RNA–Protein interactions for RNA: ENST00000373055.5

CDCA8-202, Transcript of cell division cycle associated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA8, Length 2,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8-202ENST00000373055 NISCHQ9Y2I1 1504 aa21.4■■□□□ 1.02
CDCA8-202ENST00000373055 CCDC180Q9P1Z9 1646 aa18.6■□□□□ 0.57
CDCA8-202ENST00000373055 ZCCHC6Q5VYS8 1495 aaKnown RBP17.96■□□□□ 0.47
CDCA8-202ENST00000373055 DCAF8L2P0C7V8 631 aa17.78■□□□□ 0.44
CDCA8-202ENST00000373055 ABCC9O60706 1549 aa17.71■□□□□ 0.43
CDCA8-202ENST00000373055 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
CDCA8-202ENST00000373055 SHROOM4Q9ULL8 1493 aa17.57■□□□□ 0.4
CDCA8-202ENST00000373055 MYO15BQ96JP2 1530 aa17.39■□□□□ 0.37
CDCA8-202ENST00000373055 NACADO15069 1562 aa17.33■□□□□ 0.36
CDCA8-202ENST00000373055 SCRIBQ14160 1630 aa17.21■□□□□ 0.35
CDCA8-202ENST00000373055 RB1CC1Q8TDY2 1594 aa17.19■□□□□ 0.34
CDCA8-202ENST00000373055 UNC13AQ9UPW8 1703 aa16.94■□□□□ 0.3
CDCA8-202ENST00000373055 SUPT5HO00267 1087 aaKnown RBP16.89■□□□□ 0.29
CDCA8-202ENST00000373055 BICRAQ9NZM4 1560 aa16.75■□□□□ 0.27
CDCA8-202ENST00000373055 PABPN1Q86U42 306 aaKnown RBP eCLIP16.74■□□□□ 0.27
CDCA8-202ENST00000373055 CECR2Q9BXF3 1484 aa16.7■□□□□ 0.26
CDCA8-202ENST00000373055 HRCP23327 699 aa16.63■□□□□ 0.25
CDCA8-202ENST00000373055 RSF1Q96T23 1441 aaPredicted RBP16.63■□□□□ 0.25
CDCA8-202ENST00000373055 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.24
CDCA8-202ENST00000373055 BAZ1AQ9NRL2 1556 aaPredicted RBP16.49■□□□□ 0.23
CDCA8-202ENST00000373055 WIZO95785 1651 aa16.46■□□□□ 0.23
CDCA8-202ENST00000373055 SMARCA4P51532 1647 aa16.45■□□□□ 0.22
CDCA8-202ENST00000373055 PELP1Q8IZL8 1130 aaKnown RBP16.43■□□□□ 0.22
CDCA8-202ENST00000373055 EIF4G1Q04637 1599 aaKnown RBP16.22■□□□□ 0.19
CDCA8-202ENST00000373055 PEG3Q9GZU2 1588 aa16.21■□□□□ 0.19
CDCA8-202ENST00000373055 TOP2AP11388 1531 aaKnown RBP16.21■□□□□ 0.19
CDCA8-202ENST00000373055 ATAD2BQ9ULI0 1458 aa16.19■□□□□ 0.18
CDCA8-202ENST00000373055 CHIC1Q5VXU3 224 aa16.14■□□□□ 0.17
CDCA8-202ENST00000373055 SMARCA2P51531 1590 aa16.13■□□□□ 0.17
CDCA8-202ENST00000373055 CCDC88BA6NC98 1476 aa16.1■□□□□ 0.17
CDCA8-202ENST00000373055 PPARGC1BQ86YN6 1023 aaKnown RBP16.08■□□□□ 0.17
CDCA8-202ENST00000373055 BAZ1BQ9UIG0 1483 aaKnown RBP16.08■□□□□ 0.16
CDCA8-202ENST00000373055 PCGF6Q9BYE7 350 aa16.04■□□□□ 0.16
CDCA8-202ENST00000373055 NCAPD3P42695 1498 aa16.02■□□□□ 0.16
CDCA8-202ENST00000373055 CC2D2AQ9P2K1 1620 aa16■□□□□ 0.15
CDCA8-202ENST00000373055 HMGXB3Q12766 1538 aa15.97■□□□□ 0.15
CDCA8-202ENST00000373055 MYT1Q01538 1121 aa15.9■□□□□ 0.14
CDCA8-202ENST00000373055 TRIM41Q8WV44 630 aa15.83■□□□□ 0.12
CDCA8-202ENST00000373055 ABCC8Q09428 1581 aa15.8■□□□□ 0.12
CDCA8-202ENST00000373055 SCAF1Q9H7N4 1312 aaKnown RBP15.76■□□□□ 0.11
CDCA8-202ENST00000373055 DNAJC5BQ9UF47 199 aa15.74■□□□□ 0.11
CDCA8-202ENST00000373055 CFTRP13569 1480 aa15.67■□□□□ 0.1
CDCA8-202ENST00000373055 ZEB1P37275 1124 aaPredicted RBP15.64■□□□□ 0.09
CDCA8-202ENST00000373055 CADPSQ9ULU8 1353 aa15.63■□□□□ 0.09
CDCA8-202ENST00000373055 WRNQ14191 1432 aaPredicted RBP eCLIP15.63■□□□□ 0.09
CDCA8-202ENST00000373055 TRIM26Q12899 539 aaPredicted RBP15.62■□□□□ 0.09
CDCA8-202ENST00000373055 FAM9AQ8IZU1 332 aaPredicted RBP15.61■□□□□ 0.09
CDCA8-202ENST00000373055 SYNJ1O43426 1573 aa15.6■□□□□ 0.09
CDCA8-202ENST00000373055 LOC105371045A0A1W2PR82 267 aa15.59■□□□□ 0.09
CDCA8-202ENST00000373055 NESP48681 1621 aa15.57■□□□□ 0.08
CDCA8-202ENST00000373055 PRDM2Q13029 1718 aa15.57■□□□□ 0.08
CDCA8-202ENST00000373055 SOGA1O94964 1423 aa15.5■□□□□ 0.07
CDCA8-202ENST00000373055 TOP2BQ02880 1626 aa15.49■□□□□ 0.07
CDCA8-202ENST00000373055 CUX1P39880 1505 aa15.49■□□□□ 0.07
CDCA8-202ENST00000373055 RUSC2Q8N2Y8 1516 aa15.47■□□□□ 0.07
CDCA8-202ENST00000373055 BIVM-ERCC5R4GMW8 1640 aa15.47■□□□□ 0.07
CDCA8-202ENST00000373055 FANCD2Q9BXW9 1451 aa15.46■□□□□ 0.07
CDCA8-202ENST00000373055 LAMC3Q9Y6N6 1575 aa15.46■□□□□ 0.07
CDCA8-202ENST00000373055 EHMT2Q96KQ7 1210 aa15.45■□□□□ 0.06
CDCA8-202ENST00000373055 ACIN1Q9UKV3 1341 aaKnown RBP15.37■□□□□ 0.05
CDCA8-202ENST00000373055 KIF21AQ7Z4S6 1674 aa15.35■□□□□ 0.05
CDCA8-202ENST00000373055 CEP164Q9UPV0 1460 aa15.35■□□□□ 0.05
CDCA8-202ENST00000373055 PDS5BQ9NTI5 1447 aa15.34■□□□□ 0.05
CDCA8-202ENST00000373055 CSRNP3Q8WYN3 585 aa15.34■□□□□ 0.05
CDCA8-202ENST00000373055 EEA1Q15075 1411 aa15.33■□□□□ 0.04
CDCA8-202ENST00000373055 FGD5Q6ZNL6 1462 aa15.31■□□□□ 0.04
CDCA8-202ENST00000373055 TOPBP1Q92547 1522 aa15.3■□□□□ 0.04
CDCA8-202ENST00000373055 URB2Q14146 1524 aaKnown RBP15.3■□□□□ 0.04
CDCA8-202ENST00000373055 DNMBPQ6XZF7 1577 aa15.3■□□□□ 0.04
CDCA8-202ENST00000373055 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
CDCA8-202ENST00000373055 POLA1P09884 1462 aaPredicted RBP15.23■□□□□ 0.03
CDCA8-202ENST00000373055 RAD54L2Q9Y4B4 1467 aa15.23■□□□□ 0.03
CDCA8-202ENST00000373055 CUX2O14529 1486 aa15.21■□□□□ 0.02
CDCA8-202ENST00000373055 KIF27Q86VH2 1401 aa15.21■□□□□ 0.02
CDCA8-202ENST00000373055 KIF21BO75037 1637 aa15.17■□□□□ 0.02
CDCA8-202ENST00000373055 GTF3C3Q9Y5Q9 886 aa15.17■□□□□ 0.02
CDCA8-202ENST00000373055 GOLGA3Q08378 1498 aa15.16■□□□□ 0.02
CDCA8-202ENST00000373055 MRC2Q9UBG0 1479 aa15.16■□□□□ 0.02
CDCA8-202ENST00000373055 RAPGEF2Q9Y4G8 1499 aa15.16■□□□□ 0.02
CDCA8-202ENST00000373055 UBTFP17480 764 aaKnown RBP15.16■□□□□ 0.02
CDCA8-202ENST00000373055 CENPBP07199 599 aaPredicted RBP15.15■□□□□ 0.02
CDCA8-202ENST00000373055 ABCA10Q8WWZ4 1543 aa15.14■□□□□ 0.01
CDCA8-202ENST00000373055 TNIKQ9UKE5 1360 aa15.13■□□□□ 0.01
CDCA8-202ENST00000373055 ERCC6Q03468 1493 aa15.13■□□□□ 0.01
CDCA8-202ENST00000373055 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
CDCA8-202ENST00000373055 IGF1RP08069 1367 aa15.12■□□□□ 0.01
CDCA8-202ENST00000373055 WDR97A6NE52 1622 aa15.1■□□□□ 0.01
CDCA8-202ENST00000373055 WDR62O43379 1518 aa15.08■□□□□ 0.01
CDCA8-202ENST00000373055 TARBP1Q13395 1621 aaKnown RBP15.08■□□□□ 0
CDCA8-202ENST00000373055 TDRD9Q8NDG6 1382 aaKnown RBP15.08■□□□□ 0
CDCA8-202ENST00000373055 CEP162Q5TB80 1403 aa15.07■□□□□ 0
CDCA8-202ENST00000373055 THOC2Q8NI27 1593 aaKnown RBP15.06■□□□□ 0
CDCA8-202ENST00000373055 ERICH3Q5RHP9 1530 aa15.06■□□□□ 0
CDCA8-202ENST00000373055 ABCA5Q8WWZ7 1642 aa15.03■□□□□ -0
CDCA8-202ENST00000373055 CARMIL1Q5VZK9 1371 aa15.03■□□□□ -0
CDCA8-202ENST00000373055 TTBK1Q5TCY1 1321 aaPredicted RBP15.02■□□□□ -0
CDCA8-202ENST00000373055 GAPVD1Q14C86 1478 aa15□□□□□ -0.01
CDCA8-202ENST00000373055 RANGAP1P46060 587 aaPredicted RBP15□□□□□ -0.01
CDCA8-202ENST00000373055 AQRO60306 1485 aaKnown RBP eCLIP14.98□□□□□ -0.015e-8■■■■■ 30.4
CDCA8-202ENST00000373055 ZNF608Q9ULD9 1512 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms