RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 NISCHQ9Y2I1 1504 aa40.83■■■■■ 4.13
TARDBP-203ENST00000439080 CCDC180Q9P1Z9 1646 aa36.32■■■■□ 3.4
TARDBP-203ENST00000439080 ABCC9O60706 1549 aa35.15■■■■□ 3.22
TARDBP-203ENST00000439080 ZCCHC6Q5VYS8 1495 aaKnown RBP34.11■■■■□ 3.05
TARDBP-203ENST00000439080 NACADO15069 1562 aa33.97■■■■□ 3.03
TARDBP-203ENST00000439080 RB1CC1Q8TDY2 1594 aa33.97■■■■□ 3.03
TARDBP-203ENST00000439080 DCAF8L2P0C7V8 631 aa33.85■■■■□ 3.01
TARDBP-203ENST00000439080 MYO15BQ96JP2 1530 aa33.84■■■■□ 3.01
TARDBP-203ENST00000439080 DCAF1Q9Y4B6 1507 aa33.81■■■■□ 3
TARDBP-203ENST00000439080 UNC13AQ9UPW8 1703 aa33.36■■■□□ 2.93
TARDBP-203ENST00000439080 SCRIBQ14160 1630 aa33.13■■■□□ 2.89
TARDBP-203ENST00000439080 BICRAQ9NZM4 1560 aa32.95■■■□□ 2.87
TARDBP-203ENST00000439080 PABPN1Q86U42 306 aaKnown RBP eCLIP32.79■■■□□ 2.84
TARDBP-203ENST00000439080 SHROOM4Q9ULL8 1493 aa32.61■■■□□ 2.81
TARDBP-203ENST00000439080 EIF4G1Q04637 1599 aaKnown RBP32.06■■■□□ 2.72
TARDBP-203ENST00000439080 DNAJC5BQ9UF47 199 aa31.89■■■□□ 2.7
TARDBP-203ENST00000439080 CC2D2AQ9P2K1 1620 aa31.87■■■□□ 2.69
TARDBP-203ENST00000439080 CECR2Q9BXF3 1484 aa31.75■■■□□ 2.67
TARDBP-203ENST00000439080 SMARCA4P51532 1647 aa31.7■■■□□ 2.67
TARDBP-203ENST00000439080 BAZ1AQ9NRL2 1556 aaPredicted RBP31.65■■■□□ 2.66
TARDBP-203ENST00000439080 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
TARDBP-203ENST00000439080 SMARCA2P51531 1590 aa31.39■■■□□ 2.62
TARDBP-203ENST00000439080 ATAD2BQ9ULI0 1458 aa31.36■■■□□ 2.61
TARDBP-203ENST00000439080 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
TARDBP-203ENST00000439080 NCAPD3P42695 1498 aa31.28■■■□□ 2.6
TARDBP-203ENST00000439080 HMGXB3Q12766 1538 aa31.26■■■□□ 2.59
TARDBP-203ENST00000439080 WIZO95785 1651 aa31.22■■■□□ 2.59
TARDBP-203ENST00000439080 BAZ1BQ9UIG0 1483 aaKnown RBP31.16■■■□□ 2.58
TARDBP-203ENST00000439080 RSF1Q96T23 1441 aaPredicted RBP31.15■■■□□ 2.58
TARDBP-203ENST00000439080 TOP2AP11388 1531 aaKnown RBP30.88■■■□□ 2.53
TARDBP-203ENST00000439080 LAMC3Q9Y6N6 1575 aa30.51■■■□□ 2.47
TARDBP-203ENST00000439080 NESP48681 1621 aa30.51■■■□□ 2.47
TARDBP-203ENST00000439080 SUPT5HO00267 1087 aaKnown RBP30.48■■■□□ 2.47
TARDBP-203ENST00000439080 CCDC88BA6NC98 1476 aa30.43■■■□□ 2.46
TARDBP-203ENST00000439080 CADPSQ9ULU8 1353 aa30.36■■■□□ 2.45
TARDBP-203ENST00000439080 PRDM2Q13029 1718 aa30.31■■■□□ 2.44
TARDBP-203ENST00000439080 KIF21AQ7Z4S6 1674 aa30.29■■■□□ 2.44
TARDBP-203ENST00000439080 CFTRP13569 1480 aa30.28■■■□□ 2.44
TARDBP-203ENST00000439080 ERCC6Q03468 1493 aa30.28■■■□□ 2.44
TARDBP-203ENST00000439080 PDS5BQ9NTI5 1447 aa30.2■■■□□ 2.43
TARDBP-203ENST00000439080 THOC2Q8NI27 1593 aaKnown RBP30.09■■■□□ 2.41
TARDBP-203ENST00000439080 FANCD2Q9BXW9 1451 aa30.07■■■□□ 2.4
TARDBP-203ENST00000439080 CEP164Q9UPV0 1460 aa30.04■■■□□ 2.4
TARDBP-203ENST00000439080 MRC2Q9UBG0 1479 aa29.94■■■□□ 2.38
TARDBP-203ENST00000439080 WDR62O43379 1518 aa29.88■■■□□ 2.37
TARDBP-203ENST00000439080 CUX2O14529 1486 aa29.87■■■□□ 2.37
TARDBP-203ENST00000439080 URB2Q14146 1524 aaKnown RBP29.78■■■□□ 2.36
TARDBP-203ENST00000439080 DNMBPQ6XZF7 1577 aa29.67■■■□□ 2.34
TARDBP-203ENST00000439080 TOPBP1Q92547 1522 aa29.65■■■□□ 2.34
TARDBP-203ENST00000439080 ABCC8Q09428 1581 aa29.61■■■□□ 2.33
TARDBP-203ENST00000439080 CUX1P39880 1505 aa29.54■■■□□ 2.32
TARDBP-203ENST00000439080 BIVM-ERCC5R4GMW8 1640 aa29.41■■■□□ 2.3
TARDBP-203ENST00000439080 POLA1P09884 1462 aaPredicted RBP29.41■■■□□ 2.3
TARDBP-203ENST00000439080 SYNJ1O43426 1573 aa29.4■■■□□ 2.3
TARDBP-203ENST00000439080 WRNQ14191 1432 aaPredicted RBP eCLIP29.39■■■□□ 2.296e-7■□□□□ 11.3
TARDBP-203ENST00000439080 FGD5Q6ZNL6 1462 aa29.38■■■□□ 2.29
TARDBP-203ENST00000439080 TOP2BQ02880 1626 aa29.38■■■□□ 2.29
TARDBP-203ENST00000439080 IFT140Q96RY7 1462 aa29.37■■■□□ 2.29
TARDBP-203ENST00000439080 TARBP1Q13395 1621 aaKnown RBP29.35■■■□□ 2.29
TARDBP-203ENST00000439080 WDR97A6NE52 1622 aa29.27■■■□□ 2.28
TARDBP-203ENST00000439080 RAD54L2Q9Y4B4 1467 aa29.25■■■□□ 2.27
TARDBP-203ENST00000439080 EIF4G3O43432 1585 aaKnown RBP29.24■■■□□ 2.27
TARDBP-203ENST00000439080 ZNF608Q9ULD9 1512 aaPredicted RBP29.23■■■□□ 2.27
TARDBP-203ENST00000439080 SOGA1O94964 1423 aa29.21■■■□□ 2.27
TARDBP-203ENST00000439080 ABCA10Q8WWZ4 1543 aa29.1■■■□□ 2.25
TARDBP-203ENST00000439080 ABCA5Q8WWZ7 1642 aa29.05■■■□□ 2.24
TARDBP-203ENST00000439080 AQRO60306 1485 aaKnown RBP eCLIP29.05■■■□□ 2.242e-7■■□□□ 14.3
TARDBP-203ENST00000439080 PBRM1Q86U86 1689 aa29.03■■■□□ 2.24
TARDBP-203ENST00000439080 TDRD9Q8NDG6 1382 aaKnown RBP29.01■■■□□ 2.23
TARDBP-203ENST00000439080 GAPVD1Q14C86 1478 aa28.94■■■□□ 2.22
TARDBP-203ENST00000439080 GRIN2BQ13224 1484 aa28.89■■■□□ 2.21
TARDBP-203ENST00000439080 SNAPC4Q5SXM2 1469 aa28.86■■■□□ 2.21
TARDBP-203ENST00000439080 CHD1O14646 1710 aa28.85■■■□□ 2.21
TARDBP-203ENST00000439080 MAGI1Q96QZ7 1491 aaPredicted RBP28.82■■■□□ 2.2
TARDBP-203ENST00000439080 ERICH3Q5RHP9 1530 aa28.78■■■□□ 2.2
TARDBP-203ENST00000439080 TRIM41Q8WV44 630 aa28.77■■■□□ 2.2
TARDBP-203ENST00000439080 ADAMTS12P58397 1594 aa28.76■■■□□ 2.19
TARDBP-203ENST00000439080 KIF27Q86VH2 1401 aa28.74■■■□□ 2.19
TARDBP-203ENST00000439080 SYNJ2O15056 1496 aa28.69■■■□□ 2.18
TARDBP-203ENST00000439080 CUL7Q14999 1698 aa28.64■■■□□ 2.17
TARDBP-203ENST00000439080 FHAD1B1AJZ9 1412 aa28.59■■■□□ 2.17
TARDBP-203ENST00000439080 FBLN2P98095 1184 aa28.59■■■□□ 2.17
TARDBP-203ENST00000439080 CHIC1Q5VXU3 224 aa28.58■■■□□ 2.17
TARDBP-203ENST00000439080 RUSC2Q8N2Y8 1516 aa28.58■■■□□ 2.17
TARDBP-203ENST00000439080 GRIN2AQ12879 1464 aa28.55■■■□□ 2.16
TARDBP-203ENST00000439080 OSCARQ8IYS5 282 aa28.54■■■□□ 2.16
TARDBP-203ENST00000439080 CHMP7Q8WUX9 453 aaPredicted RBP28.54■■■□□ 2.16
TARDBP-203ENST00000439080 IGF1RP08069 1367 aa28.53■■■□□ 2.16
TARDBP-203ENST00000439080 DNAJC5Q9H3Z4 198 aa28.5■■■□□ 2.15
TARDBP-203ENST00000439080 CLASP1Q7Z460 1538 aa28.46■■■□□ 2.15
TARDBP-203ENST00000439080 CEP170Q5SW79 1584 aa28.45■■■□□ 2.14
TARDBP-203ENST00000439080 NUP160Q12769 1436 aa28.39■■■□□ 2.14
TARDBP-203ENST00000439080 CARMIL1Q5VZK9 1371 aa28.38■■■□□ 2.13
TARDBP-203ENST00000439080 EEA1Q15075 1411 aa28.37■■■□□ 2.13
TARDBP-203ENST00000439080 RAPGEF2Q9Y4G8 1499 aa28.3■■■□□ 2.12
TARDBP-203ENST00000439080 PRXQ9BXM0 1461 aa28.26■■■□□ 2.11
TARDBP-203ENST00000439080 RIMBP3CA6NJZ7 1639 aa28.26■■■□□ 2.11
TARDBP-203ENST00000439080 RIMBP3BA6NNM3 1639 aa28.26■■■□□ 2.11
TARDBP-203ENST00000439080 RIMBP3Q9UFD9 1639 aa28.26■■■□□ 2.11
TARDBP-203ENST00000439080 ARHGEF11O15085 1522 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms