RNA–Protein interactions for RNA: ENST00000442250.5

ITGA6-206, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,393 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-206ENST00000442250 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
ITGA6-206ENST00000442250 DCAF8L2P0C7V8 631 aa17.22■□□□□ 0.35
ITGA6-206ENST00000442250 SHROOM4Q9ULL8 1493 aa16.87■□□□□ 0.29
ITGA6-206ENST00000442250 SUPT5HO00267 1087 aaKnown RBP16.36■□□□□ 0.21
ITGA6-206ENST00000442250 ABCC9O60706 1549 aa16.32■□□□□ 0.2
ITGA6-206ENST00000442250 CCDC180Q9P1Z9 1646 aa16.28■□□□□ 0.2
ITGA6-206ENST00000442250 ZCCHC6Q5VYS8 1495 aaKnown RBP16.11■□□□□ 0.17
ITGA6-206ENST00000442250 PABPN1Q86U42 306 aaKnown RBP eCLIP15.75■□□□□ 0.11
ITGA6-206ENST00000442250 SCRIBQ14160 1630 aa15.73■□□□□ 0.11
ITGA6-206ENST00000442250 HRCP23327 699 aa15.57■□□□□ 0.08
ITGA6-206ENST00000442250 PPARGC1BQ86YN6 1023 aaKnown RBP15.55■□□□□ 0.08
ITGA6-206ENST00000442250 DCAF1Q9Y4B6 1507 aa15.47■□□□□ 0.07
ITGA6-206ENST00000442250 PCGF6Q9BYE7 350 aa15.46■□□□□ 0.07
ITGA6-206ENST00000442250 EHMT2Q96KQ7 1210 aa15.44■□□□□ 0.06
ITGA6-206ENST00000442250 NACADO15069 1562 aa15.37■□□□□ 0.05
ITGA6-206ENST00000442250 RB1CC1Q8TDY2 1594 aa15.35■□□□□ 0.05
ITGA6-206ENST00000442250 CECR2Q9BXF3 1484 aa15.31■□□□□ 0.04
ITGA6-206ENST00000442250 FAM9AQ8IZU1 332 aaPredicted RBP15.27■□□□□ 0.04
ITGA6-206ENST00000442250 CHIC1Q5VXU3 224 aa15.24■□□□□ 0.03
ITGA6-206ENST00000442250 RSF1Q96T23 1441 aaPredicted RBP15.19■□□□□ 0.02
ITGA6-206ENST00000442250 MYO15BQ96JP2 1530 aa15.15■□□□□ 0.02
ITGA6-206ENST00000442250 MROH2BQ7Z745 1585 aa15.09■□□□□ 0.01
ITGA6-206ENST00000442250 TRIM41Q8WV44 630 aa15.08■□□□□ 0
ITGA6-206ENST00000442250 LOC105371045A0A1W2PR82 267 aa15.06■□□□□ 0
ITGA6-206ENST00000442250 PELP1Q8IZL8 1130 aaKnown RBP15.03■□□□□ -0
ITGA6-206ENST00000442250 WIZO95785 1651 aa14.96□□□□□ -0.02
ITGA6-206ENST00000442250 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
ITGA6-206ENST00000442250 UNC13AQ9UPW8 1703 aa14.89□□□□□ -0.03
ITGA6-206ENST00000442250 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
ITGA6-206ENST00000442250 BAZ1AQ9NRL2 1556 aaPredicted RBP14.83□□□□□ -0.04
ITGA6-206ENST00000442250 RANGAP1P46060 587 aaPredicted RBP14.8□□□□□ -0.04
ITGA6-206ENST00000442250 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
ITGA6-206ENST00000442250 TTBK1Q5TCY1 1321 aaPredicted RBP14.73□□□□□ -0.05
ITGA6-206ENST00000442250 CCDC88BA6NC98 1476 aa14.69□□□□□ -0.06
ITGA6-206ENST00000442250 TRIM26Q12899 539 aaPredicted RBP14.68□□□□□ -0.06
ITGA6-206ENST00000442250 BAZ1BQ9UIG0 1483 aaKnown RBP14.66□□□□□ -0.06
ITGA6-206ENST00000442250 DNAJC5BQ9UF47 199 aa14.64□□□□□ -0.07
ITGA6-206ENST00000442250 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
ITGA6-206ENST00000442250 ABCC8Q09428 1581 aa14.6□□□□□ -0.07
ITGA6-206ENST00000442250 UBTFP17480 764 aaKnown RBP14.58□□□□□ -0.08
ITGA6-206ENST00000442250 TOP2AP11388 1531 aaKnown RBP14.56□□□□□ -0.08
ITGA6-206ENST00000442250 EIF4G1Q04637 1599 aaKnown RBP14.53□□□□□ -0.08
ITGA6-206ENST00000442250 SMARCA2P51531 1590 aa14.5□□□□□ -0.09
ITGA6-206ENST00000442250 NEUROD1Q13562 356 aa14.5□□□□□ -0.09
ITGA6-206ENST00000442250 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
ITGA6-206ENST00000442250 GTF3C3Q9Y5Q9 886 aa14.47□□□□□ -0.09
ITGA6-206ENST00000442250 ACIN1Q9UKV3 1341 aaKnown RBP14.44□□□□□ -0.1
ITGA6-206ENST00000442250 SOGA1O94964 1423 aa14.42□□□□□ -0.1
ITGA6-206ENST00000442250 MYT1Q01538 1121 aa14.4□□□□□ -0.1
ITGA6-206ENST00000442250 WRNQ14191 1432 aaPredicted RBP eCLIP14.38□□□□□ -0.11
ITGA6-206ENST00000442250 RUSC2Q8N2Y8 1516 aa14.37□□□□□ -0.11
ITGA6-206ENST00000442250 CSRNP3Q8WYN3 585 aa14.37□□□□□ -0.11
ITGA6-206ENST00000442250 CC2D2AQ9P2K1 1620 aa14.36□□□□□ -0.11
ITGA6-206ENST00000442250 NCAPD3P42695 1498 aa14.32□□□□□ -0.12
ITGA6-206ENST00000442250 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.3□□□□□ -0.12
ITGA6-206ENST00000442250 NESP48681 1621 aa14.28□□□□□ -0.12
ITGA6-206ENST00000442250 YTHDC1Q96MU7 727 aaKnown RBP14.28□□□□□ -0.12
ITGA6-206ENST00000442250 CENPBP07199 599 aaPredicted RBP14.26□□□□□ -0.13
ITGA6-206ENST00000442250 ATP1B4Q9UN42 357 aaPredicted RBP14.25□□□□□ -0.13
ITGA6-206ENST00000442250 CCER1Q8TC90 406 aaPredicted RBP14.23□□□□□ -0.13
ITGA6-206ENST00000442250 PEG3Q9GZU2 1588 aa14.22□□□□□ -0.13
ITGA6-206ENST00000442250 DIEXFQ68CQ4 756 aaKnown RBP14.21□□□□□ -0.13
ITGA6-206ENST00000442250 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.13
ITGA6-206ENST00000442250 P3H3Q8IVL6 736 aa14.2□□□□□ -0.14
ITGA6-206ENST00000442250 SYNJ1O43426 1573 aa14.17□□□□□ -0.14
ITGA6-206ENST00000442250 HMGXB3Q12766 1538 aa14.13□□□□□ -0.15
ITGA6-206ENST00000442250 APLP2Q06481 763 aa14.12□□□□□ -0.15
ITGA6-206ENST00000442250 CFTRP13569 1480 aa14.1□□□□□ -0.15
ITGA6-206ENST00000442250 FBLN2P98095 1184 aa14.09□□□□□ -0.15
ITGA6-206ENST00000442250 FANCD2Q9BXW9 1451 aa14.08□□□□□ -0.16
ITGA6-206ENST00000442250 CUX2O14529 1486 aa14.05□□□□□ -0.16
ITGA6-206ENST00000442250 TDRD9Q8NDG6 1382 aaKnown RBP14.05□□□□□ -0.16
ITGA6-206ENST00000442250 ARID3CA6NKF2 412 aa14.05□□□□□ -0.16
ITGA6-206ENST00000442250 CEP162Q5TB80 1403 aa14.04□□□□□ -0.16
ITGA6-206ENST00000442250 RAD54L2Q9Y4B4 1467 aa14.04□□□□□ -0.16
ITGA6-206ENST00000442250 CUX1P39880 1505 aa14.04□□□□□ -0.16
ITGA6-206ENST00000442250 RAPGEF2Q9Y4G8 1499 aa14.02□□□□□ -0.17
ITGA6-206ENST00000442250 HNRNPUL2Q1KMD3 747 aaKnown RBP14□□□□□ -0.17
ITGA6-206ENST00000442250 ITGAEP38570 1179 aa14□□□□□ -0.17
ITGA6-206ENST00000442250 KIF27Q86VH2 1401 aa13.98□□□□□ -0.17
ITGA6-206ENST00000442250 FGD5Q6ZNL6 1462 aa13.97□□□□□ -0.17
ITGA6-206ENST00000442250 GOLGA3Q08378 1498 aa13.97□□□□□ -0.17
ITGA6-206ENST00000442250 ERCC6Q03468 1493 aa13.96□□□□□ -0.18
ITGA6-206ENST00000442250 CLIP1P30622 1438 aa13.94□□□□□ -0.18
ITGA6-206ENST00000442250 TNIKQ9UKE5 1360 aa13.94□□□□□ -0.18
ITGA6-206ENST00000442250 CEP164Q9UPV0 1460 aa13.94□□□□□ -0.18
ITGA6-206ENST00000442250 PDS5BQ9NTI5 1447 aa13.93□□□□□ -0.18
ITGA6-206ENST00000442250 EEA1Q15075 1411 aa13.93□□□□□ -0.18
ITGA6-206ENST00000442250 TOP2BQ02880 1626 aa13.9□□□□□ -0.18
ITGA6-206ENST00000442250 CARMIL1Q5VZK9 1371 aa13.9□□□□□ -0.18
ITGA6-206ENST00000442250 IGF1RP08069 1367 aa13.88□□□□□ -0.19
ITGA6-206ENST00000442250 MIER1Q8N108 512 aa13.86□□□□□ -0.19
ITGA6-206ENST00000442250 TOPBP1Q92547 1522 aa13.85□□□□□ -0.19
ITGA6-206ENST00000442250 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
ITGA6-206ENST00000442250 AQRO60306 1485 aaKnown RBP eCLIP13.84□□□□□ -0.19
ITGA6-206ENST00000442250 URB2Q14146 1524 aaKnown RBP13.82□□□□□ -0.2
ITGA6-206ENST00000442250 ZNF316A6NFI3 1004 aaPredicted RBP13.82□□□□□ -0.2
ITGA6-206ENST00000442250 KANK4Q5T7N3 995 aaPredicted RBP13.8□□□□□ -0.2
ITGA6-206ENST00000442250 BCL11AQ9H165 835 aa13.79□□□□□ -0.2
ITGA6-206ENST00000442250 CHMP7Q8WUX9 453 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 99.9 ms