RNA–Protein interactions for RNA: ENST00000355540.7

TRRAP-201, Transcript of transformation/transcription domain associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRRAP, Length 12,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRRAP-201ENST00000355540 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
TRRAP-201ENST00000355540 DCAF8L2P0C7V8 631 aa12□□□□□ -0.49
TRRAP-201ENST00000355540 NISCHQ9Y2I1 1504 aa11.99□□□□□ -0.49
TRRAP-201ENST00000355540 FAM9AQ8IZU1 332 aaPredicted RBP11.77□□□□□ -0.52
TRRAP-201ENST00000355540 MYT1Q01538 1121 aa11.64□□□□□ -0.55
TRRAP-201ENST00000355540 CCER1Q8TC90 406 aaPredicted RBP11.57□□□□□ -0.56
TRRAP-201ENST00000355540 YTHDC1Q96MU7 727 aaKnown RBP11.54□□□□□ -0.56
TRRAP-201ENST00000355540 APLP2Q06481 763 aa11.18□□□□□ -0.62
TRRAP-201ENST00000355540 SHROOM4Q9ULL8 1493 aa11.13□□□□□ -0.63
TRRAP-201ENST00000355540 SUPT5HO00267 1087 aaKnown RBP11.1□□□□□ -0.63
TRRAP-201ENST00000355540 ZEB1P37275 1124 aaPredicted RBP11.04□□□□□ -0.64
TRRAP-201ENST00000355540 ERICH6Q7L0X2 663 aa10.96□□□□□ -0.66
TRRAP-201ENST00000355540 CENPBP07199 599 aaPredicted RBP10.95□□□□□ -0.66
TRRAP-201ENST00000355540 NEFLP07196 543 aa10.78□□□□□ -0.68
TRRAP-201ENST00000355540 DAXXQ9UER7 740 aaPredicted RBP10.73□□□□□ -0.69
TRRAP-201ENST00000355540 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
TRRAP-201ENST00000355540 TTBK1Q5TCY1 1321 aaPredicted RBP10.69□□□□□ -0.7
TRRAP-201ENST00000355540 CLSPNQ9HAW4 1339 aa10.67□□□□□ -0.7
TRRAP-201ENST00000355540 NEFMP07197 916 aa10.65□□□□□ -0.7
TRRAP-201ENST00000355540 ABCC9O60706 1549 aa10.44□□□□□ -0.74
TRRAP-201ENST00000355540 ACIN1Q9UKV3 1341 aaKnown RBP10.42□□□□□ -0.74
TRRAP-201ENST00000355540 CCDC180Q9P1Z9 1646 aa10.41□□□□□ -0.74
TRRAP-201ENST00000355540 TRIM41Q8WV44 630 aa10.4□□□□□ -0.74
TRRAP-201ENST00000355540 RANGAP1P46060 587 aaPredicted RBP10.4□□□□□ -0.74
TRRAP-201ENST00000355540 MYT1LQ9UL68 1186 aa10.39□□□□□ -0.75
TRRAP-201ENST00000355540 ATP1B4Q9UN42 357 aaPredicted RBP10.37□□□□□ -0.75
TRRAP-201ENST00000355540 RTL5Q5HYW3 569 aaPredicted RBP10.35□□□□□ -0.75
TRRAP-201ENST00000355540 UBTFP17480 764 aaKnown RBP10.33□□□□□ -0.76
TRRAP-201ENST00000355540 EIF5BO60841 1220 aaKnown RBP10.32□□□□□ -0.76
TRRAP-201ENST00000355540 ZNF316A6NFI3 1004 aaPredicted RBP10.31□□□□□ -0.76
TRRAP-201ENST00000355540 GLIPR1L2Q4G1C9 344 aa10.26□□□□□ -0.77
TRRAP-201ENST00000355540 ZBTB47Q9UFB7 747 aaPredicted RBP10.25□□□□□ -0.77
TRRAP-201ENST00000355540 ANP32BQ92688 251 aaKnown RBP10.24□□□□□ -0.77
TRRAP-201ENST00000355540 PABPN1Q86U42 306 aaKnown RBP eCLIP10.18□□□□□ -0.78
TRRAP-201ENST00000355540 SCRIBQ14160 1630 aa10.17□□□□□ -0.78
TRRAP-201ENST00000355540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.12□□□□□ -0.79
TRRAP-201ENST00000355540 HNRNPUL2Q1KMD3 747 aaKnown RBP10.12□□□□□ -0.79
TRRAP-201ENST00000355540 ANP32EQ9BTT0 268 aa10.11□□□□□ -0.79
TRRAP-201ENST00000355540 PCGF6Q9BYE7 350 aa10.1□□□□□ -0.79
TRRAP-201ENST00000355540 RB1CC1Q8TDY2 1594 aa10.06□□□□□ -0.8
TRRAP-201ENST00000355540 ANO8Q9HCE9 1232 aaPredicted RBP10.03□□□□□ -0.8
TRRAP-201ENST00000355540 CDK11BP21127 795 aaKnown RBP10.02□□□□□ -0.81
TRRAP-201ENST00000355540 CDK11AQ9UQ88 783 aaPredicted RBP10.02□□□□□ -0.81
TRRAP-201ENST00000355540 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
TRRAP-201ENST00000355540 UPF2Q9HAU5 1272 aaKnown RBP9.99□□□□□ -0.81
TRRAP-201ENST00000355540 SLC24A1O60721 1099 aa9.99□□□□□ -0.81
TRRAP-201ENST00000355540 TRIM26Q12899 539 aaPredicted RBP9.96□□□□□ -0.82
TRRAP-201ENST00000355540 NACADO15069 1562 aa9.91□□□□□ -0.82
TRRAP-201ENST00000355540 ZCCHC6Q5VYS8 1495 aaKnown RBP9.91□□□□□ -0.82
TRRAP-201ENST00000355540 L1TD1Q5T7N2 865 aaKnown RBP9.89□□□□□ -0.83
TRRAP-201ENST00000355540 TRIM44Q96DX7 344 aaPredicted RBP9.89□□□□□ -0.83
TRRAP-201ENST00000355540 USP35Q9P2H5 1018 aa9.89□□□□□ -0.83
TRRAP-201ENST00000355540 ITGAEP38570 1179 aa9.87□□□□□ -0.83
TRRAP-201ENST00000355540 NCLP19338 710 aaKnown RBP9.87□□□□□ -0.83
TRRAP-201ENST00000355540 TNNT2P45379 298 aaPredicted RBP9.87□□□□□ -0.83
TRRAP-201ENST00000355540 CHIC1Q5VXU3 224 aa9.86□□□□□ -0.83
TRRAP-201ENST00000355540 ANP32AP39687 249 aaKnown RBP9.86□□□□□ -0.83
TRRAP-201ENST00000355540 FBLN2P98095 1184 aa9.86□□□□□ -0.83
TRRAP-201ENST00000355540 CFAP44Q96MT7 982 aa9.85□□□□□ -0.83
TRRAP-201ENST00000355540 PPARGC1BQ86YN6 1023 aaKnown RBP9.85□□□□□ -0.83
TRRAP-201ENST00000355540 CHMP4BQ9H444 224 aaKnown RBP9.83□□□□□ -0.84
TRRAP-201ENST00000355540 NRDCO43847 1150 aa9.81□□□□□ -0.84
TRRAP-201ENST00000355540 NEUROD1Q13562 356 aa9.81□□□□□ -0.84
TRRAP-201ENST00000355540 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.8□□□□□ -0.84
TRRAP-201ENST00000355540 HSP90AA1P07900 732 aaKnown RBP9.79□□□□□ -0.84
TRRAP-201ENST00000355540 POLR3GLQ9BT43 218 aa9.77□□□□□ -0.85
TRRAP-201ENST00000355540 CSRNP3Q8WYN3 585 aa9.77□□□□□ -0.85
TRRAP-201ENST00000355540 ANP32CO43423 234 aa9.76□□□□□ -0.85
TRRAP-201ENST00000355540 CANXP27824 592 aaKnown RBP9.76□□□□□ -0.85
TRRAP-201ENST00000355540 GOLGA6L6A8MZA4 724 aa9.75□□□□□ -0.85
TRRAP-201ENST00000355540 FAM50AQ14320 339 aaKnown RBP9.74□□□□□ -0.85
TRRAP-201ENST00000355540 SLC4A1APQ9BWU0 796 aaKnown RBP9.74□□□□□ -0.85
TRRAP-201ENST00000355540 GOLGA6L22H0YM25 854 aa9.73□□□□□ -0.85
TRRAP-201ENST00000355540 CHMP4AQ9BY43 222 aa9.72□□□□□ -0.85
TRRAP-201ENST00000355540 ESF1Q9H501 851 aaKnown RBP9.72□□□□□ -0.85
TRRAP-201ENST00000355540 MYH16Q9H6N6 1097 aa9.7□□□□□ -0.86
TRRAP-201ENST00000355540 HAP1P54257 671 aaPredicted RBP9.7□□□□□ -0.86
TRRAP-201ENST00000355540 LOC105371045A0A1W2PR82 267 aa9.69□□□□□ -0.86
TRRAP-201ENST00000355540 NPM2Q86SE8 214 aaKnown RBP9.68□□□□□ -0.86
TRRAP-201ENST00000355540 ZRSR1Q15695 479 aaKnown RBP9.67□□□□□ -0.86
TRRAP-201ENST00000355540 TRIM52Q96A61 297 aa9.67□□□□□ -0.86
TRRAP-201ENST00000355540 BECN1Q14457 450 aa9.65□□□□□ -0.86
TRRAP-201ENST00000355540 CASC1Q6TDU7 716 aa9.65□□□□□ -0.86
TRRAP-201ENST00000355540 BAZ1BQ9UIG0 1483 aaKnown RBP9.65□□□□□ -0.87
TRRAP-201ENST00000355540 ERCC6Q03468 1493 aa9.64□□□□□ -0.87
TRRAP-201ENST00000355540 EIF4G2P78344 907 aaKnown RBP eCLIP9.64□□□□□ -0.872e-71■■■■■ 42.8
TRRAP-201ENST00000355540 PTMSP20962 102 aa9.63□□□□□ -0.87
TRRAP-201ENST00000355540 CDCA8Q53HL2 280 aa9.63□□□□□ -0.87
TRRAP-201ENST00000355540 NPM1P06748 294 aaKnown RBP eCLIP9.61□□□□□ -0.87
TRRAP-201ENST00000355540 DDRGK1Q96HY6 314 aa9.61□□□□□ -0.87
TRRAP-201ENST00000355540 BCANQ96GW7 911 aa9.61□□□□□ -0.87
TRRAP-201ENST00000355540 CCDC34Q96HJ3 373 aa9.61□□□□□ -0.87
TRRAP-201ENST00000355540 AEBP2Q6ZN18 517 aaPredicted RBP9.6□□□□□ -0.87
TRRAP-201ENST00000355540 MS4A1P11836 297 aa9.6□□□□□ -0.87
TRRAP-201ENST00000355540 HMGB3O15347 200 aaKnown RBP9.58□□□□□ -0.88
TRRAP-201ENST00000355540 ARID3CA6NKF2 412 aa9.58□□□□□ -0.88
TRRAP-201ENST00000355540 PNNQ9H307 717 aaKnown RBP9.57□□□□□ -0.88
TRRAP-201ENST00000355540 CHAF1AQ13111 956 aaPredicted RBP9.57□□□□□ -0.88
TRRAP-201ENST00000355540 P3H3Q8IVL6 736 aa9.56□□□□□ -0.88
TRRAP-201ENST00000355540 BAZ1AQ9NRL2 1556 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms