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
CDH20Q9HBT6 AL356512.1-201ENST00000607453 1739 ntBASIC28.83■■■□□ 2.21
CDH20Q9HBT6 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
CDH20Q9HBT6 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
CDH20Q9HBT6 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
CDH20Q9HBT6 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.44■■■□□ 2.14
CDH20Q9HBT6 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.39■■■□□ 2.13
CDH20Q9HBT6 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC28.37■■■□□ 2.13
CDH20Q9HBT6 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.1■■■□□ 2.09
CDH20Q9HBT6 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.07■■■□□ 2.08
CDH20Q9HBT6 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.93■■■□□ 2.06
CDH20Q9HBT6 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.91■■■□□ 2.06
CDH20Q9HBT6 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC27.87■■■□□ 2.05
CDH20Q9HBT6 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.74■■■□□ 2.03
CDH20Q9HBT6 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
CDH20Q9HBT6 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.44■■□□□ 1.98
CDH20Q9HBT6 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.38■■□□□ 1.97
CDH20Q9HBT6 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.31■■□□□ 1.96
CDH20Q9HBT6 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC27.29■■□□□ 1.96
CDH20Q9HBT6 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.2■■□□□ 1.94
CDH20Q9HBT6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
CDH20Q9HBT6 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CDH20Q9HBT6 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.9
CDH20Q9HBT6 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
CDH20Q9HBT6 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.83■■□□□ 1.89
CDH20Q9HBT6 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CDH20Q9HBT6 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC26.74■■□□□ 1.87
CDH20Q9HBT6 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.69■■□□□ 1.86
CDH20Q9HBT6 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
CDH20Q9HBT6 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDH20Q9HBT6 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
CDH20Q9HBT6 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC26.53■■□□□ 1.84
CDH20Q9HBT6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CDH20Q9HBT6 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
CDH20Q9HBT6 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CDH20Q9HBT6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CDH20Q9HBT6 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC26.46■■□□□ 1.83
CDH20Q9HBT6 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
CDH20Q9HBT6 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
CDH20Q9HBT6 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
CDH20Q9HBT6 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.4■■□□□ 1.82
CDH20Q9HBT6 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.32■■□□□ 1.8
CDH20Q9HBT6 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.3■■□□□ 1.8
CDH20Q9HBT6 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
CDH20Q9HBT6 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CDH20Q9HBT6 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.25■■□□□ 1.79
CDH20Q9HBT6 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CDH20Q9HBT6 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC26.15■■□□□ 1.78
CDH20Q9HBT6 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.04■■□□□ 1.76
CDH20Q9HBT6 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26■■□□□ 1.75
CDH20Q9HBT6 AC015813.7-201ENST00000623294 581 ntBASIC25.96■■□□□ 1.75
CDH20Q9HBT6 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC25.93■■□□□ 1.74
CDH20Q9HBT6 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
CDH20Q9HBT6 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
CDH20Q9HBT6 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.84■■□□□ 1.73
CDH20Q9HBT6 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CDH20Q9HBT6 ILK-212ENST00000532063 1617 ntTSL 2 BASIC25.81■■□□□ 1.72
CDH20Q9HBT6 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
CDH20Q9HBT6 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
CDH20Q9HBT6 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.76■■□□□ 1.71
CDH20Q9HBT6 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.74■■□□□ 1.71
CDH20Q9HBT6 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDH20Q9HBT6 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
CDH20Q9HBT6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CDH20Q9HBT6 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
CDH20Q9HBT6 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC25.63■■□□□ 1.69
CDH20Q9HBT6 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDH20Q9HBT6 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CDH20Q9HBT6 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
CDH20Q9HBT6 AC006077.2-201ENST00000623591 457 ntBASIC25.58■■□□□ 1.69
CDH20Q9HBT6 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
CDH20Q9HBT6 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CDH20Q9HBT6 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDH20Q9HBT6 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
CDH20Q9HBT6 ZNRF2P1-201ENST00000441407 443 ntBASIC25.46■■□□□ 1.67
CDH20Q9HBT6 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC25.46■■□□□ 1.67
CDH20Q9HBT6 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
CDH20Q9HBT6 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
CDH20Q9HBT6 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC25.37■■□□□ 1.65
CDH20Q9HBT6 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
CDH20Q9HBT6 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC25.31■■□□□ 1.64
CDH20Q9HBT6 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
CDH20Q9HBT6 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
CDH20Q9HBT6 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
CDH20Q9HBT6 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC25.25■■□□□ 1.63
CDH20Q9HBT6 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
CDH20Q9HBT6 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC25.22■■□□□ 1.63
CDH20Q9HBT6 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
CDH20Q9HBT6 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
CDH20Q9HBT6 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC25.2■■□□□ 1.62
CDH20Q9HBT6 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC25.19■■□□□ 1.62
CDH20Q9HBT6 AC145285.7-201ENST00000614819 1539 ntBASIC25.14■■□□□ 1.62
CDH20Q9HBT6 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC25.14■■□□□ 1.61
CDH20Q9HBT6 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC25.12■■□□□ 1.61
CDH20Q9HBT6 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CDH20Q9HBT6 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
CDH20Q9HBT6 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.08■■□□□ 1.61
CDH20Q9HBT6 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC25.07■■□□□ 1.6
CDH20Q9HBT6 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms