Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 AC104794.3-201ENST00000566840 1248 ntBASIC14.26□□□□□ -0.13
LRRC46Q96FV0 5S_rRNA.22-201ENST00000614916 106 ntBASIC14.26□□□□□ -0.13
LRRC46Q96FV0 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 U82695.1-201ENST00000635752 1889 ntBASIC14.26□□□□□ -0.13
LRRC46Q96FV0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRC46Q96FV0 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 TIMM17BP1-201ENST00000545713 516 ntBASIC14.25□□□□□ -0.13
LRRC46Q96FV0 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.25□□□□□ -0.13
LRRC46Q96FV0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LRRC46Q96FV0 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRC46Q96FV0 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 1205.6 ms