RNA–Protein interactions for RNA: ENST00000473118.5

TARDBP-205, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-205ENST00000473118 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
TARDBP-205ENST00000473118 CHIC1Q5VXU3 224 aa26.28■■□□□ 1.8
TARDBP-205ENST00000473118 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
TARDBP-205ENST00000473118 SENP3Q9H4L4 574 aaPredicted RBP22.97■■□□□ 1.27
TARDBP-205ENST00000473118 PLPPR3Q6T4P5 718 aa21.35■■□□□ 1.01
TARDBP-205ENST00000473118 FOXD1Q16676 465 aa21.3■■□□□ 1
TARDBP-205ENST00000473118 ADRA2BP18089 450 aa20.43■□□□□ 0.86
TARDBP-205ENST00000473118 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
TARDBP-205ENST00000473118 PIAS4Q8N2W9 510 aaPredicted RBP20.13■□□□□ 0.81
TARDBP-205ENST00000473118 MSH5O43196 834 aa19.72■□□□□ 0.75
TARDBP-205ENST00000473118 PPP4R3CPQ6ZMV5 832 aa18.8■□□□□ 0.6
TARDBP-205ENST00000473118 SCAF1Q9H7N4 1312 aaKnown RBP18.76■□□□□ 0.59
TARDBP-205ENST00000473118 NISCHQ9Y2I1 1504 aa18.7■□□□□ 0.58
TARDBP-205ENST00000473118 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
TARDBP-205ENST00000473118 NCBP3Q53F19 620 aaKnown RBP18.34■□□□□ 0.53
TARDBP-205ENST00000473118 CNKSR2Q8WXI2 1034 aa18.29■□□□□ 0.52
TARDBP-205ENST00000473118 DMRT2Q9Y5R5 561 aa18.29■□□□□ 0.52
TARDBP-205ENST00000473118 KCNA4P22459 653 aa18.24■□□□□ 0.51
TARDBP-205ENST00000473118 POTEDQ86YR6 584 aa18.09■□□□□ 0.49
TARDBP-205ENST00000473118 NPM3O75607 178 aaKnown RBP17.99■□□□□ 0.47
TARDBP-205ENST00000473118 RNF216Q9NWF9 866 aaPredicted RBP17.93■□□□□ 0.46
TARDBP-205ENST00000473118 HOXD11P31277 338 aaPredicted RBP17.84■□□□□ 0.45
TARDBP-205ENST00000473118 DCAF8L1A6NGE4 600 aa17.68■□□□□ 0.42
TARDBP-205ENST00000473118 SLC4A1APQ9BWU0 796 aaKnown RBP17.41■□□□□ 0.38
TARDBP-205ENST00000473118 DNAJC5BQ9UF47 199 aa17.33■□□□□ 0.36
TARDBP-205ENST00000473118 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.342e-9■■□□□ 13.8
TARDBP-205ENST00000473118 SLC4A2P04920 1241 aa16.97■□□□□ 0.31
TARDBP-205ENST00000473118 EHMT2Q96KQ7 1210 aa16.85■□□□□ 0.29
TARDBP-205ENST00000473118 RNF39Q9H2S5 420 aa16.83■□□□□ 0.28
TARDBP-205ENST00000473118 FOXD4L1Q9NU39 408 aa16.83■□□□□ 0.28
TARDBP-205ENST00000473118 U3KPZ7 1027 aaPredicted RBP16.75■□□□□ 0.27
TARDBP-205ENST00000473118 ZBTB22O15209 634 aa16.73■□□□□ 0.27
TARDBP-205ENST00000473118 C1QBPQ07021 282 aaKnown RBP16.66■□□□□ 0.26
TARDBP-205ENST00000473118 MYCNP04198 464 aaPredicted RBP16.65■□□□□ 0.26
TARDBP-205ENST00000473118 CCDC180Q9P1Z9 1646 aa16.62■□□□□ 0.25
TARDBP-205ENST00000473118 CACNB1Q02641 598 aaPredicted RBP16.59■□□□□ 0.25
TARDBP-205ENST00000473118 CSRNP3Q8WYN3 585 aa16.59■□□□□ 0.25
TARDBP-205ENST00000473118 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.58■□□□□ 0.24
TARDBP-205ENST00000473118 HNRNPUL2Q1KMD3 747 aaKnown RBP16.58■□□□□ 0.24
TARDBP-205ENST00000473118 SAMD1Q6SPF0 538 aaPredicted RBP16.51■□□□□ 0.23
TARDBP-205ENST00000473118 APLP2Q06481 763 aa16.47■□□□□ 0.23
TARDBP-205ENST00000473118 CAPN15O75808 1086 aa16.37■□□□□ 0.21
TARDBP-205ENST00000473118 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
TARDBP-205ENST00000473118 TRHP20396 242 aaPredicted RBP16.28■□□□□ 0.2
TARDBP-205ENST00000473118 ATXN8OSP0DMR3 200 aa16.22■□□□□ 0.19
TARDBP-205ENST00000473118 ZNF219Q9P2Y4 722 aaPredicted RBP16.21■□□□□ 0.19
TARDBP-205ENST00000473118 ATF5Q9Y2D1 282 aaPredicted RBP16.18■□□□□ 0.18
TARDBP-205ENST00000473118 ABCB7O75027 752 aa16.04■□□□□ 0.16
TARDBP-205ENST00000473118 DSG3P32926 999 aa16■□□□□ 0.15
TARDBP-205ENST00000473118 POLA2Q14181 598 aa15.94■□□□□ 0.14
TARDBP-205ENST00000473118 ABCC9O60706 1549 aa15.81■□□□□ 0.12
TARDBP-205ENST00000473118 ZBTB12Q9Y330 459 aaPredicted RBP15.67■□□□□ 0.1
TARDBP-205ENST00000473118 ZCCHC6Q5VYS8 1495 aaKnown RBP15.65■□□□□ 0.1
TARDBP-205ENST00000473118 FBLN2P98095 1184 aa15.62■□□□□ 0.09
TARDBP-205ENST00000473118 DCAF1Q9Y4B6 1507 aa15.56■□□□□ 0.08
TARDBP-205ENST00000473118 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
TARDBP-205ENST00000473118 NACADO15069 1562 aa15.49■□□□□ 0.07
TARDBP-205ENST00000473118 MKRN4PQ13434 485 aaPredicted RBP15.44■□□□□ 0.06
TARDBP-205ENST00000473118 RB1CC1Q8TDY2 1594 aa15.41■□□□□ 0.06
TARDBP-205ENST00000473118 OSCARQ8IYS5 282 aa15.39■□□□□ 0.05
TARDBP-205ENST00000473118 RBM42Q9BTD8 480 aaKnown RBP15.32■□□□□ 0.04
TARDBP-205ENST00000473118 UNC13AQ9UPW8 1703 aa15.24■□□□□ 0.03
TARDBP-205ENST00000473118 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
TARDBP-205ENST00000473118 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
TARDBP-205ENST00000473118 SPDYE2Q495Y8 402 aa15.21■□□□□ 0.03
TARDBP-205ENST00000473118 DCAF8L2P0C7V8 631 aa15.2■□□□□ 0.02
TARDBP-205ENST00000473118 ZNF692Q9BU19 519 aaPredicted RBP15.2■□□□□ 0.02
TARDBP-205ENST00000473118 SPDYE4A6NLX3 237 aa15.15■□□□□ 0.02
TARDBP-205ENST00000473118 FKBP8Q14318 412 aa15.1■□□□□ 0.01
TARDBP-205ENST00000473118 AKT1S1Q96B36 256 aa15.08■□□□□ 0
TARDBP-205ENST00000473118 SCRIBQ14160 1630 aa15.05■□□□□ -0
TARDBP-205ENST00000473118 BICRAQ9NZM4 1560 aa15.02■□□□□ -0
TARDBP-205ENST00000473118 SSUH2Q9Y2M2 353 aa15.02■□□□□ -0
TARDBP-205ENST00000473118 PABPN1Q86U42 306 aaKnown RBP eCLIP14.97□□□□□ -0.01
TARDBP-205ENST00000473118 REM2Q8IYK8 340 aaPredicted RBP14.94□□□□□ -0.02
TARDBP-205ENST00000473118 SHROOM4Q9ULL8 1493 aa14.87□□□□□ -0.03
TARDBP-205ENST00000473118 CLEC11AQ9Y240 323 aa14.83□□□□□ -0.04
TARDBP-205ENST00000473118 SPDYE1Q8NFV5 336 aaPredicted RBP14.82□□□□□ -0.04
TARDBP-205ENST00000473118 PITPNM1O00562 1244 aa14.76□□□□□ -0.05
TARDBP-205ENST00000473118 PROM2Q8N271 834 aa14.73□□□□□ -0.05
TARDBP-205ENST00000473118 STAG3Q9UJ98 1225 aa14.71□□□□□ -0.05
TARDBP-205ENST00000473118 CHRDL2Q6WN34 429 aa14.69□□□□□ -0.06
TARDBP-205ENST00000473118 PRR29P0C7W0 189 aa14.65□□□□□ -0.06
TARDBP-205ENST00000473118 FBXO3Q9UK99 471 aa14.59□□□□□ -0.07
TARDBP-205ENST00000473118 EIF4G1Q04637 1599 aaKnown RBP14.54□□□□□ -0.08
TARDBP-205ENST00000473118 CECR2Q9BXF3 1484 aa14.5□□□□□ -0.09
TARDBP-205ENST00000473118 SMARCA4P51532 1647 aa14.48□□□□□ -0.09
TARDBP-205ENST00000473118 BAZ1AQ9NRL2 1556 aaPredicted RBP14.47□□□□□ -0.09
TARDBP-205ENST00000473118 FXR2P51116 673 aaKnown RBP eCLIP14.47□□□□□ -0.092e-7■■□□□ 11.5
TARDBP-205ENST00000473118 PIP4P2Q8N4L2 257 aa14.47□□□□□ -0.09
TARDBP-205ENST00000473118 PRKAR2AP13861 404 aaKnown RBP14.43□□□□□ -0.1
TARDBP-205ENST00000473118 MIER1Q8N108 512 aa14.43□□□□□ -0.1
TARDBP-205ENST00000473118 PLEKHG5O94827 1062 aa14.42□□□□□ -0.1
TARDBP-205ENST00000473118 CHADLQ6NUI6 762 aa14.42□□□□□ -0.1
TARDBP-205ENST00000473118 PLCD3Q8N3E9 789 aa14.42□□□□□ -0.1
TARDBP-205ENST00000473118 CC2D2AQ9P2K1 1620 aa14.41□□□□□ -0.1
TARDBP-205ENST00000473118 MROH2BQ7Z745 1585 aa14.41□□□□□ -0.1
TARDBP-205ENST00000473118 PEG3Q9GZU2 1588 aa14.4□□□□□ -0.1
TARDBP-205ENST00000473118 CREBZFQ9NS37 354 aa14.35□□□□□ -0.11
TARDBP-205ENST00000473118 VASPP50552 380 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms