RNA–Protein interactions for RNA: ENST00000553144.1

ATP2A2-212, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

TSL 1 (best)

Gene ATP2A2, Length 264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-212ENST00000553144 NISCHQ9Y2I1 1504 aa9.82□□□□□ -0.84
ATP2A2-212ENST00000553144 SLC24A1O60721 1099 aa9.56□□□□□ -0.88
ATP2A2-212ENST00000553144 CHIC1Q5VXU3 224 aa9.21□□□□□ -0.94
ATP2A2-212ENST00000553144 ABCC9O60706 1549 aa9.14□□□□□ -0.95
ATP2A2-212ENST00000553144 DNAJC5BQ9UF47 199 aa8.9□□□□□ -0.98
ATP2A2-212ENST00000553144 EHMT2Q96KQ7 1210 aa8.83□□□□□ -1
ATP2A2-212ENST00000553144 CCDC180Q9P1Z9 1646 aa8.78□□□□□ -1
ATP2A2-212ENST00000553144 DAXXQ9UER7 740 aaPredicted RBP8.68□□□□□ -1.02
ATP2A2-212ENST00000553144 PLPPR3Q6T4P5 718 aa8.57□□□□□ -1.04
ATP2A2-212ENST00000553144 NCBP3Q53F19 620 aaKnown RBP8.56□□□□□ -1.04
ATP2A2-212ENST00000553144 RTN4Q9NQC3 1192 aaKnown RBP8.56□□□□□ -1.04
ATP2A2-212ENST00000553144 PABPN1Q86U42 306 aaKnown RBP eCLIP8.55□□□□□ -1.04
ATP2A2-212ENST00000553144 RB1CC1Q8TDY2 1594 aa8.5□□□□□ -1.05
ATP2A2-212ENST00000553144 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
ATP2A2-212ENST00000553144 AEBP2Q6ZN18 517 aaPredicted RBP8.47□□□□□ -1.05
ATP2A2-212ENST00000553144 DCAF8L2P0C7V8 631 aa8.46□□□□□ -1.06
ATP2A2-212ENST00000553144 NACADO15069 1562 aa8.4□□□□□ -1.06
ATP2A2-212ENST00000553144 BICRAQ9NZM4 1560 aa8.35□□□□□ -1.07
ATP2A2-212ENST00000553144 TTBK1Q5TCY1 1321 aaPredicted RBP8.32□□□□□ -1.08
ATP2A2-212ENST00000553144 UNC13AQ9UPW8 1703 aa8.31□□□□□ -1.08
ATP2A2-212ENST00000553144 KCNA4P22459 653 aa8.3□□□□□ -1.08
ATP2A2-212ENST00000553144 CSRNP3Q8WYN3 585 aa8.27□□□□□ -1.09
ATP2A2-212ENST00000553144 PHF23Q9BUL5 403 aaPredicted RBP8.25□□□□□ -1.09
ATP2A2-212ENST00000553144 MYT1Q01538 1121 aa8.24□□□□□ -1.09
ATP2A2-212ENST00000553144 ARXQ96QS3 562 aa8.23□□□□□ -1.09
ATP2A2-212ENST00000553144 DNAJC5Q9H3Z4 198 aa8.23□□□□□ -1.09
ATP2A2-212ENST00000553144 CECR2Q9BXF3 1484 aa8.23□□□□□ -1.09
ATP2A2-212ENST00000553144 MYO15BQ96JP2 1530 aa8.22□□□□□ -1.09
ATP2A2-212ENST00000553144 CC2D2AQ9P2K1 1620 aa8.2□□□□□ -1.1
ATP2A2-212ENST00000553144 APLP2Q06481 763 aa8.19□□□□□ -1.1
ATP2A2-212ENST00000553144 PELP1Q8IZL8 1130 aaKnown RBP8.19□□□□□ -1.1
ATP2A2-212ENST00000553144 PRKCSHP14314 528 aaPredicted RBP8.16□□□□□ -1.1
ATP2A2-212ENST00000553144 EIF4G1Q04637 1599 aaKnown RBP8.12□□□□□ -1.11
ATP2A2-212ENST00000553144 SHROOM4Q9ULL8 1493 aa8.09□□□□□ -1.11
ATP2A2-212ENST00000553144 ERICH6Q7L0X2 663 aa8.09□□□□□ -1.11
ATP2A2-212ENST00000553144 SCRIBQ14160 1630 aa8.07□□□□□ -1.12
ATP2A2-212ENST00000553144 ZCCHC6Q5VYS8 1495 aaKnown RBP8.07□□□□□ -1.12
ATP2A2-212ENST00000553144 DCAF1Q9Y4B6 1507 aa8.04□□□□□ -1.12
ATP2A2-212ENST00000553144 TIMELESSQ9UNS1 1208 aa8.04□□□□□ -1.12
ATP2A2-212ENST00000553144 TAOK2Q9UL54 1235 aa7.99□□□□□ -1.13
ATP2A2-212ENST00000553144 RANGAP1P46060 587 aaPredicted RBP7.97□□□□□ -1.13
ATP2A2-212ENST00000553144 HOMEZQ8IX15 550 aa7.94□□□□□ -1.14
ATP2A2-212ENST00000553144 BCANQ96GW7 911 aa7.93□□□□□ -1.14
ATP2A2-212ENST00000553144 TULP1O00294 542 aaPredicted RBP7.91□□□□□ -1.14
ATP2A2-212ENST00000553144 CUX2O14529 1486 aa7.88□□□□□ -1.15
ATP2A2-212ENST00000553144 SLC4A1APQ9BWU0 796 aaKnown RBP7.88□□□□□ -1.15
ATP2A2-212ENST00000553144 ERCC6Q03468 1493 aa7.83□□□□□ -1.16
ATP2A2-212ENST00000553144 NCAPD3P42695 1498 aa7.82□□□□□ -1.16
ATP2A2-212ENST00000553144 TPRNQ4KMQ1 711 aa7.82□□□□□ -1.16
ATP2A2-212ENST00000553144 NESP48681 1621 aa7.81□□□□□ -1.16
ATP2A2-212ENST00000553144 TRIM41Q8WV44 630 aa7.78□□□□□ -1.16
ATP2A2-212ENST00000553144 ATAD2BQ9ULI0 1458 aa7.78□□□□□ -1.16
ATP2A2-212ENST00000553144 PLCB2Q00722 1185 aa7.77□□□□□ -1.17
ATP2A2-212ENST00000553144 GTF3C3Q9Y5Q9 886 aa7.73□□□□□ -1.17
ATP2A2-212ENST00000553144 PODXL2Q9NZ53 605 aa7.7□□□□□ -1.18
ATP2A2-212ENST00000553144 THOC2Q8NI27 1593 aaKnown RBP7.69□□□□□ -1.18
ATP2A2-212ENST00000553144 KLHL34Q8N239 644 aa7.69□□□□□ -1.18
ATP2A2-212ENST00000553144 HMGXB3Q12766 1538 aa7.68□□□□□ -1.18
ATP2A2-212ENST00000553144 SMARCA2P51531 1590 aa7.67□□□□□ -1.18
ATP2A2-212ENST00000553144 SMARCA4P51532 1647 aa7.67□□□□□ -1.18
ATP2A2-212ENST00000553144 HAP1P54257 671 aaPredicted RBP7.65□□□□□ -1.18
ATP2A2-212ENST00000553144 BAZ1BQ9UIG0 1483 aaKnown RBP7.64□□□□□ -1.19
ATP2A2-212ENST00000553144 EIF5BO60841 1220 aaKnown RBP7.64□□□□□ -1.19
ATP2A2-212ENST00000553144 LAMC3Q9Y6N6 1575 aa7.61□□□□□ -1.19
ATP2A2-212ENST00000553144 PDS5BQ9NTI5 1447 aa7.61□□□□□ -1.19
ATP2A2-212ENST00000553144 MROH2BQ7Z745 1585 aa7.6□□□□□ -1.19
ATP2A2-212ENST00000553144 KIF21AQ7Z4S6 1674 aa7.6□□□□□ -1.19
ATP2A2-212ENST00000553144 CADPSQ9ULU8 1353 aa7.59□□□□□ -1.19
ATP2A2-212ENST00000553144 PEG3Q9GZU2 1588 aa7.59□□□□□ -1.2
ATP2A2-212ENST00000553144 BAZ1AQ9NRL2 1556 aaPredicted RBP7.58□□□□□ -1.2
ATP2A2-212ENST00000553144 OSCARQ8IYS5 282 aa7.57□□□□□ -1.2
ATP2A2-212ENST00000553144 TMEM132AQ24JP5 1023 aa7.56□□□□□ -1.2
ATP2A2-212ENST00000553144 NPM2Q86SE8 214 aaKnown RBP7.56□□□□□ -1.2
ATP2A2-212ENST00000553144 VSIG10Q8N0Z9 540 aa7.56□□□□□ -1.2
ATP2A2-212ENST00000553144 MRC2Q9UBG0 1479 aa7.55□□□□□ -1.2
ATP2A2-212ENST00000553144 WDR62O43379 1518 aa7.53□□□□□ -1.2
ATP2A2-212ENST00000553144 ZBTB22O15209 634 aa7.53□□□□□ -1.2
ATP2A2-212ENST00000553144 FBXO3Q9UK99 471 aa7.53□□□□□ -1.2
ATP2A2-212ENST00000553144 C14orf37Q86TY3 774 aa7.49□□□□□ -1.21
ATP2A2-212ENST00000553144 FANCD2Q9BXW9 1451 aa7.48□□□□□ -1.21
ATP2A2-212ENST00000553144 CEP164Q9UPV0 1460 aa7.47□□□□□ -1.21
ATP2A2-212ENST00000553144 WIZO95785 1651 aa7.46□□□□□ -1.22
ATP2A2-212ENST00000553144 URB2Q14146 1524 aaKnown RBP7.46□□□□□ -1.22
ATP2A2-212ENST00000553144 CFTRP13569 1480 aa7.44□□□□□ -1.22
ATP2A2-212ENST00000553144 RIMBP3CA6NJZ7 1639 aa7.44□□□□□ -1.22
ATP2A2-212ENST00000553144 RIMBP3BA6NNM3 1639 aa7.44□□□□□ -1.22
ATP2A2-212ENST00000553144 RIMBP3Q9UFD9 1639 aa7.44□□□□□ -1.22
ATP2A2-212ENST00000553144 CYB5RLQ6IPT4 315 aa7.43□□□□□ -1.22
ATP2A2-212ENST00000553144 ZNF608Q9ULD9 1512 aaPredicted RBP7.42□□□□□ -1.22
ATP2A2-212ENST00000553144 ADRA2BP18089 450 aa7.42□□□□□ -1.22
ATP2A2-212ENST00000553144 ARHGEF11O15085 1522 aa7.41□□□□□ -1.22
ATP2A2-212ENST00000553144 FKBP8Q14318 412 aa7.39□□□□□ -1.23
ATP2A2-212ENST00000553144 TRHP20396 242 aaPredicted RBP7.38□□□□□ -1.23
ATP2A2-212ENST00000553144 KDM2AQ9Y2K7 1162 aa7.38□□□□□ -1.23
ATP2A2-212ENST00000553144 RSF1Q96T23 1441 aaPredicted RBP7.37□□□□□ -1.23
ATP2A2-212ENST00000553144 TRIM26Q12899 539 aaPredicted RBP7.37□□□□□ -1.23
ATP2A2-212ENST00000553144 AQRO60306 1485 aaKnown RBP eCLIP7.34□□□□□ -1.23
ATP2A2-212ENST00000553144 ARAP1Q96P48 1450 aa7.34□□□□□ -1.23
ATP2A2-212ENST00000553144 IFT140Q96RY7 1462 aa7.34□□□□□ -1.23
ATP2A2-212ENST00000553144 FBLN2P98095 1184 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms