RNA–Protein interactions for RNA: ENST00000589655.1

RAB3D-202, Transcript of RAB3D, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB3D, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3D-202ENST00000589655 NISCHQ9Y2I1 1504 aa40.98■■■■■ 4.15
RAB3D-202ENST00000589655 ABCC9O60706 1549 aa36.95■■■■□ 3.51
RAB3D-202ENST00000589655 CCDC180Q9P1Z9 1646 aa36.8■■■■□ 3.48
RAB3D-202ENST00000589655 RB1CC1Q8TDY2 1594 aa35.08■■■■□ 3.21
RAB3D-202ENST00000589655 DNAJC5BQ9UF47 199 aa34.86■■■■□ 3.17
RAB3D-202ENST00000589655 NACADO15069 1562 aa34.82■■■■□ 3.16
RAB3D-202ENST00000589655 DCAF8L2P0C7V8 631 aa34.57■■■■□ 3.12
RAB3D-202ENST00000589655 PABPN1Q86U42 306 aaKnown RBP eCLIP34.39■■■■□ 3.1
RAB3D-202ENST00000589655 UNC13AQ9UPW8 1703 aa34.35■■■■□ 3.09
RAB3D-202ENST00000589655 MYO15BQ96JP2 1530 aa34.31■■■■□ 3.08
RAB3D-202ENST00000589655 BICRAQ9NZM4 1560 aa34.16■■■■□ 3.06
RAB3D-202ENST00000589655 ZCCHC6Q5VYS8 1495 aaKnown RBP33.95■■■■□ 3.02
RAB3D-202ENST00000589655 DCAF1Q9Y4B6 1507 aa33.83■■■■□ 3.01
RAB3D-202ENST00000589655 SHROOM4Q9ULL8 1493 aa33.58■■■□□ 2.97
RAB3D-202ENST00000589655 SCRIBQ14160 1630 aa33.54■■■□□ 2.96
RAB3D-202ENST00000589655 CC2D2AQ9P2K1 1620 aa33.38■■■□□ 2.93
RAB3D-202ENST00000589655 CECR2Q9BXF3 1484 aa33.29■■■□□ 2.92
RAB3D-202ENST00000589655 EIF4G1Q04637 1599 aaKnown RBP33.28■■■□□ 2.92
RAB3D-202ENST00000589655 NCAPD3P42695 1498 aa32.18■■■□□ 2.74
RAB3D-202ENST00000589655 ATAD2BQ9ULI0 1458 aa32.07■■■□□ 2.72
RAB3D-202ENST00000589655 DNAJC5Q9H3Z4 198 aa32.03■■■□□ 2.72
RAB3D-202ENST00000589655 SMARCA4P51532 1647 aa32■■■□□ 2.71
RAB3D-202ENST00000589655 SMARCA2P51531 1590 aa31.92■■■□□ 2.7
RAB3D-202ENST00000589655 HMGXB3Q12766 1538 aa31.91■■■□□ 2.7
RAB3D-202ENST00000589655 CUX2O14529 1486 aa31.86■■■□□ 2.69
RAB3D-202ENST00000589655 ERCC6Q03468 1493 aa31.84■■■□□ 2.69
RAB3D-202ENST00000589655 BAZ1AQ9NRL2 1556 aaPredicted RBP31.79■■■□□ 2.68
RAB3D-202ENST00000589655 NESP48681 1621 aa31.75■■■□□ 2.67
RAB3D-202ENST00000589655 BAZ1BQ9UIG0 1483 aaKnown RBP31.71■■■□□ 2.67
RAB3D-202ENST00000589655 PEG3Q9GZU2 1588 aa31.69■■■□□ 2.66
RAB3D-202ENST00000589655 MROH2BQ7Z745 1585 aa31.61■■■□□ 2.65
RAB3D-202ENST00000589655 THOC2Q8NI27 1593 aaKnown RBP31.43■■■□□ 2.62
RAB3D-202ENST00000589655 LAMC3Q9Y6N6 1575 aa31.43■■■□□ 2.62
RAB3D-202ENST00000589655 KIF21AQ7Z4S6 1674 aa31.3■■■□□ 2.6
RAB3D-202ENST00000589655 PDS5BQ9NTI5 1447 aa31.24■■■□□ 2.59
RAB3D-202ENST00000589655 WIZO95785 1651 aa31.21■■■□□ 2.59
RAB3D-202ENST00000589655 CADPSQ9ULU8 1353 aa31.17■■■□□ 2.58
RAB3D-202ENST00000589655 MRC2Q9UBG0 1479 aa31.01■■■□□ 2.55
RAB3D-202ENST00000589655 WDR62O43379 1518 aa30.96■■■□□ 2.55
RAB3D-202ENST00000589655 RSF1Q96T23 1441 aaPredicted RBP30.9■■■□□ 2.54
RAB3D-202ENST00000589655 CEP164Q9UPV0 1460 aa30.84■■■□□ 2.53
RAB3D-202ENST00000589655 FANCD2Q9BXW9 1451 aa30.82■■■□□ 2.53
RAB3D-202ENST00000589655 CFTRP13569 1480 aa30.82■■■□□ 2.52
RAB3D-202ENST00000589655 TOP2AP11388 1531 aaKnown RBP30.78■■■□□ 2.52
RAB3D-202ENST00000589655 URB2Q14146 1524 aaKnown RBP30.62■■■□□ 2.49
RAB3D-202ENST00000589655 TRIM41Q8WV44 630 aa30.53■■■□□ 2.48
RAB3D-202ENST00000589655 CCDC88BA6NC98 1476 aa30.45■■■□□ 2.47
RAB3D-202ENST00000589655 PRDM2Q13029 1718 aa30.45■■■□□ 2.47
RAB3D-202ENST00000589655 OSCARQ8IYS5 282 aa30.38■■■□□ 2.45
RAB3D-202ENST00000589655 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
RAB3D-202ENST00000589655 TOPBP1Q92547 1522 aa30.24■■■□□ 2.43
RAB3D-202ENST00000589655 IFT140Q96RY7 1462 aa30.24■■■□□ 2.43
RAB3D-202ENST00000589655 ABCC8Q09428 1581 aa30.1■■■□□ 2.41
RAB3D-202ENST00000589655 DNMBPQ6XZF7 1577 aa30.1■■■□□ 2.41
RAB3D-202ENST00000589655 EIF4G3O43432 1585 aaKnown RBP30.06■■■□□ 2.4
RAB3D-202ENST00000589655 RIMBP3CA6NJZ7 1639 aa30.04■■■□□ 2.4
RAB3D-202ENST00000589655 RIMBP3BA6NNM3 1639 aa30.04■■■□□ 2.4
RAB3D-202ENST00000589655 RIMBP3Q9UFD9 1639 aa30.04■■■□□ 2.4
RAB3D-202ENST00000589655 TARBP1Q13395 1621 aaKnown RBP30■■■□□ 2.39
RAB3D-202ENST00000589655 AQRO60306 1485 aaKnown RBP eCLIP29.95■■■□□ 2.39
RAB3D-202ENST00000589655 ARHGEF11O15085 1522 aa29.94■■■□□ 2.38
RAB3D-202ENST00000589655 POLA1P09884 1462 aaPredicted RBP29.93■■■□□ 2.38
RAB3D-202ENST00000589655 CHD1O14646 1710 aa29.86■■■□□ 2.37
RAB3D-202ENST00000589655 RAD54L2Q9Y4B4 1467 aa29.84■■■□□ 2.37
RAB3D-202ENST00000589655 SOGA1O94964 1423 aa29.76■■■□□ 2.35
RAB3D-202ENST00000589655 TDRD9Q8NDG6 1382 aaKnown RBP29.75■■■□□ 2.35
RAB3D-202ENST00000589655 FGD5Q6ZNL6 1462 aa29.72■■■□□ 2.35
RAB3D-202ENST00000589655 FBLN2P98095 1184 aa29.71■■■□□ 2.35
RAB3D-202ENST00000589655 CUX1P39880 1505 aa29.7■■■□□ 2.34
RAB3D-202ENST00000589655 CYB5RLQ6IPT4 315 aa29.69■■■□□ 2.34
RAB3D-202ENST00000589655 ARAP1Q96P48 1450 aa29.66■■■□□ 2.34
RAB3D-202ENST00000589655 SNAPC4Q5SXM2 1469 aa29.63■■■□□ 2.33
RAB3D-202ENST00000589655 WDR97A6NE52 1622 aa29.61■■■□□ 2.33
RAB3D-202ENST00000589655 CLASP1Q7Z460 1538 aa29.54■■■□□ 2.32
RAB3D-202ENST00000589655 MAGI1Q96QZ7 1491 aaPredicted RBP29.52■■■□□ 2.32
RAB3D-202ENST00000589655 GRIN2BQ13224 1484 aa29.51■■■□□ 2.31
RAB3D-202ENST00000589655 CHMP7Q8WUX9 453 aaPredicted RBP29.47■■■□□ 2.31
RAB3D-202ENST00000589655 SYNJ1O43426 1573 aa29.44■■■□□ 2.3
RAB3D-202ENST00000589655 SYNJ2O15056 1496 aa29.43■■■□□ 2.3
RAB3D-202ENST00000589655 GAPVD1Q14C86 1478 aa29.4■■■□□ 2.3
RAB3D-202ENST00000589655 PBRM1Q86U86 1689 aa29.4■■■□□ 2.3
RAB3D-202ENST00000589655 ABCA10Q8WWZ4 1543 aa29.37■■■□□ 2.29
RAB3D-202ENST00000589655 SUPT5HO00267 1087 aaKnown RBP29.37■■■□□ 2.29
RAB3D-202ENST00000589655 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
RAB3D-202ENST00000589655 TRHP20396 242 aaPredicted RBP29.35■■■□□ 2.29
RAB3D-202ENST00000589655 WRNQ14191 1432 aaPredicted RBP eCLIP29.19■■■□□ 2.26
RAB3D-202ENST00000589655 BIVM-ERCC5R4GMW8 1640 aa29.16■■■□□ 2.26
RAB3D-202ENST00000589655 TOP2BQ02880 1626 aa29.15■■■□□ 2.26
RAB3D-202ENST00000589655 GRIN2AQ12879 1464 aa29.15■■■□□ 2.26
RAB3D-202ENST00000589655 ADAMTS12P58397 1594 aa29.13■■■□□ 2.25
RAB3D-202ENST00000589655 ERCC6L2Q5T890 1561 aa29.1■■■□□ 2.25
RAB3D-202ENST00000589655 NUP160Q12769 1436 aa29.08■■■□□ 2.25
RAB3D-202ENST00000589655 CEP170Q5SW79 1584 aa29.08■■■□□ 2.25
RAB3D-202ENST00000589655 FHAD1B1AJZ9 1412 aa29.02■■■□□ 2.24
RAB3D-202ENST00000589655 ERICH3Q5RHP9 1530 aa28.98■■■□□ 2.23
RAB3D-202ENST00000589655 SHROOM2Q13796 1616 aa28.97■■■□□ 2.23
RAB3D-202ENST00000589655 PRG4Q92954 1404 aaPredicted RBP28.78■■■□□ 2.2
RAB3D-202ENST00000589655 JPH4Q96JJ6 628 aa28.74■■■□□ 2.19
RAB3D-202ENST00000589655 RUSC2Q8N2Y8 1516 aa28.73■■■□□ 2.19
RAB3D-202ENST00000589655 KIF13AQ9H1H9 1805 aa28.64■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms