RNA–Protein interactions for RNA: ENST00000613864.4

TARDBP-215, Transcript of TAR DNA binding protein, humanhuman

TSL 4

Gene TARDBP, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-215ENST00000613864 NISCHQ9Y2I1 1504 aa36.57■■■■□ 3.44
TARDBP-215ENST00000613864 ABCC9O60706 1549 aa33.12■■■□□ 2.89
TARDBP-215ENST00000613864 CCDC180Q9P1Z9 1646 aa32.87■■■□□ 2.85
TARDBP-215ENST00000613864 DNAJC5BQ9UF47 199 aa31.42■■■□□ 2.62
TARDBP-215ENST00000613864 RB1CC1Q8TDY2 1594 aa31.37■■■□□ 2.61
TARDBP-215ENST00000613864 NACADO15069 1562 aa31.13■■■□□ 2.57
TARDBP-215ENST00000613864 DCAF8L2P0C7V8 631 aa30.88■■■□□ 2.53
TARDBP-215ENST00000613864 PABPN1Q86U42 306 aaKnown RBP eCLIP30.82■■■□□ 2.52
TARDBP-215ENST00000613864 UNC13AQ9UPW8 1703 aa30.79■■■□□ 2.52
TARDBP-215ENST00000613864 MYO15BQ96JP2 1530 aa30.65■■■□□ 2.5
TARDBP-215ENST00000613864 BICRAQ9NZM4 1560 aa30.61■■■□□ 2.49
TARDBP-215ENST00000613864 ZCCHC6Q5VYS8 1495 aaKnown RBP30.25■■■□□ 2.43
TARDBP-215ENST00000613864 DCAF1Q9Y4B6 1507 aa30.18■■■□□ 2.42
TARDBP-215ENST00000613864 SHROOM4Q9ULL8 1493 aa30.01■■■□□ 2.4
TARDBP-215ENST00000613864 SCRIBQ14160 1630 aa29.93■■■□□ 2.38
TARDBP-215ENST00000613864 CC2D2AQ9P2K1 1620 aa29.93■■■□□ 2.38
TARDBP-215ENST00000613864 CECR2Q9BXF3 1484 aa29.84■■■□□ 2.37
TARDBP-215ENST00000613864 EIF4G1Q04637 1599 aaKnown RBP29.79■■■□□ 2.36
TARDBP-215ENST00000613864 DNAJC5Q9H3Z4 198 aa28.92■■■□□ 2.22
TARDBP-215ENST00000613864 NCAPD3P42695 1498 aa28.78■■■□□ 2.2
TARDBP-215ENST00000613864 ATAD2BQ9ULI0 1458 aa28.66■■■□□ 2.18
TARDBP-215ENST00000613864 CUX2O14529 1486 aa28.59■■■□□ 2.17
TARDBP-215ENST00000613864 SMARCA4P51532 1647 aa28.56■■■□□ 2.16
TARDBP-215ENST00000613864 ERCC6Q03468 1493 aa28.51■■■□□ 2.15
TARDBP-215ENST00000613864 HMGXB3Q12766 1538 aa28.5■■■□□ 2.15
TARDBP-215ENST00000613864 SMARCA2P51531 1590 aa28.5■■■□□ 2.15
TARDBP-215ENST00000613864 NESP48681 1621 aa28.43■■■□□ 2.14
TARDBP-215ENST00000613864 BAZ1AQ9NRL2 1556 aaPredicted RBP28.34■■■□□ 2.13
TARDBP-215ENST00000613864 PEG3Q9GZU2 1588 aa28.31■■■□□ 2.12
TARDBP-215ENST00000613864 BAZ1BQ9UIG0 1483 aaKnown RBP28.3■■■□□ 2.12
TARDBP-215ENST00000613864 MROH2BQ7Z745 1585 aa28.2■■■□□ 2.11
TARDBP-215ENST00000613864 THOC2Q8NI27 1593 aaKnown RBP28.16■■■□□ 2.1
TARDBP-215ENST00000613864 LAMC3Q9Y6N6 1575 aa28.11■■■□□ 2.09
TARDBP-215ENST00000613864 KIF21AQ7Z4S6 1674 aa28.03■■■□□ 2.08
TARDBP-215ENST00000613864 PDS5BQ9NTI5 1447 aa27.93■■■□□ 2.06
TARDBP-215ENST00000613864 CADPSQ9ULU8 1353 aa27.87■■■□□ 2.05
TARDBP-215ENST00000613864 WIZO95785 1651 aa27.85■■■□□ 2.05
TARDBP-215ENST00000613864 MRC2Q9UBG0 1479 aa27.73■■■□□ 2.03
TARDBP-215ENST00000613864 WDR62O43379 1518 aa27.7■■■□□ 2.02
TARDBP-215ENST00000613864 CEP164Q9UPV0 1460 aa27.55■■■□□ 2
TARDBP-215ENST00000613864 FANCD2Q9BXW9 1451 aa27.54■■■□□ 2
TARDBP-215ENST00000613864 RSF1Q96T23 1441 aaPredicted RBP27.53■■■□□ 2
TARDBP-215ENST00000613864 CFTRP13569 1480 aa27.52■■■□□ 2
TARDBP-215ENST00000613864 TRIM41Q8WV44 630 aa27.46■■□□□ 1.99
TARDBP-215ENST00000613864 TOP2AP11388 1531 aaKnown RBP27.42■■□□□ 1.98
TARDBP-215ENST00000613864 URB2Q14146 1524 aaKnown RBP27.39■■□□□ 1.98
TARDBP-215ENST00000613864 OSCARQ8IYS5 282 aa27.26■■□□□ 1.95
TARDBP-215ENST00000613864 PRDM2Q13029 1718 aa27.21■■□□□ 1.95
TARDBP-215ENST00000613864 CCDC88BA6NC98 1476 aa27.17■■□□□ 1.94
TARDBP-215ENST00000613864 ZNF608Q9ULD9 1512 aaPredicted RBP27.1■■□□□ 1.93
TARDBP-215ENST00000613864 IFT140Q96RY7 1462 aa27.03■■□□□ 1.92
TARDBP-215ENST00000613864 TOPBP1Q92547 1522 aa27.02■■□□□ 1.92
TARDBP-215ENST00000613864 RIMBP3CA6NJZ7 1639 aa26.98■■□□□ 1.91
TARDBP-215ENST00000613864 RIMBP3BA6NNM3 1639 aa26.98■■□□□ 1.91
TARDBP-215ENST00000613864 RIMBP3Q9UFD9 1639 aa26.98■■□□□ 1.91
TARDBP-215ENST00000613864 ABCC8Q09428 1581 aa26.88■■□□□ 1.89
TARDBP-215ENST00000613864 DNMBPQ6XZF7 1577 aa26.88■■□□□ 1.89
TARDBP-215ENST00000613864 EIF4G3O43432 1585 aaKnown RBP26.87■■□□□ 1.89
TARDBP-215ENST00000613864 ARHGEF11O15085 1522 aa26.85■■□□□ 1.89
TARDBP-215ENST00000613864 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.89
TARDBP-215ENST00000613864 AQRO60306 1485 aaKnown RBP eCLIP26.81■■□□□ 1.883e-7■■□□□ 14.2
TARDBP-215ENST00000613864 CHD1O14646 1710 aa26.74■■□□□ 1.87
TARDBP-215ENST00000613864 POLA1P09884 1462 aaPredicted RBP26.73■■□□□ 1.87
TARDBP-215ENST00000613864 AEBP2Q6ZN18 517 aaPredicted RBP26.66■■□□□ 1.86
TARDBP-215ENST00000613864 RAD54L2Q9Y4B4 1467 aa26.66■■□□□ 1.86
TARDBP-215ENST00000613864 CYB5RLQ6IPT4 315 aa26.65■■□□□ 1.86
TARDBP-215ENST00000613864 ARAP1Q96P48 1450 aa26.59■■□□□ 1.85
TARDBP-215ENST00000613864 TDRD9Q8NDG6 1382 aaKnown RBP26.58■■□□□ 1.85
TARDBP-215ENST00000613864 SOGA1O94964 1423 aa26.58■■□□□ 1.85
TARDBP-215ENST00000613864 FBLN2P98095 1184 aa26.58■■□□□ 1.85
TARDBP-215ENST00000613864 FGD5Q6ZNL6 1462 aa26.52■■□□□ 1.84
TARDBP-215ENST00000613864 CUX1P39880 1505 aa26.5■■□□□ 1.83
TARDBP-215ENST00000613864 SNAPC4Q5SXM2 1469 aa26.47■■□□□ 1.83
TARDBP-215ENST00000613864 CLASP1Q7Z460 1538 aa26.44■■□□□ 1.82
TARDBP-215ENST00000613864 WDR97A6NE52 1622 aa26.44■■□□□ 1.82
TARDBP-215ENST00000613864 MAGI1Q96QZ7 1491 aaPredicted RBP26.37■■□□□ 1.81
TARDBP-215ENST00000613864 GRIN2BQ13224 1484 aa26.36■■□□□ 1.81
TARDBP-215ENST00000613864 TRHP20396 242 aaPredicted RBP26.35■■□□□ 1.81
TARDBP-215ENST00000613864 CHMP7Q8WUX9 453 aaPredicted RBP26.35■■□□□ 1.81
TARDBP-215ENST00000613864 SYNJ1O43426 1573 aa26.31■■□□□ 1.8
TARDBP-215ENST00000613864 SYNJ2O15056 1496 aa26.3■■□□□ 1.8
TARDBP-215ENST00000613864 PBRM1Q86U86 1689 aa26.26■■□□□ 1.79
TARDBP-215ENST00000613864 GAPVD1Q14C86 1478 aa26.24■■□□□ 1.79
TARDBP-215ENST00000613864 ABCA10Q8WWZ4 1543 aa26.21■■□□□ 1.79
TARDBP-215ENST00000613864 ABCA5Q8WWZ7 1642 aa26.21■■□□□ 1.79
TARDBP-215ENST00000613864 SUPT5HO00267 1087 aaKnown RBP26.07■■□□□ 1.76
TARDBP-215ENST00000613864 ERCC6L2Q5T890 1561 aa26.07■■□□□ 1.76
TARDBP-215ENST00000613864 GRIN2AQ12879 1464 aa26.03■■□□□ 1.76
TARDBP-215ENST00000613864 WRNQ14191 1432 aaPredicted RBP eCLIP26.01■■□□□ 1.756e-7■□□□□ 11.3
TARDBP-215ENST00000613864 BIVM-ERCC5R4GMW8 1640 aa25.99■■□□□ 1.75
TARDBP-215ENST00000613864 ADAMTS12P58397 1594 aa25.99■■□□□ 1.75
TARDBP-215ENST00000613864 CEP170Q5SW79 1584 aa25.99■■□□□ 1.75
TARDBP-215ENST00000613864 NUP160Q12769 1436 aa25.98■■□□□ 1.75
TARDBP-215ENST00000613864 TOP2BQ02880 1626 aa25.98■■□□□ 1.75
TARDBP-215ENST00000613864 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
TARDBP-215ENST00000613864 FHAD1B1AJZ9 1412 aa25.89■■□□□ 1.74
TARDBP-215ENST00000613864 ERICH3Q5RHP9 1530 aa25.85■■□□□ 1.73
TARDBP-215ENST00000613864 PRG4Q92954 1404 aaPredicted RBP25.72■■□□□ 1.71
TARDBP-215ENST00000613864 JPH4Q96JJ6 628 aa25.71■■□□□ 1.71
TARDBP-215ENST00000613864 KIF13AQ9H1H9 1805 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms