Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 AL365209.1-201ENST00000624418 6473 ntBASIC14.54□□□□□ -0.08
ZNF550Q7Z398 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 AC090616.6-203ENST00000579186 1945 ntBASIC14.54□□□□□ -0.08
ZNF550Q7Z398 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
ZNF550Q7Z398 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 HYMAI-201ENST00000635591 3347 ntBASIC14.53□□□□□ -0.08
ZNF550Q7Z398 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 PPT1-215ENST00000641471 2368 ntBASIC14.53□□□□□ -0.08
ZNF550Q7Z398 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 SPDYE17-201ENST00000412399 783 ntBASIC14.53□□□□□ -0.08
ZNF550Q7Z398 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 IGHV3-42-201ENST00000520410 361 ntBASIC14.53□□□□□ -0.08
ZNF550Q7Z398 AL512356.2-201ENST00000546955 174 ntBASIC14.53□□□□□ -0.08
ZNF550Q7Z398 HNRNPUP1-201ENST00000554987 333 ntBASIC14.53□□□□□ -0.08
ZNF550Q7Z398 AC051619.7-201ENST00000568314 623 ntBASIC14.53□□□□□ -0.08
ZNF550Q7Z398 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 RN7SL828P-201ENST00000607615 303 ntBASIC14.53□□□□□ -0.08
ZNF550Q7Z398 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ZNF550Q7Z398 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 CEP170B-202ENST00000414716 6705 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 MYB-242ENST00000618728 3545 ntTSL 5 BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ZNF550Q7Z398 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF550Q7Z398 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF550Q7Z398 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ZNF550Q7Z398 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ZNF550Q7Z398 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms