RNA–Protein interactions for RNA: ENST00000393758.6

PDZD4-202, Transcript of PDZ domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDZD4, Length 3,763 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-202ENST00000393758 NISCHQ9Y2I1 1504 aa30.2■■■□□ 2.42
PDZD4-202ENST00000393758 SHROOM4Q9ULL8 1493 aa27.73■■■□□ 2.03
PDZD4-202ENST00000393758 SUPT5HO00267 1087 aaKnown RBP27.65■■■□□ 2.02
PDZD4-202ENST00000393758 DCAF8L2P0C7V8 631 aa27.27■■□□□ 1.96
PDZD4-202ENST00000393758 PCGF6Q9BYE7 350 aa26.65■■□□□ 1.86
PDZD4-202ENST00000393758 HRCP23327 699 aa26.32■■□□□ 1.8
PDZD4-202ENST00000393758 CHIC1Q5VXU3 224 aa26.23■■□□□ 1.79
PDZD4-202ENST00000393758 PPARGC1BQ86YN6 1023 aaKnown RBP26.19■■□□□ 1.78
PDZD4-202ENST00000393758 EHMT2Q96KQ7 1210 aa26.07■■□□□ 1.76
PDZD4-202ENST00000393758 LOC105371045A0A1W2PR82 267 aa25.99■■□□□ 1.75
PDZD4-202ENST00000393758 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
PDZD4-202ENST00000393758 MYO15BQ96JP2 1530 aa25.77■■□□□ 1.72
PDZD4-202ENST00000393758 TRIM26Q12899 539 aaPredicted RBP25.5■■□□□ 1.67
PDZD4-202ENST00000393758 ZCCHC6Q5VYS8 1495 aaKnown RBP25.43■■□□□ 1.66
PDZD4-202ENST00000393758 TRIM41Q8WV44 630 aa25.4■■□□□ 1.66
PDZD4-202ENST00000393758 TTBK1Q5TCY1 1321 aaPredicted RBP25.27■■□□□ 1.64
PDZD4-202ENST00000393758 ZEB1P37275 1124 aaPredicted RBP25.17■■□□□ 1.62
PDZD4-202ENST00000393758 DCAF1Q9Y4B6 1507 aa25.01■■□□□ 1.59
PDZD4-202ENST00000393758 CCER1Q8TC90 406 aaPredicted RBP24.98■■□□□ 1.59
PDZD4-202ENST00000393758 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.84■■□□□ 1.57
PDZD4-202ENST00000393758 PELP1Q8IZL8 1130 aaKnown RBP24.78■■□□□ 1.56
PDZD4-202ENST00000393758 CCDC180Q9P1Z9 1646 aa24.76■■□□□ 1.55
PDZD4-202ENST00000393758 SCAF1Q9H7N4 1312 aaKnown RBP24.65■■□□□ 1.54
PDZD4-202ENST00000393758 YTHDC1Q96MU7 727 aaKnown RBP24.59■■□□□ 1.53
PDZD4-202ENST00000393758 CENPBP07199 599 aaPredicted RBP24.56■■□□□ 1.52
PDZD4-202ENST00000393758 RANGAP1P46060 587 aaPredicted RBP24.45■■□□□ 1.5
PDZD4-202ENST00000393758 UBTFP17480 764 aaKnown RBP24.45■■□□□ 1.5
PDZD4-202ENST00000393758 DIEXFQ68CQ4 756 aaKnown RBP24.45■■□□□ 1.5
PDZD4-202ENST00000393758 GTF3C3Q9Y5Q9 886 aa24.38■■□□□ 1.49
PDZD4-202ENST00000393758 SCRIBQ14160 1630 aa24.37■■□□□ 1.49
PDZD4-202ENST00000393758 RSF1Q96T23 1441 aaPredicted RBP24.35■■□□□ 1.49
PDZD4-202ENST00000393758 NEUROD1Q13562 356 aa24.33■■□□□ 1.49
PDZD4-202ENST00000393758 ACIN1Q9UKV3 1341 aaKnown RBP24.33■■□□□ 1.48
PDZD4-202ENST00000393758 HNRNPUL2Q1KMD3 747 aaKnown RBP24.23■■□□□ 1.47
PDZD4-202ENST00000393758 APLP2Q06481 763 aa24.18■■□□□ 1.46
PDZD4-202ENST00000393758 ABCC9O60706 1549 aa24.12■■□□□ 1.45
PDZD4-202ENST00000393758 RB1CC1Q8TDY2 1594 aa24.07■■□□□ 1.44
PDZD4-202ENST00000393758 ZNF316A6NFI3 1004 aaPredicted RBP23.94■■□□□ 1.42
PDZD4-202ENST00000393758 CECR2Q9BXF3 1484 aa23.93■■□□□ 1.42
PDZD4-202ENST00000393758 CSRNP3Q8WYN3 585 aa23.79■■□□□ 1.4
PDZD4-202ENST00000393758 MIER1Q8N108 512 aa23.74■■□□□ 1.39
PDZD4-202ENST00000393758 ITGAEP38570 1179 aa23.71■■□□□ 1.39
PDZD4-202ENST00000393758 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
PDZD4-202ENST00000393758 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.38
PDZD4-202ENST00000393758 MYT1Q01538 1121 aa23.67■■□□□ 1.38
PDZD4-202ENST00000393758 CEP162Q5TB80 1403 aa23.66■■□□□ 1.38
PDZD4-202ENST00000393758 SOGA1O94964 1423 aa23.54■■□□□ 1.36
PDZD4-202ENST00000393758 WIZO95785 1651 aa23.52■■□□□ 1.36
PDZD4-202ENST00000393758 ABCC8Q09428 1581 aa23.52■■□□□ 1.36
PDZD4-202ENST00000393758 CCDC88BA6NC98 1476 aa23.5■■□□□ 1.35
PDZD4-202ENST00000393758 ATP1B4Q9UN42 357 aaPredicted RBP23.46■■□□□ 1.35
PDZD4-202ENST00000393758 BCANQ96GW7 911 aa23.4■■□□□ 1.34
PDZD4-202ENST00000393758 TNIKQ9UKE5 1360 aa23.39■■□□□ 1.34
PDZD4-202ENST00000393758 RUSC2Q8N2Y8 1516 aa23.3■■□□□ 1.32
PDZD4-202ENST00000393758 CLIP1P30622 1438 aa23.27■■□□□ 1.32
PDZD4-202ENST00000393758 NACADO15069 1562 aa23.25■■□□□ 1.31
PDZD4-202ENST00000393758 GOLGA3Q08378 1498 aa23.23■■□□□ 1.31
PDZD4-202ENST00000393758 BAZ1AQ9NRL2 1556 aaPredicted RBP23.2■■□□□ 1.3
PDZD4-202ENST00000393758 WRNQ14191 1432 aaPredicted RBP eCLIP23.17■■□□□ 1.3
PDZD4-202ENST00000393758 NEFLP07196 543 aa23.17■■□□□ 1.3
PDZD4-202ENST00000393758 EEA1Q15075 1411 aa23.12■■□□□ 1.29
PDZD4-202ENST00000393758 FAM50AQ14320 339 aaKnown RBP23.09■■□□□ 1.29
PDZD4-202ENST00000393758 SUPT16HQ9Y5B9 1047 aaKnown RBP23.04■■□□□ 1.28
PDZD4-202ENST00000393758 HIRIP3Q9BW71 556 aaPredicted RBP23.02■■□□□ 1.28
PDZD4-202ENST00000393758 DDX10Q13206 875 aaKnown RBP23.02■■□□□ 1.28
PDZD4-202ENST00000393758 CEP164Q9UPV0 1460 aa22.99■■□□□ 1.27
PDZD4-202ENST00000393758 FKBP8Q14318 412 aa22.99■■□□□ 1.27
PDZD4-202ENST00000393758 P3H3Q8IVL6 736 aa22.97■■□□□ 1.27
PDZD4-202ENST00000393758 TOP2AP11388 1531 aaKnown RBP22.96■■□□□ 1.27
PDZD4-202ENST00000393758 KANK4Q5T7N3 995 aaPredicted RBP22.95■■□□□ 1.27
PDZD4-202ENST00000393758 VPS8Q8N3P4 1428 aa22.92■■□□□ 1.26
PDZD4-202ENST00000393758 TRIM52Q96A61 297 aa22.91■■□□□ 1.26
PDZD4-202ENST00000393758 ERICH6Q7L0X2 663 aa22.89■■□□□ 1.25
PDZD4-202ENST00000393758 KCNH8Q96L42 1107 aa22.89■■□□□ 1.25
PDZD4-202ENST00000393758 SMARCA2P51531 1590 aa22.85■■□□□ 1.25
PDZD4-202ENST00000393758 CNGB1Q14028 1251 aaPredicted RBP22.84■■□□□ 1.25
PDZD4-202ENST00000393758 RAPGEF2Q9Y4G8 1499 aa22.83■■□□□ 1.24
PDZD4-202ENST00000393758 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
PDZD4-202ENST00000393758 SIN3AQ96ST3 1273 aa22.79■■□□□ 1.24
PDZD4-202ENST00000393758 ANP32CO43423 234 aa22.78■■□□□ 1.24
PDZD4-202ENST00000393758 CLSPNQ9HAW4 1339 aa22.78■■□□□ 1.24
PDZD4-202ENST00000393758 TSHZ2Q9NRE2 1034 aa22.75■■□□□ 1.23
PDZD4-202ENST00000393758 DHX57Q6P158 1386 aaKnown RBP22.75■■□□□ 1.23
PDZD4-202ENST00000393758 IRX6P78412 446 aaPredicted RBP22.68■■□□□ 1.22
PDZD4-202ENST00000393758 ANP32EQ9BTT0 268 aa22.66■■□□□ 1.22
PDZD4-202ENST00000393758 BAZ1BQ9UIG0 1483 aaKnown RBP22.64■■□□□ 1.21
PDZD4-202ENST00000393758 CCNB3Q8WWL7 1395 aa22.62■■□□□ 1.21
PDZD4-202ENST00000393758 POLR3GLQ9BT43 218 aa22.6■■□□□ 1.21
PDZD4-202ENST00000393758 HNRNPUQ00839 825 aaKnown RBP eCLIP22.57■■□□□ 1.2
PDZD4-202ENST00000393758 EIF4G1Q04637 1599 aaKnown RBP22.56■■□□□ 1.2
PDZD4-202ENST00000393758 SYNJ1O43426 1573 aa22.54■■□□□ 1.2
PDZD4-202ENST00000393758 RAB3GAP2Q9H2M9 1393 aa22.53■■□□□ 1.2
PDZD4-202ENST00000393758 KIF21BO75037 1637 aa22.52■■□□□ 1.2
PDZD4-202ENST00000393758 TONSLQ96HA7 1378 aa22.49■■□□□ 1.19
PDZD4-202ENST00000393758 CDK11AQ9UQ88 783 aaPredicted RBP22.48■■□□□ 1.19
PDZD4-202ENST00000393758 ARID3CA6NKF2 412 aa22.46■■□□□ 1.19
PDZD4-202ENST00000393758 KIF27Q86VH2 1401 aa22.46■■□□□ 1.19
PDZD4-202ENST00000393758 RBM19Q9Y4C8 960 aaKnown RBP22.43■■□□□ 1.18
PDZD4-202ENST00000393758 CHIC2Q9UKJ5 165 aa22.39■■□□□ 1.18
PDZD4-202ENST00000393758 ATAD2BQ9ULI0 1458 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms