RNA–Protein interactions for RNA: ENST00000400370.8

ATP7B-204, Transcript of ATPase copper transporting beta, humanhuman

TSL 1 (best) BASIC

Gene ATP7B, Length 3,252 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-204ENST00000400370 NISCHQ9Y2I1 1504 aa22.72■■□□□ 1.23
ATP7B-204ENST00000400370 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.85
ATP7B-204ENST00000400370 MYO15BQ96JP2 1530 aa19.09■□□□□ 0.65
ATP7B-204ENST00000400370 DCAF1Q9Y4B6 1507 aa19.07■□□□□ 0.64
ATP7B-204ENST00000400370 ABCC9O60706 1549 aa19.06■□□□□ 0.64
ATP7B-204ENST00000400370 ZCCHC6Q5VYS8 1495 aaKnown RBP19.02■□□□□ 0.64
ATP7B-204ENST00000400370 NACADO15069 1562 aa18.93■□□□□ 0.62
ATP7B-204ENST00000400370 RB1CC1Q8TDY2 1594 aa18.82■□□□□ 0.6
ATP7B-204ENST00000400370 SHROOM4Q9ULL8 1493 aa18.63■□□□□ 0.57
ATP7B-204ENST00000400370 UNC13AQ9UPW8 1703 aa18.41■□□□□ 0.54
ATP7B-204ENST00000400370 DCAF8L2P0C7V8 631 aa18.26■□□□□ 0.51
ATP7B-204ENST00000400370 BICRAQ9NZM4 1560 aa18.17■□□□□ 0.5
ATP7B-204ENST00000400370 SCRIBQ14160 1630 aa18.17■□□□□ 0.5
ATP7B-204ENST00000400370 SUPT5HO00267 1087 aaKnown RBP18.14■□□□□ 0.49
ATP7B-204ENST00000400370 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
ATP7B-204ENST00000400370 EIF4G1Q04637 1599 aaKnown RBP17.64■□□□□ 0.41
ATP7B-204ENST00000400370 BAZ1AQ9NRL2 1556 aaPredicted RBP17.64■□□□□ 0.41
ATP7B-204ENST00000400370 SMARCA4P51532 1647 aa17.59■□□□□ 0.41
ATP7B-204ENST00000400370 PEG3Q9GZU2 1588 aa17.59■□□□□ 0.41
ATP7B-204ENST00000400370 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
ATP7B-204ENST00000400370 CC2D2AQ9P2K1 1620 aa17.47■□□□□ 0.39
ATP7B-204ENST00000400370 SMARCA2P51531 1590 aa17.47■□□□□ 0.39
ATP7B-204ENST00000400370 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
ATP7B-204ENST00000400370 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
ATP7B-204ENST00000400370 MROH2BQ7Z745 1585 aa17.39■□□□□ 0.37
ATP7B-204ENST00000400370 NCAPD3P42695 1498 aa17.38■□□□□ 0.37
ATP7B-204ENST00000400370 ATAD2BQ9ULI0 1458 aa17.34■□□□□ 0.37
ATP7B-204ENST00000400370 RSF1Q96T23 1441 aaPredicted RBP17.31■□□□□ 0.36
ATP7B-204ENST00000400370 WIZO95785 1651 aa17.24■□□□□ 0.35
ATP7B-204ENST00000400370 TOP2AP11388 1531 aaKnown RBP17.21■□□□□ 0.35
ATP7B-204ENST00000400370 BAZ1BQ9UIG0 1483 aaKnown RBP17.19■□□□□ 0.34
ATP7B-204ENST00000400370 LOC105371045A0A1W2PR82 267 aa17.15■□□□□ 0.34
ATP7B-204ENST00000400370 DNAJC5BQ9UF47 199 aa17.11■□□□□ 0.33
ATP7B-204ENST00000400370 PRDM2Q13029 1718 aa16.97■□□□□ 0.31
ATP7B-204ENST00000400370 LAMC3Q9Y6N6 1575 aa16.94■□□□□ 0.3
ATP7B-204ENST00000400370 PCGF6Q9BYE7 350 aa16.94■□□□□ 0.3
ATP7B-204ENST00000400370 CCDC88BA6NC98 1476 aa16.86■□□□□ 0.29
ATP7B-204ENST00000400370 EHMT2Q96KQ7 1210 aa16.83■□□□□ 0.28
ATP7B-204ENST00000400370 CFTRP13569 1480 aa16.82■□□□□ 0.28
ATP7B-204ENST00000400370 FAM9AQ8IZU1 332 aaPredicted RBP16.81■□□□□ 0.28
ATP7B-204ENST00000400370 TRIM41Q8WV44 630 aa16.79■□□□□ 0.28
ATP7B-204ENST00000400370 CADPSQ9ULU8 1353 aa16.78■□□□□ 0.28
ATP7B-204ENST00000400370 HRCP23327 699 aa16.77■□□□□ 0.28
ATP7B-204ENST00000400370 PPARGC1BQ86YN6 1023 aaKnown RBP16.69■□□□□ 0.26
ATP7B-204ENST00000400370 PDS5BQ9NTI5 1447 aa16.69■□□□□ 0.26
ATP7B-204ENST00000400370 KIF21AQ7Z4S6 1674 aa16.62■□□□□ 0.25
ATP7B-204ENST00000400370 NESP48681 1621 aa16.59■□□□□ 0.25
ATP7B-204ENST00000400370 ABCC8Q09428 1581 aa16.58■□□□□ 0.24
ATP7B-204ENST00000400370 FANCD2Q9BXW9 1451 aa16.56■□□□□ 0.24
ATP7B-204ENST00000400370 THOC2Q8NI27 1593 aaKnown RBP16.56■□□□□ 0.24
ATP7B-204ENST00000400370 CEP164Q9UPV0 1460 aa16.55■□□□□ 0.24
ATP7B-204ENST00000400370 WDR62O43379 1518 aa16.53■□□□□ 0.24
ATP7B-204ENST00000400370 MRC2Q9UBG0 1479 aa16.51■□□□□ 0.23
ATP7B-204ENST00000400370 TRIM26Q12899 539 aaPredicted RBP16.48■□□□□ 0.23
ATP7B-204ENST00000400370 DNMBPQ6XZF7 1577 aa16.47■□□□□ 0.23
ATP7B-204ENST00000400370 ERCC6Q03468 1493 aa16.47■□□□□ 0.23
ATP7B-204ENST00000400370 BIVM-ERCC5R4GMW8 1640 aa16.46■□□□□ 0.23
ATP7B-204ENST00000400370 CUX2O14529 1486 aa16.46■□□□□ 0.23
ATP7B-204ENST00000400370 WDR97A6NE52 1622 aa16.42■□□□□ 0.22
ATP7B-204ENST00000400370 TOP2BQ02880 1626 aa16.4■□□□□ 0.22
ATP7B-204ENST00000400370 URB2Q14146 1524 aaKnown RBP16.38■□□□□ 0.21
ATP7B-204ENST00000400370 TOPBP1Q92547 1522 aa16.37■□□□□ 0.21
ATP7B-204ENST00000400370 CUX1P39880 1505 aa16.33■□□□□ 0.2
ATP7B-204ENST00000400370 SOGA1O94964 1423 aa16.31■□□□□ 0.2
ATP7B-204ENST00000400370 WRNQ14191 1432 aaPredicted RBP eCLIP16.31■□□□□ 0.2
ATP7B-204ENST00000400370 RUSC2Q8N2Y8 1516 aa16.3■□□□□ 0.2
ATP7B-204ENST00000400370 SYNJ1O43426 1573 aa16.27■□□□□ 0.2
ATP7B-204ENST00000400370 TARBP1Q13395 1621 aaKnown RBP16.26■□□□□ 0.19
ATP7B-204ENST00000400370 IFT140Q96RY7 1462 aa16.26■□□□□ 0.19
ATP7B-204ENST00000400370 TTBK1Q5TCY1 1321 aaPredicted RBP16.22■□□□□ 0.19
ATP7B-204ENST00000400370 POLA1P09884 1462 aaPredicted RBP16.21■□□□□ 0.19
ATP7B-204ENST00000400370 FGD5Q6ZNL6 1462 aa16.2■□□□□ 0.18
ATP7B-204ENST00000400370 ABCA10Q8WWZ4 1543 aa16.19■□□□□ 0.18
ATP7B-204ENST00000400370 ABCA5Q8WWZ7 1642 aa16.14■□□□□ 0.17
ATP7B-204ENST00000400370 CEP162Q5TB80 1403 aa16.09■□□□□ 0.17
ATP7B-204ENST00000400370 PBRM1Q86U86 1689 aa16.08■□□□□ 0.16
ATP7B-204ENST00000400370 EIF4G3O43432 1585 aaKnown RBP16.08■□□□□ 0.16
ATP7B-204ENST00000400370 ERICH3Q5RHP9 1530 aa16.06■□□□□ 0.16
ATP7B-204ENST00000400370 CSRNP3Q8WYN3 585 aa16.05■□□□□ 0.16
ATP7B-204ENST00000400370 EEA1Q15075 1411 aa16.03■□□□□ 0.16
ATP7B-204ENST00000400370 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.03■□□□□ 0.16
ATP7B-204ENST00000400370 CUL7Q14999 1698 aa16.02■□□□□ 0.15
ATP7B-204ENST00000400370 UBTFP17480 764 aaKnown RBP16.01■□□□□ 0.15
ATP7B-204ENST00000400370 RAD54L2Q9Y4B4 1467 aa16.01■□□□□ 0.15
ATP7B-204ENST00000400370 GRIN2BQ13224 1484 aa15.99■□□□□ 0.15
ATP7B-204ENST00000400370 MAGI1Q96QZ7 1491 aaPredicted RBP15.99■□□□□ 0.15
ATP7B-204ENST00000400370 TNIKQ9UKE5 1360 aa15.99■□□□□ 0.15
ATP7B-204ENST00000400370 KIF27Q86VH2 1401 aa15.98■□□□□ 0.15
ATP7B-204ENST00000400370 GAPVD1Q14C86 1478 aa15.98■□□□□ 0.15
ATP7B-204ENST00000400370 ZNF608Q9ULD9 1512 aaPredicted RBP15.95■□□□□ 0.14
ATP7B-204ENST00000400370 ADAMTS12P58397 1594 aa15.92■□□□□ 0.14
ATP7B-204ENST00000400370 GOLGA3Q08378 1498 aa15.91■□□□□ 0.14
ATP7B-204ENST00000400370 RANGAP1P46060 587 aaPredicted RBP15.91■□□□□ 0.14
ATP7B-204ENST00000400370 ZEB1P37275 1124 aaPredicted RBP15.89■□□□□ 0.13
ATP7B-204ENST00000400370 RAPGEF2Q9Y4G8 1499 aa15.88■□□□□ 0.13
ATP7B-204ENST00000400370 AQRO60306 1485 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■■■■■ 28
ATP7B-204ENST00000400370 SYNJ2O15056 1496 aa15.86■□□□□ 0.13
ATP7B-204ENST00000400370 FHAD1B1AJZ9 1412 aa15.86■□□□□ 0.13
ATP7B-204ENST00000400370 KIF21BO75037 1637 aa15.84■□□□□ 0.13
ATP7B-204ENST00000400370 TDRD9Q8NDG6 1382 aaKnown RBP15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms