Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 AL355987.2-201ENST00000471502 561 ntTSL 4 BASIC12.36□□□□□ -0.437e-7■□□□□ 11
RPS3P23396 WDR13-211ENST00000495575 547 ntTSL 212.2□□□□□ -0.463e-7■□□□□ 11
RPS3P23396 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC10.37□□□□□ -0.757e-7■□□□□ 11
RPS3P23396 TGM2-205ENST00000469269 3467 ntTSL 210.29□□□□□ -0.767e-7■□□□□ 11
RPS3P23396 AFDN-221ENST00000511637 5999 ntTSL 1 (best)9.62□□□□□ -0.877e-7■□□□□ 11
RPS3P23396 AFDN-204ENST00000366809 4839 ntTSL 1 (best)9.54□□□□□ -0.887e-7■□□□□ 11
RPS3P23396 ATP2A2-202ENST00000313432 5575 ntTSL 1 (best)8.23□□□□□ -1.093e-7■□□□□ 11
RPS3P23396 AFDN-215ENST00000497596 728 ntTSL 27.41□□□□□ -1.227e-7■□□□□ 11
RPS3P23396 TRRAP-202ENST00000359863 12677 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.37e-7■□□□□ 11
RPS3P23396 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC6.93□□□□□ -1.37e-7■□□□□ 11
RPS3P23396 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.317e-7■□□□□ 11
RPS3P23396 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.487e-7■□□□□ 11
RPS3P23396 ATP2A2-212ENST00000553144 264 ntTSL 1 (best)3.74□□□□□ -1.813e-7■□□□□ 11
RPS3P23396 MIR3609-201ENST00000582661 80 ntBASIC1.97□□□□□ -2.097e-7■□□□□ 11
RPS3P23396 HMGCR-204ENST00000504466 1107 ntTSL 25.09□□□□□ -1.598e-8■□□□□ 11
RPS3P23396 RPL8-203ENST00000525232 1007 ntTSL 1 (best)19.99■□□□□ 0.792e-20■□□□□ 11
RPS3P23396 MYC-203ENST00000517291 1023 ntTSL 1 (best)13.63□□□□□ -0.237e-16■□□□□ 11
RPS3P23396 SPN-203ENST00000436527 1197 ntAPPRIS ALT2 TSL 1 (best)17.46■□□□□ 0.393e-6■□□□□ 11
RPS3P23396 EIF3H-211ENST00000522800 635 ntTSL 38.4□□□□□ -1.069e-7■□□□□ 11
RPS3P23396 LRP1-208ENST00000555124 550 ntTSL 414.51□□□□□ -0.096e-8■□□□□ 11
RPS3P23396 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.97■□□□□ 0.633e-8■□□□□ 11
RPS3P23396 TARDBP-203ENST00000439080 1388 ntTSL 216.59■□□□□ 0.253e-8■□□□□ 11
RPS3P23396 TARDBP-225ENST00000621715 816 ntTSL 315.86■□□□□ 0.133e-8■□□□□ 11
RPS3P23396 TARDBP-231ENST00000639599 1283 ntTSL 514.05□□□□□ -0.163e-8■□□□□ 11
RPS3P23396 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.223e-8■□□□□ 11
RPS3P23396 TARDBP-204ENST00000472476 1001 ntTSL 513.59□□□□□ -0.233e-8■□□□□ 11
RPS3P23396 TARDBP-207ENST00000476201 929 ntTSL 513.59□□□□□ -0.233e-8■□□□□ 11
RPS3P23396 TARDBP-215ENST00000613864 584 ntTSL 413.59□□□□□ -0.233e-8■□□□□ 11
RPS3P23396 TARDBP-230ENST00000639083 2269 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.73e-8■□□□□ 11
RPS3P23396 AL109811.4-201ENST00000614757 1793 ntTSL 5 BASIC9.36□□□□□ -0.913e-8■□□□□ 11
RPS3P23396 TARDBP-205ENST00000473118 701 ntTSL 37.65□□□□□ -1.183e-8■□□□□ 11
RPS3P23396 SEC31A-210ENST00000503058 706 ntTSL 56.42□□□□□ -1.383e-7■□□□□ 11
RPS3P23396 AHNAK-206ENST00000530285 580 ntAPPRIS ALT2 TSL 313.66□□□□□ -0.226e-7■□□□□ 11
RPS3P23396 PTMS-206ENST00000540874 501 ntTSL 218.02■□□□□ 0.481e-6■□□□□ 11
RPS3P23396 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC12.49□□□□□ -0.411e-8■□□□□ 11
RPS3P23396 EEF1D-249ENST00000533749 633 ntTSL 517.23■□□□□ 0.356e-7■□□□□ 11
RPS3P23396 FRAS1-202ENST00000502446 2217 ntTSL 512.54□□□□□ -0.43e-6■□□□□ 11
RPS3P23396 WWTR1-202ENST00000460517 604 ntTSL 319.99■□□□□ 0.794e-7■□□□□ 11
RPS3P23396 SF3B2-209ENST00000530322 1163 ntTSL 516.43■□□□□ 0.225e-17■□□□□ 11
RPS3P23396 WWTR1-208ENST00000475579 578 ntTSL 415.71■□□□□ 0.114e-7■□□□□ 11
RPS3P23396 SF3B2-214ENST00000533595 1081 ntTSL 514.31□□□□□ -0.125e-17■□□□□ 11
RPS3P23396 SF3B2-203ENST00000524627 841 ntTSL 312.08□□□□□ -0.485e-17■□□□□ 11
RPS3P23396 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.812e-8■□□□□ 11
RPS3P23396 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC9.41□□□□□ -0.92e-8■□□□□ 11
RPS3P23396 RBM12-204ENST00000424458 1068 ntTSL 224.71■■□□□ 1.559e-21■□□□□ 11
RPS3P23396 PDXK-214ENST00000476084 602 ntTSL 321.62■■□□□ 1.057e-7■□□□□ 11
RPS3P23396 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.99■□□□□ 0.957e-7■□□□□ 11
RPS3P23396 PDXK-206ENST00000398085 796 ntTSL 320.97■□□□□ 0.957e-7■□□□□ 11
RPS3P23396 PDXK-212ENST00000470029 583 ntTSL 319.03■□□□□ 0.647e-7■□□□□ 11
RPS3P23396 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 07e-7■□□□□ 11
RPS3P23396 GNL2-206ENST00000488496 539 ntTSL 214.28□□□□□ -0.127e-7■□□□□ 11
RPS3P23396 RBBP4-205ENST00000445722 580 ntTSL 214.22□□□□□ -0.137e-10■□□□□ 11
RPS3P23396 PYCR1-215ENST00000585244 578 ntTSL 413.62□□□□□ -0.237e-7■□□□□ 11
RPS3P23396 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC13.21□□□□□ -0.297e-7■□□□□ 11
RPS3P23396 RBBP4-203ENST00000401893 762 ntTSL 212.18□□□□□ -0.467e-10■□□□□ 11
RPS3P23396 RBM12-206ENST00000435161 565 ntTSL 412.06□□□□□ -0.489e-21■□□□□ 11
RPS3P23396 PDXK-201ENST00000291565 7366 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.497e-7■□□□□ 11
RPS3P23396 RBBP4-213ENST00000490500 632 ntTSL 311.85□□□□□ -0.517e-10■□□□□ 11
RPS3P23396 RBM12-205ENST00000431148 583 ntTSL 411.44□□□□□ -0.589e-21■□□□□ 11
RPS3P23396 CDCA8-201ENST00000327331 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.597e-7■□□□□ 11
RPS3P23396 SUGT1-202ENST00000343788 1217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.737e-7■□□□□ 11
RPS3P23396 ENO2-203ENST00000534977 351 ntTSL 310.36□□□□□ -0.757e-7■□□□□ 11
RPS3P23396 RBBP4-216ENST00000525506 501 ntTSL 210.19□□□□□ -0.787e-10■□□□□ 11
RPS3P23396 CCT3-202ENST00000368256 1063 ntTSL 39.95□□□□□ -0.821e-6■□□□□ 11
RPS3P23396 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.897e-7■□□□□ 11
RPS3P23396 RBBP4-211ENST00000477563 544 ntTSL 57.32□□□□□ -1.247e-10■□□□□ 11
RPS3P23396 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.877e-7■□□□□ 11
RPS3P23396 ERBB3-206ENST00000548709 551 ntTSL 26.87□□□□□ -1.315e-8■□□□□ 11
RPS3P23396 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.221e-6■□□□□ 11
RPS3P23396 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.721e-6■□□□□ 11
RPS3P23396 ACSL3-205ENST00000421680 639 ntTSL 32.66□□□□□ -1.981e-7■□□□□ 10.9
RPS3P23396 APOB-201ENST00000233242 14121 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.115e-47■□□□□ 10.9
RPS3P23396 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.188e-8■□□□□ 10.9
RPS3P23396 SGSH-210ENST00000573150 2612 ntTSL 213.71□□□□□ -0.218e-8■□□□□ 10.9
RPS3P23396 SGSH-213ENST00000575282 5562 ntTSL 1 (best)13.56□□□□□ -0.248e-8■□□□□ 10.9
RPS3P23396 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC17.41■□□□□ 0.384e-6■□□□□ 10.9
RPS3P23396 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.59□□□□□ -0.391e-6■□□□□ 10.9
RPS3P23396 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.511e-6■□□□□ 10.9
RPS3P23396 ATP7B-201ENST00000242839 6638 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.671e-6■□□□□ 10.9
RPS3P23396 ATP7B-204ENST00000400370 3252 ntTSL 1 (best) BASIC10□□□□□ -0.811e-6■□□□□ 10.9
RPS3P23396 ATP7B-205ENST00000418097 4340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.91e-6■□□□□ 10.9
RPS3P23396 ATP7B-211ENST00000634308 4321 ntTSL 1 (best)9.32□□□□□ -0.921e-6■□□□□ 10.9
RPS3P23396 ATP7B-215ENST00000634844 4398 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.931e-6■□□□□ 10.9
RPS3P23396 ATP7B-206ENST00000448424 6404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.991e-6■□□□□ 10.9
RPS3P23396 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.427e-8■□□□□ 10.9
RPS3P23396 SLC39A14-206ENST00000517552 576 ntTSL 316.18■□□□□ 0.182e-24■□□□□ 10.9
RPS3P23396 SLC39A14-208ENST00000519960 467 ntTSL 46.57□□□□□ -1.362e-24■□□□□ 10.9
RPS3P23396 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.81■□□□□ 0.66e-9■□□□□ 10.9
RPS3P23396 GORASP2-209ENST00000493692 951 ntTSL 512.51□□□□□ -0.412e-7■□□□□ 10.9
RPS3P23396 GORASP2-206ENST00000471559 812 ntTSL 48.14□□□□□ -1.112e-7■□□□□ 10.9
RPS3P23396 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.482e-13■□□□□ 10.9
RPS3P23396 ITGA6-204ENST00000412899 970 ntTSL 1 (best)17.77■□□□□ 0.442e-13■□□□□ 10.9
RPS3P23396 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.65□□□□□ -0.222e-13■□□□□ 10.9
RPS3P23396 ITGA6-203ENST00000409532 3544 ntTSL 2 BASIC10.93□□□□□ -0.662e-13■□□□□ 10.9
RPS3P23396 IGF1R-205ENST00000558751 548 ntTSL 410.73□□□□□ -0.692e-6■□□□□ 10.9
RPS3P23396 ITGA6-207ENST00000458358 3261 ntTSL 5 BASIC9.45□□□□□ -0.92e-13■□□□□ 10.9
RPS3P23396 ITGA6-206ENST00000442250 3393 ntTSL 5 BASIC8.97□□□□□ -0.972e-13■□□□□ 10.9
RPS3P23396 ADAM10-210ENST00000482945 2333 ntTSL 25.65□□□□□ -1.512e-13■□□□□ 10.9
RPS3P23396 ORMDL3-205ENST00000581284 561 ntTSL 514.99□□□□□ -0.015e-9■□□□□ 10.9
RPS3P23396 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.045e-9■□□□□ 10.9
Retrieved 100 of 24,271 protein–RNA pairs in 539.6 ms