RNA–Protein interactions for RNA: ENST00000247668.6

TRAF2-201, Transcript of TNF receptor associated factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF2, Length 2,264 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF2-201ENST00000247668 NISCHQ9Y2I1 1504 aa38.7■■■■□ 3.79
TRAF2-201ENST00000247668 CCDC180Q9P1Z9 1646 aa33.39■■■□□ 2.94
TRAF2-201ENST00000247668 ZCCHC6Q5VYS8 1495 aaKnown RBP32.5■■■□□ 2.79
TRAF2-201ENST00000247668 DCAF8L2P0C7V8 631 aa32.46■■■□□ 2.79
TRAF2-201ENST00000247668 SHROOM4Q9ULL8 1493 aa32.17■■■□□ 2.74
TRAF2-201ENST00000247668 ABCC9O60706 1549 aa32.05■■■□□ 2.72
TRAF2-201ENST00000247668 DCAF1Q9Y4B6 1507 aa31.72■■■□□ 2.67
TRAF2-201ENST00000247668 MYO15BQ96JP2 1530 aa31.25■■■□□ 2.59
TRAF2-201ENST00000247668 NACADO15069 1562 aa31.17■■■□□ 2.58
TRAF2-201ENST00000247668 SCRIBQ14160 1630 aa31.16■■■□□ 2.58
TRAF2-201ENST00000247668 SUPT5HO00267 1087 aaKnown RBP30.96■■■□□ 2.55
TRAF2-201ENST00000247668 RB1CC1Q8TDY2 1594 aa30.92■■■□□ 2.54
TRAF2-201ENST00000247668 UNC13AQ9UPW8 1703 aa30.46■■■□□ 2.47
TRAF2-201ENST00000247668 PABPN1Q86U42 306 aaKnown RBP eCLIP30.44■■■□□ 2.465e-6■■■■□ 22.2
TRAF2-201ENST00000247668 CECR2Q9BXF3 1484 aa30.34■■■□□ 2.45
TRAF2-201ENST00000247668 BICRAQ9NZM4 1560 aa30.2■■■□□ 2.43
TRAF2-201ENST00000247668 RSF1Q96T23 1441 aaPredicted RBP30.2■■■□□ 2.42
TRAF2-201ENST00000247668 MROH2BQ7Z745 1585 aa30.07■■■□□ 2.4
TRAF2-201ENST00000247668 WIZO95785 1651 aa29.82■■■□□ 2.36
TRAF2-201ENST00000247668 BAZ1AQ9NRL2 1556 aaPredicted RBP29.78■■■□□ 2.36
TRAF2-201ENST00000247668 SMARCA4P51532 1647 aa29.7■■■□□ 2.35
TRAF2-201ENST00000247668 CHIC1Q5VXU3 224 aa29.54■■■□□ 2.32
TRAF2-201ENST00000247668 TOP2AP11388 1531 aaKnown RBP29.29■■■□□ 2.28
TRAF2-201ENST00000247668 ATAD2BQ9ULI0 1458 aa29.27■■■□□ 2.28
TRAF2-201ENST00000247668 EIF4G1Q04637 1599 aaKnown RBP29.24■■■□□ 2.27
TRAF2-201ENST00000247668 CCDC88BA6NC98 1476 aa29.2■■■□□ 2.26
TRAF2-201ENST00000247668 PEG3Q9GZU2 1588 aa29.19■■■□□ 2.26
TRAF2-201ENST00000247668 SMARCA2P51531 1590 aa29.13■■■□□ 2.25
TRAF2-201ENST00000247668 BAZ1BQ9UIG0 1483 aaKnown RBP29.08■■■□□ 2.25
TRAF2-201ENST00000247668 NCAPD3P42695 1498 aa28.9■■■□□ 2.22
TRAF2-201ENST00000247668 TRIM41Q8WV44 630 aa28.9■■■□□ 2.22
TRAF2-201ENST00000247668 CC2D2AQ9P2K1 1620 aa28.83■■■□□ 2.21
TRAF2-201ENST00000247668 HMGXB3Q12766 1538 aa28.75■■■□□ 2.19
TRAF2-201ENST00000247668 ABCC8Q09428 1581 aa28.74■■■□□ 2.19
TRAF2-201ENST00000247668 FAM9AQ8IZU1 332 aaPredicted RBP28.67■■■□□ 2.18
TRAF2-201ENST00000247668 LOC105371045A0A1W2PR82 267 aa28.67■■■□□ 2.18
TRAF2-201ENST00000247668 DNAJC5BQ9UF47 199 aa28.64■■■□□ 2.18
TRAF2-201ENST00000247668 EHMT2Q96KQ7 1210 aa28.49■■■□□ 2.15
TRAF2-201ENST00000247668 WRNQ14191 1432 aaPredicted RBP eCLIP28.36■■■□□ 2.13
TRAF2-201ENST00000247668 CFTRP13569 1480 aa28.34■■■□□ 2.13
TRAF2-201ENST00000247668 SYNJ1O43426 1573 aa28.3■■■□□ 2.12
TRAF2-201ENST00000247668 SOGA1O94964 1423 aa28.26■■■□□ 2.11
TRAF2-201ENST00000247668 CADPSQ9ULU8 1353 aa28.26■■■□□ 2.11
TRAF2-201ENST00000247668 NESP48681 1621 aa28.22■■■□□ 2.11
TRAF2-201ENST00000247668 RUSC2Q8N2Y8 1516 aa28.21■■■□□ 2.11
TRAF2-201ENST00000247668 CUX1P39880 1505 aa28.06■■■□□ 2.08
TRAF2-201ENST00000247668 TOP2BQ02880 1626 aa28■■■□□ 2.07
TRAF2-201ENST00000247668 FANCD2Q9BXW9 1451 aa27.96■■■□□ 2.07
TRAF2-201ENST00000247668 CSRNP3Q8WYN3 585 aa27.93■■■□□ 2.06
TRAF2-201ENST00000247668 PRDM2Q13029 1718 aa27.92■■■□□ 2.06
TRAF2-201ENST00000247668 BIVM-ERCC5R4GMW8 1640 aa27.91■■■□□ 2.06
TRAF2-201ENST00000247668 LAMC3Q9Y6N6 1575 aa27.8■■■□□ 2.04
TRAF2-201ENST00000247668 EEA1Q15075 1411 aa27.74■■■□□ 2.03
TRAF2-201ENST00000247668 FGD5Q6ZNL6 1462 aa27.72■■■□□ 2.03
TRAF2-201ENST00000247668 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.02
TRAF2-201ENST00000247668 UBTFP17480 764 aaKnown RBP27.69■■■□□ 2.02
TRAF2-201ENST00000247668 PDS5BQ9NTI5 1447 aa27.67■■■□□ 2.02
TRAF2-201ENST00000247668 URB2Q14146 1524 aaKnown RBP27.66■■■□□ 2.02
TRAF2-201ENST00000247668 TOPBP1Q92547 1522 aa27.65■■■□□ 2.02
TRAF2-201ENST00000247668 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
TRAF2-201ENST00000247668 RAD54L2Q9Y4B4 1467 aa27.64■■■□□ 2.02
TRAF2-201ENST00000247668 RAPGEF2Q9Y4G8 1499 aa27.6■■■□□ 2.01
TRAF2-201ENST00000247668 CUX2O14529 1486 aa27.59■■■□□ 2.01
TRAF2-201ENST00000247668 DNMBPQ6XZF7 1577 aa27.59■■■□□ 2.01
TRAF2-201ENST00000247668 POLA1P09884 1462 aaPredicted RBP27.58■■■□□ 2.01
TRAF2-201ENST00000247668 KIF27Q86VH2 1401 aa27.56■■■□□ 2
TRAF2-201ENST00000247668 GOLGA3Q08378 1498 aa27.54■■■□□ 2
TRAF2-201ENST00000247668 RANGAP1P46060 587 aaPredicted RBP27.54■■■□□ 2
TRAF2-201ENST00000247668 TNIKQ9UKE5 1360 aa27.51■■□□□ 1.99
TRAF2-201ENST00000247668 CEP162Q5TB80 1403 aa27.48■■□□□ 1.99
TRAF2-201ENST00000247668 PPARGC1BQ86YN6 1023 aaKnown RBP27.47■■□□□ 1.99
TRAF2-201ENST00000247668 KIF21BO75037 1637 aa27.46■■□□□ 1.99
TRAF2-201ENST00000247668 IGF1RP08069 1367 aa27.46■■□□□ 1.99
TRAF2-201ENST00000247668 PRXQ9BXM0 1461 aa27.44■■□□□ 1.98
TRAF2-201ENST00000247668 TDRD9Q8NDG6 1382 aaKnown RBP27.39■■□□□ 1.98
TRAF2-201ENST00000247668 PCGF6Q9BYE7 350 aa27.37■■□□□ 1.97
TRAF2-201ENST00000247668 ABCA10Q8WWZ4 1543 aa27.35■■□□□ 1.97
TRAF2-201ENST00000247668 MRC2Q9UBG0 1479 aa27.32■■□□□ 1.96
TRAF2-201ENST00000247668 ERCC6Q03468 1493 aa27.31■■□□□ 1.96
TRAF2-201ENST00000247668 CARMIL1Q5VZK9 1371 aa27.28■■□□□ 1.96
TRAF2-201ENST00000247668 ERICH3Q5RHP9 1530 aa27.23■■□□□ 1.95
TRAF2-201ENST00000247668 CLIP1P30622 1438 aa27.22■■□□□ 1.95
TRAF2-201ENST00000247668 TTBK1Q5TCY1 1321 aaPredicted RBP27.22■■□□□ 1.95
TRAF2-201ENST00000247668 TARBP1Q13395 1621 aaKnown RBP27.2■■□□□ 1.94
TRAF2-201ENST00000247668 WDR97A6NE52 1622 aa27.19■■□□□ 1.94
TRAF2-201ENST00000247668 AQRO60306 1485 aaKnown RBP eCLIP27.18■■□□□ 1.944e-7■■■■■ 43.5
TRAF2-201ENST00000247668 WDR62O43379 1518 aa27.15■■□□□ 1.94
TRAF2-201ENST00000247668 GAPVD1Q14C86 1478 aa27.15■■□□□ 1.94
TRAF2-201ENST00000247668 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
TRAF2-201ENST00000247668 ABCA5Q8WWZ7 1642 aa27.11■■□□□ 1.93
TRAF2-201ENST00000247668 THOC2Q8NI27 1593 aaKnown RBP27.09■■□□□ 1.93
TRAF2-201ENST00000247668 TRIM26Q12899 539 aaPredicted RBP27.06■■□□□ 1.92
TRAF2-201ENST00000247668 ARAP1Q96P48 1450 aa26.97■■□□□ 1.91
TRAF2-201ENST00000247668 IFT140Q96RY7 1462 aa26.97■■□□□ 1.91
TRAF2-201ENST00000247668 P3H3Q8IVL6 736 aa26.97■■□□□ 1.91
TRAF2-201ENST00000247668 ARHGAP35Q9NRY4 1499 aa26.95■■□□□ 1.9
TRAF2-201ENST00000247668 VPS8Q8N3P4 1428 aa26.93■■□□□ 1.9
TRAF2-201ENST00000247668 CUL7Q14999 1698 aa26.92■■□□□ 1.9
TRAF2-201ENST00000247668 PBRM1Q86U86 1689 aa26.87■■□□□ 1.89
TRAF2-201ENST00000247668 GRIN2BQ13224 1484 aa26.84■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms