RNA–Protein interactions for RNA: ENST00000400242.7

DEPDC5-203, Transcript of DEP domain containing 5, humanhuman

TSL 1 (best) BASIC

Gene DEPDC5, Length 2,395 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC5-203ENST00000400242 NISCHQ9Y2I1 1504 aa34.12■■■■□ 3.05
DEPDC5-203ENST00000400242 CCDC180Q9P1Z9 1646 aa29.26■■■□□ 2.27
DEPDC5-203ENST00000400242 ZCCHC6Q5VYS8 1495 aaKnown RBP28.79■■■□□ 2.2
DEPDC5-203ENST00000400242 SHROOM4Q9ULL8 1493 aa28.73■■■□□ 2.19
DEPDC5-203ENST00000400242 DCAF8L2P0C7V8 631 aa28.32■■■□□ 2.12
DEPDC5-203ENST00000400242 DCAF1Q9Y4B6 1507 aa28■■■□□ 2.07
DEPDC5-203ENST00000400242 SUPT5HO00267 1087 aaKnown RBP27.94■■■□□ 2.06
DEPDC5-203ENST00000400242 ABCC9O60706 1549 aa27.41■■□□□ 1.98
DEPDC5-203ENST00000400242 MYO15BQ96JP2 1530 aa27.35■■□□□ 1.97
DEPDC5-203ENST00000400242 SCRIBQ14160 1630 aa27.33■■□□□ 1.97
DEPDC5-203ENST00000400242 NACADO15069 1562 aa27.11■■□□□ 1.93
DEPDC5-203ENST00000400242 CHIC1Q5VXU3 224 aa26.99■■□□□ 1.91
DEPDC5-203ENST00000400242 RSF1Q96T23 1441 aaPredicted RBP26.82■■□□□ 1.88
DEPDC5-203ENST00000400242 RB1CC1Q8TDY2 1594 aa26.76■■□□□ 1.87
DEPDC5-203ENST00000400242 CECR2Q9BXF3 1484 aa26.65■■□□□ 1.86
DEPDC5-203ENST00000400242 MROH2BQ7Z745 1585 aa26.52■■□□□ 1.84
DEPDC5-203ENST00000400242 UNC13AQ9UPW8 1703 aa26.45■■□□□ 1.83
DEPDC5-203ENST00000400242 WIZO95785 1651 aa26.38■■□□□ 1.81
DEPDC5-203ENST00000400242 BAZ1AQ9NRL2 1556 aaPredicted RBP26.23■■□□□ 1.79
DEPDC5-203ENST00000400242 LOC105371045A0A1W2PR82 267 aa26.17■■□□□ 1.78
DEPDC5-203ENST00000400242 SMARCA4P51532 1647 aa26.1■■□□□ 1.77
DEPDC5-203ENST00000400242 PABPN1Q86U42 306 aaKnown RBP eCLIP26.1■■□□□ 1.77
DEPDC5-203ENST00000400242 BICRAQ9NZM4 1560 aa26.09■■□□□ 1.77
DEPDC5-203ENST00000400242 TRIM41Q8WV44 630 aa26.06■■□□□ 1.76
DEPDC5-203ENST00000400242 TOP2AP11388 1531 aaKnown RBP25.93■■□□□ 1.74
DEPDC5-203ENST00000400242 EIF4G1Q04637 1599 aaKnown RBP25.86■■□□□ 1.73
DEPDC5-203ENST00000400242 FAM9AQ8IZU1 332 aaPredicted RBP25.83■■□□□ 1.73
DEPDC5-203ENST00000400242 CCDC88BA6NC98 1476 aa25.8■■□□□ 1.72
DEPDC5-203ENST00000400242 SMARCA2P51531 1590 aa25.8■■□□□ 1.72
DEPDC5-203ENST00000400242 PCGF6Q9BYE7 350 aa25.68■■□□□ 1.7
DEPDC5-203ENST00000400242 EHMT2Q96KQ7 1210 aa25.63■■□□□ 1.69
DEPDC5-203ENST00000400242 PEG3Q9GZU2 1588 aa25.62■■□□□ 1.69
DEPDC5-203ENST00000400242 ABCC8Q09428 1581 aa25.62■■□□□ 1.69
DEPDC5-203ENST00000400242 ATAD2BQ9ULI0 1458 aa25.5■■□□□ 1.67
DEPDC5-203ENST00000400242 BAZ1BQ9UIG0 1483 aaKnown RBP25.4■■□□□ 1.66
DEPDC5-203ENST00000400242 HRCP23327 699 aa25.37■■□□□ 1.65
DEPDC5-203ENST00000400242 TRIM26Q12899 539 aaPredicted RBP25.28■■□□□ 1.64
DEPDC5-203ENST00000400242 SOGA1O94964 1423 aa25.27■■□□□ 1.64
DEPDC5-203ENST00000400242 WRNQ14191 1432 aaPredicted RBP eCLIP25.19■■□□□ 1.62
DEPDC5-203ENST00000400242 RUSC2Q8N2Y8 1516 aa25.19■■□□□ 1.62
DEPDC5-203ENST00000400242 SYNJ1O43426 1573 aa25.15■■□□□ 1.62
DEPDC5-203ENST00000400242 NCAPD3P42695 1498 aa25.07■■□□□ 1.6
DEPDC5-203ENST00000400242 HMGXB3Q12766 1538 aa25.06■■□□□ 1.6
DEPDC5-203ENST00000400242 CSRNP3Q8WYN3 585 aa25.03■■□□□ 1.6
DEPDC5-203ENST00000400242 PPARGC1BQ86YN6 1023 aaKnown RBP25.01■■□□□ 1.59
DEPDC5-203ENST00000400242 EEA1Q15075 1411 aa25.01■■□□□ 1.59
DEPDC5-203ENST00000400242 CEP162Q5TB80 1403 aa24.92■■□□□ 1.58
DEPDC5-203ENST00000400242 TNIKQ9UKE5 1360 aa24.9■■□□□ 1.58
DEPDC5-203ENST00000400242 UBTFP17480 764 aaKnown RBP24.87■■□□□ 1.57
DEPDC5-203ENST00000400242 TOP2BQ02880 1626 aa24.86■■□□□ 1.57
DEPDC5-203ENST00000400242 GOLGA3Q08378 1498 aa24.85■■□□□ 1.57
DEPDC5-203ENST00000400242 BIVM-ERCC5R4GMW8 1640 aa24.8■■□□□ 1.56
DEPDC5-203ENST00000400242 CFTRP13569 1480 aa24.76■■□□□ 1.55
DEPDC5-203ENST00000400242 KIF21BO75037 1637 aa24.76■■□□□ 1.55
DEPDC5-203ENST00000400242 CEP164Q9UPV0 1460 aa24.75■■□□□ 1.55
DEPDC5-203ENST00000400242 CUX1P39880 1505 aa24.72■■□□□ 1.55
DEPDC5-203ENST00000400242 CC2D2AQ9P2K1 1620 aa24.72■■□□□ 1.55
DEPDC5-203ENST00000400242 TTBK1Q5TCY1 1321 aaPredicted RBP24.69■■□□□ 1.54
DEPDC5-203ENST00000400242 RAPGEF2Q9Y4G8 1499 aa24.67■■□□□ 1.54
DEPDC5-203ENST00000400242 PRDM2Q13029 1718 aa24.63■■□□□ 1.53
DEPDC5-203ENST00000400242 CADPSQ9ULU8 1353 aa24.55■■□□□ 1.52
DEPDC5-203ENST00000400242 CLIP1P30622 1438 aa24.54■■□□□ 1.52
DEPDC5-203ENST00000400242 RANGAP1P46060 587 aaPredicted RBP24.51■■□□□ 1.51
DEPDC5-203ENST00000400242 ZEB1P37275 1124 aaPredicted RBP24.47■■□□□ 1.51
DEPDC5-203ENST00000400242 PRXQ9BXM0 1461 aa24.47■■□□□ 1.51
DEPDC5-203ENST00000400242 KIF27Q86VH2 1401 aa24.44■■□□□ 1.5
DEPDC5-203ENST00000400242 ERICH3Q5RHP9 1530 aa24.43■■□□□ 1.5
DEPDC5-203ENST00000400242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.39■■□□□ 1.5
DEPDC5-203ENST00000400242 VPS8Q8N3P4 1428 aa24.38■■□□□ 1.49
DEPDC5-203ENST00000400242 FGD5Q6ZNL6 1462 aa24.33■■□□□ 1.49
DEPDC5-203ENST00000400242 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.48
DEPDC5-203ENST00000400242 NESP48681 1621 aa24.33■■□□□ 1.48
DEPDC5-203ENST00000400242 CUX2O14529 1486 aa24.32■■□□□ 1.48
DEPDC5-203ENST00000400242 CCER1Q8TC90 406 aaPredicted RBP24.26■■□□□ 1.47
DEPDC5-203ENST00000400242 ARAP1Q96P48 1450 aa24.24■■□□□ 1.47
DEPDC5-203ENST00000400242 IGF1RP08069 1367 aa24.23■■□□□ 1.47
DEPDC5-203ENST00000400242 DNAJC5BQ9UF47 199 aa24.21■■□□□ 1.47
DEPDC5-203ENST00000400242 APLP2Q06481 763 aa24.18■■□□□ 1.46
DEPDC5-203ENST00000400242 DNMBPQ6XZF7 1577 aa24.16■■□□□ 1.46
DEPDC5-203ENST00000400242 RAD54L2Q9Y4B4 1467 aa24.14■■□□□ 1.45
DEPDC5-203ENST00000400242 TOPBP1Q92547 1522 aa24.14■■□□□ 1.45
DEPDC5-203ENST00000400242 CARMIL1Q5VZK9 1371 aa24.1■■□□□ 1.45
DEPDC5-203ENST00000400242 POLA1P09884 1462 aaPredicted RBP24.1■■□□□ 1.45
DEPDC5-203ENST00000400242 ARHGAP35Q9NRY4 1499 aa24.1■■□□□ 1.45
DEPDC5-203ENST00000400242 LAMC3Q9Y6N6 1575 aa24.09■■□□□ 1.45
DEPDC5-203ENST00000400242 HNRNPUL2Q1KMD3 747 aaKnown RBP24.08■■□□□ 1.44
DEPDC5-203ENST00000400242 KANK4Q5T7N3 995 aaPredicted RBP24.03■■□□□ 1.44
DEPDC5-203ENST00000400242 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
DEPDC5-203ENST00000400242 ABCA10Q8WWZ4 1543 aa24.03■■□□□ 1.44
DEPDC5-203ENST00000400242 KIF21AQ7Z4S6 1674 aa23.94■■□□□ 1.42
DEPDC5-203ENST00000400242 WDR97A6NE52 1622 aa23.91■■□□□ 1.42
DEPDC5-203ENST00000400242 PDS5BQ9NTI5 1447 aa23.9■■□□□ 1.42
DEPDC5-203ENST00000400242 TDRD9Q8NDG6 1382 aaKnown RBP23.84■■□□□ 1.41
DEPDC5-203ENST00000400242 CUL7Q14999 1698 aa23.84■■□□□ 1.41
DEPDC5-203ENST00000400242 P3H3Q8IVL6 736 aa23.84■■□□□ 1.41
DEPDC5-203ENST00000400242 ABCA5Q8WWZ7 1642 aa23.8■■□□□ 1.4
DEPDC5-203ENST00000400242 TIAM1Q13009 1591 aa23.77■■□□□ 1.4
DEPDC5-203ENST00000400242 CTTNBP2Q8WZ74 1663 aa23.77■■□□□ 1.4
DEPDC5-203ENST00000400242 RRBP1Q9P2E9 1410 aaKnown RBP23.76■■□□□ 1.39
DEPDC5-203ENST00000400242 GAPVD1Q14C86 1478 aa23.75■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 152.5 ms