RNA–Protein interactions for RNA: ENST00000458358.5

ITGA6-207, Transcript of integrin subunit alpha 6, humanhuman

TSL 5 BASIC

Gene ITGA6, Length 3,261 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA6-207ENST00000458358 NISCHQ9Y2I1 1504 aa20.15■□□□□ 0.82
ITGA6-207ENST00000458358 DCAF8L2P0C7V8 631 aa17.73■□□□□ 0.43
ITGA6-207ENST00000458358 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
ITGA6-207ENST00000458358 CCDC180Q9P1Z9 1646 aa17.08■□□□□ 0.32
ITGA6-207ENST00000458358 ABCC9O60706 1549 aa16.93■□□□□ 0.3
ITGA6-207ENST00000458358 SUPT5HO00267 1087 aaKnown RBP16.9■□□□□ 0.3
ITGA6-207ENST00000458358 ZCCHC6Q5VYS8 1495 aaKnown RBP16.86■□□□□ 0.29
ITGA6-207ENST00000458358 HRCP23327 699 aa16.55■□□□□ 0.24
ITGA6-207ENST00000458358 PCGF6Q9BYE7 350 aa16.4■□□□□ 0.22
ITGA6-207ENST00000458358 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
ITGA6-207ENST00000458358 MYO15BQ96JP2 1530 aa16.32■□□□□ 0.2
ITGA6-207ENST00000458358 PPARGC1BQ86YN6 1023 aaKnown RBP16.3■□□□□ 0.2
ITGA6-207ENST00000458358 CHIC1Q5VXU3 224 aa16.3■□□□□ 0.2
ITGA6-207ENST00000458358 PABPN1Q86U42 306 aaKnown RBP eCLIP16.29■□□□□ 0.2
ITGA6-207ENST00000458358 DCAF1Q9Y4B6 1507 aa16.26■□□□□ 0.19
ITGA6-207ENST00000458358 NACADO15069 1562 aa16.09■□□□□ 0.17
ITGA6-207ENST00000458358 RB1CC1Q8TDY2 1594 aa16.03■□□□□ 0.16
ITGA6-207ENST00000458358 LOC105371045A0A1W2PR82 267 aa15.97■□□□□ 0.15
ITGA6-207ENST00000458358 CECR2Q9BXF3 1484 aa15.94■□□□□ 0.14
ITGA6-207ENST00000458358 RSF1Q96T23 1441 aaPredicted RBP15.85■□□□□ 0.13
ITGA6-207ENST00000458358 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
ITGA6-207ENST00000458358 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
ITGA6-207ENST00000458358 FAM9AQ8IZU1 332 aaPredicted RBP15.74■□□□□ 0.11
ITGA6-207ENST00000458358 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
ITGA6-207ENST00000458358 PELP1Q8IZL8 1130 aaKnown RBP15.71■□□□□ 0.11
ITGA6-207ENST00000458358 ZEB1P37275 1124 aaPredicted RBP15.63■□□□□ 0.09
ITGA6-207ENST00000458358 TRIM41Q8WV44 630 aa15.63■□□□□ 0.09
ITGA6-207ENST00000458358 SCAF1Q9H7N4 1312 aaKnown RBP15.6■□□□□ 0.09
ITGA6-207ENST00000458358 WIZO95785 1651 aa15.59■□□□□ 0.09
ITGA6-207ENST00000458358 UNC13AQ9UPW8 1703 aa15.58■□□□□ 0.09
ITGA6-207ENST00000458358 BICRAQ9NZM4 1560 aa15.54■□□□□ 0.08
ITGA6-207ENST00000458358 BAZ1AQ9NRL2 1556 aaPredicted RBP15.5■□□□□ 0.07
ITGA6-207ENST00000458358 SMARCA4P51532 1647 aa15.41■□□□□ 0.06
ITGA6-207ENST00000458358 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
ITGA6-207ENST00000458358 BAZ1BQ9UIG0 1483 aaKnown RBP15.27■□□□□ 0.03
ITGA6-207ENST00000458358 ACIN1Q9UKV3 1341 aaKnown RBP15.26■□□□□ 0.03
ITGA6-207ENST00000458358 ATAD2BQ9ULI0 1458 aa15.26■□□□□ 0.03
ITGA6-207ENST00000458358 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.25■□□□□ 0.03
ITGA6-207ENST00000458358 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
ITGA6-207ENST00000458358 TOP2AP11388 1531 aaKnown RBP15.23■□□□□ 0.03
ITGA6-207ENST00000458358 CCER1Q8TC90 406 aaPredicted RBP15.23■□□□□ 0.03
ITGA6-207ENST00000458358 RANGAP1P46060 587 aaPredicted RBP15.21■□□□□ 0.03
ITGA6-207ENST00000458358 ABCC8Q09428 1581 aa15.19■□□□□ 0.02
ITGA6-207ENST00000458358 GTF3C3Q9Y5Q9 886 aa15.18■□□□□ 0.02
ITGA6-207ENST00000458358 EIF4G1Q04637 1599 aaKnown RBP15.17■□□□□ 0.02
ITGA6-207ENST00000458358 DNAJC5BQ9UF47 199 aa15.16■□□□□ 0.02
ITGA6-207ENST00000458358 SMARCA2P51531 1590 aa15.15■□□□□ 0.02
ITGA6-207ENST00000458358 CENPBP07199 599 aaPredicted RBP15.14■□□□□ 0.01
ITGA6-207ENST00000458358 TTBK1Q5TCY1 1321 aaPredicted RBP15.13■□□□□ 0.01
ITGA6-207ENST00000458358 DIEXFQ68CQ4 756 aaKnown RBP15.13■□□□□ 0.01
ITGA6-207ENST00000458358 UBTFP17480 764 aaKnown RBP15.07■□□□□ 0
ITGA6-207ENST00000458358 MYT1Q01538 1121 aa15.02■□□□□ -0
ITGA6-207ENST00000458358 SOGA1O94964 1423 aa15□□□□□ -0.01
ITGA6-207ENST00000458358 WRNQ14191 1432 aaPredicted RBP eCLIP14.98□□□□□ -0.01
ITGA6-207ENST00000458358 NCAPD3P42695 1498 aa14.98□□□□□ -0.01
ITGA6-207ENST00000458358 CC2D2AQ9P2K1 1620 aa14.96□□□□□ -0.01
ITGA6-207ENST00000458358 YTHDC1Q96MU7 727 aaKnown RBP14.96□□□□□ -0.02
ITGA6-207ENST00000458358 RUSC2Q8N2Y8 1516 aa14.94□□□□□ -0.02
ITGA6-207ENST00000458358 PEG3Q9GZU2 1588 aa14.94□□□□□ -0.02
ITGA6-207ENST00000458358 CSRNP3Q8WYN3 585 aa14.93□□□□□ -0.02
ITGA6-207ENST00000458358 ZNF316A6NFI3 1004 aaPredicted RBP14.84□□□□□ -0.03
ITGA6-207ENST00000458358 NESP48681 1621 aa14.83□□□□□ -0.03
ITGA6-207ENST00000458358 CADPSQ9ULU8 1353 aa14.82□□□□□ -0.04
ITGA6-207ENST00000458358 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
ITGA6-207ENST00000458358 SYNJ1O43426 1573 aa14.79□□□□□ -0.04
ITGA6-207ENST00000458358 MIER1Q8N108 512 aa14.75□□□□□ -0.05
ITGA6-207ENST00000458358 CFTRP13569 1480 aa14.73□□□□□ -0.05
ITGA6-207ENST00000458358 CEP162Q5TB80 1403 aa14.72□□□□□ -0.05
ITGA6-207ENST00000458358 HNRNPUL2Q1KMD3 747 aaKnown RBP14.68□□□□□ -0.06
ITGA6-207ENST00000458358 ATP1B4Q9UN42 357 aaPredicted RBP14.67□□□□□ -0.06
ITGA6-207ENST00000458358 FANCD2Q9BXW9 1451 aa14.67□□□□□ -0.06
ITGA6-207ENST00000458358 P3H3Q8IVL6 736 aa14.66□□□□□ -0.06
ITGA6-207ENST00000458358 CUX1P39880 1505 aa14.65□□□□□ -0.06
ITGA6-207ENST00000458358 TNIKQ9UKE5 1360 aa14.62□□□□□ -0.07
ITGA6-207ENST00000458358 CUX2O14529 1486 aa14.61□□□□□ -0.07
ITGA6-207ENST00000458358 APLP2Q06481 763 aa14.6□□□□□ -0.07
ITGA6-207ENST00000458358 RAPGEF2Q9Y4G8 1499 aa14.6□□□□□ -0.07
ITGA6-207ENST00000458358 RAD54L2Q9Y4B4 1467 aa14.59□□□□□ -0.07
ITGA6-207ENST00000458358 TDRD9Q8NDG6 1382 aaKnown RBP14.58□□□□□ -0.08
ITGA6-207ENST00000458358 GOLGA3Q08378 1498 aa14.57□□□□□ -0.08
ITGA6-207ENST00000458358 KIF27Q86VH2 1401 aa14.57□□□□□ -0.08
ITGA6-207ENST00000458358 EEA1Q15075 1411 aa14.56□□□□□ -0.08
ITGA6-207ENST00000458358 FGD5Q6ZNL6 1462 aa14.56□□□□□ -0.08
ITGA6-207ENST00000458358 TOP2BQ02880 1626 aa14.54□□□□□ -0.08
ITGA6-207ENST00000458358 FBLN2P98095 1184 aa14.52□□□□□ -0.08
ITGA6-207ENST00000458358 CEP164Q9UPV0 1460 aa14.52□□□□□ -0.08
ITGA6-207ENST00000458358 PDS5BQ9NTI5 1447 aa14.52□□□□□ -0.09
ITGA6-207ENST00000458358 CLIP1P30622 1438 aa14.51□□□□□ -0.09
ITGA6-207ENST00000458358 ERCC6Q03468 1493 aa14.47□□□□□ -0.09
ITGA6-207ENST00000458358 IGF1RP08069 1367 aa14.47□□□□□ -0.09
ITGA6-207ENST00000458358 CARMIL1Q5VZK9 1371 aa14.46□□□□□ -0.09
ITGA6-207ENST00000458358 ARID3CA6NKF2 412 aa14.46□□□□□ -0.1
ITGA6-207ENST00000458358 SUPT16HQ9Y5B9 1047 aaKnown RBP14.44□□□□□ -0.1
ITGA6-207ENST00000458358 TOPBP1Q92547 1522 aa14.44□□□□□ -0.1
ITGA6-207ENST00000458358 POLA1P09884 1462 aaPredicted RBP14.43□□□□□ -0.1
ITGA6-207ENST00000458358 ITGAEP38570 1179 aa14.42□□□□□ -0.1
ITGA6-207ENST00000458358 URB2Q14146 1524 aaKnown RBP14.42□□□□□ -0.1
ITGA6-207ENST00000458358 BIVM-ERCC5R4GMW8 1640 aa14.39□□□□□ -0.11
ITGA6-207ENST00000458358 AQRO60306 1485 aaKnown RBP eCLIP14.37□□□□□ -0.11
ITGA6-207ENST00000458358 LAMC3Q9Y6N6 1575 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms