RNA–Protein interactions for RNA: ENST00000634844.1

ATP7B-215, Transcript of ATPase copper transporting beta, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ATP7B, Length 4,398 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP7B-215ENST00000634844 NISCHQ9Y2I1 1504 aa19.14■□□□□ 0.65
ATP7B-215ENST00000634844 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
ATP7B-215ENST00000634844 DCAF8L2P0C7V8 631 aa16.38■□□□□ 0.21
ATP7B-215ENST00000634844 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
ATP7B-215ENST00000634844 SUPT5HO00267 1087 aaKnown RBP16.19■□□□□ 0.18
ATP7B-215ENST00000634844 ZCCHC6Q5VYS8 1495 aaKnown RBP16.11■□□□□ 0.17
ATP7B-215ENST00000634844 DCAF1Q9Y4B6 1507 aa15.68■□□□□ 0.1
ATP7B-215ENST00000634844 CHIC1Q5VXU3 224 aa15.5■□□□□ 0.07
ATP7B-215ENST00000634844 ABCC9O60706 1549 aa15.35■□□□□ 0.05
ATP7B-215ENST00000634844 SCRIBQ14160 1630 aa15.3■□□□□ 0.04
ATP7B-215ENST00000634844 MYO15BQ96JP2 1530 aa15.28■□□□□ 0.04
ATP7B-215ENST00000634844 NACADO15069 1562 aa15.2■□□□□ 0.02
ATP7B-215ENST00000634844 TRIM41Q8WV44 630 aa15.14■□□□□ 0.01
ATP7B-215ENST00000634844 RSF1Q96T23 1441 aaPredicted RBP15.11■□□□□ 0.01
ATP7B-215ENST00000634844 PCGF6Q9BYE7 350 aa15.06■□□□□ 0
ATP7B-215ENST00000634844 LOC105371045A0A1W2PR82 267 aa15.04■□□□□ -0
ATP7B-215ENST00000634844 RB1CC1Q8TDY2 1594 aa15.02□□□□□ -0.01
ATP7B-215ENST00000634844 FAM9AQ8IZU1 332 aaPredicted RBP14.99□□□□□ -0.01
ATP7B-215ENST00000634844 HRCP23327 699 aa14.89□□□□□ -0.03
ATP7B-215ENST00000634844 CECR2Q9BXF3 1484 aa14.88□□□□□ -0.03
ATP7B-215ENST00000634844 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
ATP7B-215ENST00000634844 TRIM26Q12899 539 aaPredicted RBP14.83□□□□□ -0.04
ATP7B-215ENST00000634844 MROH2BQ7Z745 1585 aa14.82□□□□□ -0.04
ATP7B-215ENST00000634844 BAZ1AQ9NRL2 1556 aaPredicted RBP14.79□□□□□ -0.04
ATP7B-215ENST00000634844 PABPN1Q86U42 306 aaKnown RBP eCLIP14.73□□□□□ -0.05
ATP7B-215ENST00000634844 WIZO95785 1651 aa14.7□□□□□ -0.06
ATP7B-215ENST00000634844 ZEB1P37275 1124 aaPredicted RBP14.63□□□□□ -0.07
ATP7B-215ENST00000634844 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
ATP7B-215ENST00000634844 SMARCA4P51532 1647 aa14.57□□□□□ -0.08
ATP7B-215ENST00000634844 UBTFP17480 764 aaKnown RBP14.52□□□□□ -0.09
ATP7B-215ENST00000634844 CCDC88BA6NC98 1476 aa14.51□□□□□ -0.09
ATP7B-215ENST00000634844 PPARGC1BQ86YN6 1023 aaKnown RBP14.48□□□□□ -0.09
ATP7B-215ENST00000634844 CSRNP3Q8WYN3 585 aa14.43□□□□□ -0.1
ATP7B-215ENST00000634844 UNC13AQ9UPW8 1703 aa14.41□□□□□ -0.1
ATP7B-215ENST00000634844 SMARCA2P51531 1590 aa14.41□□□□□ -0.1
ATP7B-215ENST00000634844 EEA1Q15075 1411 aa14.4□□□□□ -0.1
ATP7B-215ENST00000634844 ABCC8Q09428 1581 aa14.38□□□□□ -0.11
ATP7B-215ENST00000634844 APLP2Q06481 763 aa14.37□□□□□ -0.11
ATP7B-215ENST00000634844 TTBK1Q5TCY1 1321 aaPredicted RBP14.37□□□□□ -0.11
ATP7B-215ENST00000634844 BAZ1BQ9UIG0 1483 aaKnown RBP14.36□□□□□ -0.11
ATP7B-215ENST00000634844 CCER1Q8TC90 406 aaPredicted RBP14.34□□□□□ -0.11
ATP7B-215ENST00000634844 WRNQ14191 1432 aaPredicted RBP eCLIP14.34□□□□□ -0.11
ATP7B-215ENST00000634844 BICRAQ9NZM4 1560 aa14.33□□□□□ -0.12
ATP7B-215ENST00000634844 ATAD2BQ9ULI0 1458 aa14.28□□□□□ -0.12
ATP7B-215ENST00000634844 TNIKQ9UKE5 1360 aa14.28□□□□□ -0.12
ATP7B-215ENST00000634844 SOGA1O94964 1423 aa14.28□□□□□ -0.12
ATP7B-215ENST00000634844 CEP162Q5TB80 1403 aa14.26□□□□□ -0.13
ATP7B-215ENST00000634844 EIF4G1Q04637 1599 aaKnown RBP14.26□□□□□ -0.13
ATP7B-215ENST00000634844 GOLGA3Q08378 1498 aa14.24□□□□□ -0.13
ATP7B-215ENST00000634844 RANGAP1P46060 587 aaPredicted RBP14.23□□□□□ -0.13
ATP7B-215ENST00000634844 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
ATP7B-215ENST00000634844 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.2□□□□□ -0.14
ATP7B-215ENST00000634844 CEP164Q9UPV0 1460 aa14.18□□□□□ -0.14
ATP7B-215ENST00000634844 DNAJC5BQ9UF47 199 aa14.13□□□□□ -0.15
ATP7B-215ENST00000634844 RUSC2Q8N2Y8 1516 aa14.12□□□□□ -0.15
ATP7B-215ENST00000634844 CLIP1P30622 1438 aa14.1□□□□□ -0.15
ATP7B-215ENST00000634844 PELP1Q8IZL8 1130 aaKnown RBP14.07□□□□□ -0.16
ATP7B-215ENST00000634844 NCAPD3P42695 1498 aa14.05□□□□□ -0.16
ATP7B-215ENST00000634844 HNRNPUL2Q1KMD3 747 aaKnown RBP14.04□□□□□ -0.16
ATP7B-215ENST00000634844 SYNJ1O43426 1573 aa14.04□□□□□ -0.16
ATP7B-215ENST00000634844 HMGXB3Q12766 1538 aa13.99□□□□□ -0.17
ATP7B-215ENST00000634844 KIF27Q86VH2 1401 aa13.99□□□□□ -0.17
ATP7B-215ENST00000634844 KIF21BO75037 1637 aa13.98□□□□□ -0.17
ATP7B-215ENST00000634844 VPS8Q8N3P4 1428 aa13.96□□□□□ -0.18
ATP7B-215ENST00000634844 AEBP2Q6ZN18 517 aaPredicted RBP13.95□□□□□ -0.18
ATP7B-215ENST00000634844 RAPGEF2Q9Y4G8 1499 aa13.95□□□□□ -0.18
ATP7B-215ENST00000634844 TOP2BQ02880 1626 aa13.94□□□□□ -0.18
ATP7B-215ENST00000634844 DIEXFQ68CQ4 756 aaKnown RBP13.9□□□□□ -0.19
ATP7B-215ENST00000634844 CFTRP13569 1480 aa13.88□□□□□ -0.19
ATP7B-215ENST00000634844 CENPBP07199 599 aaPredicted RBP13.87□□□□□ -0.19
ATP7B-215ENST00000634844 CADPSQ9ULU8 1353 aa13.87□□□□□ -0.19
ATP7B-215ENST00000634844 ATP1B4Q9UN42 357 aaPredicted RBP13.86□□□□□ -0.19
ATP7B-215ENST00000634844 BIVM-ERCC5R4GMW8 1640 aa13.83□□□□□ -0.2
ATP7B-215ENST00000634844 ERICH3Q5RHP9 1530 aa13.83□□□□□ -0.2
ATP7B-215ENST00000634844 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
ATP7B-215ENST00000634844 CUX2O14529 1486 aa13.82□□□□□ -0.2
ATP7B-215ENST00000634844 CUX1P39880 1505 aa13.81□□□□□ -0.2
ATP7B-215ENST00000634844 TRHP20396 242 aaPredicted RBP13.81□□□□□ -0.2
ATP7B-215ENST00000634844 PRXQ9BXM0 1461 aa13.8□□□□□ -0.2
ATP7B-215ENST00000634844 ITGAEP38570 1179 aa13.78□□□□□ -0.2
ATP7B-215ENST00000634844 CARMIL1Q5VZK9 1371 aa13.76□□□□□ -0.21
ATP7B-215ENST00000634844 P3H3Q8IVL6 736 aa13.7□□□□□ -0.22
ATP7B-215ENST00000634844 IGF1RP08069 1367 aa13.7□□□□□ -0.22
ATP7B-215ENST00000634844 FANCD2Q9BXW9 1451 aa13.7□□□□□ -0.22
ATP7B-215ENST00000634844 CC2D2AQ9P2K1 1620 aa13.69□□□□□ -0.22
ATP7B-215ENST00000634844 FGD5Q6ZNL6 1462 aa13.69□□□□□ -0.22
ATP7B-215ENST00000634844 KANK4Q5T7N3 995 aaPredicted RBP13.69□□□□□ -0.22
ATP7B-215ENST00000634844 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
ATP7B-215ENST00000634844 FAM50AQ14320 339 aaKnown RBP13.67□□□□□ -0.22
ATP7B-215ENST00000634844 ARAP1Q96P48 1450 aa13.67□□□□□ -0.22
ATP7B-215ENST00000634844 FHAD1B1AJZ9 1412 aa13.65□□□□□ -0.22
ATP7B-215ENST00000634844 ERCC6Q03468 1493 aa13.64□□□□□ -0.23
ATP7B-215ENST00000634844 DNAJC5Q9H3Z4 198 aa13.64□□□□□ -0.23
ATP7B-215ENST00000634844 CCNB3Q8WWL7 1395 aa13.64□□□□□ -0.23
ATP7B-215ENST00000634844 ACIN1Q9UKV3 1341 aaKnown RBP13.63□□□□□ -0.23
ATP7B-215ENST00000634844 YTHDC1Q96MU7 727 aaKnown RBP13.62□□□□□ -0.23
ATP7B-215ENST00000634844 ARHGAP35Q9NRY4 1499 aa13.61□□□□□ -0.23
ATP7B-215ENST00000634844 FBLN2P98095 1184 aa13.61□□□□□ -0.23
ATP7B-215ENST00000634844 PRDM2Q13029 1718 aa13.6□□□□□ -0.23
ATP7B-215ENST00000634844 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms