Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC26.71■■□□□ 1.87
CLIC4Q9Y696 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.7■■□□□ 1.86
CLIC4Q9Y696 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CLIC4Q9Y696 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CLIC4Q9Y696 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
CLIC4Q9Y696 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
CLIC4Q9Y696 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
CLIC4Q9Y696 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC26.69■■□□□ 1.86
CLIC4Q9Y696 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.69■■□□□ 1.86
CLIC4Q9Y696 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CLIC4Q9Y696 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC26.69■■□□□ 1.86
CLIC4Q9Y696 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
CLIC4Q9Y696 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CLIC4Q9Y696 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC26.68■■□□□ 1.86
CLIC4Q9Y696 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
CLIC4Q9Y696 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
CLIC4Q9Y696 AC087393.1-201ENST00000582896 145 ntBASIC26.68■■□□□ 1.86
CLIC4Q9Y696 MIR6765-201ENST00000614092 87 ntBASIC26.68■■□□□ 1.86
CLIC4Q9Y696 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.68■■□□□ 1.86
CLIC4Q9Y696 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.68■■□□□ 1.86
CLIC4Q9Y696 AC129492.7-201ENST00000622992 756 ntBASIC26.68■■□□□ 1.86
CLIC4Q9Y696 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CLIC4Q9Y696 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 KRT18P60-201ENST00000312876 1297 ntBASIC26.67■■□□□ 1.86
CLIC4Q9Y696 IDNK-203ENST00000405990 629 ntTSL 2 BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.67■■□□□ 1.86
CLIC4Q9Y696 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
CLIC4Q9Y696 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC26.66■■□□□ 1.86
CLIC4Q9Y696 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.66■■□□□ 1.86
CLIC4Q9Y696 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
CLIC4Q9Y696 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLIC4Q9Y696 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC26.65■■□□□ 1.86
CLIC4Q9Y696 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC26.65■■□□□ 1.86
CLIC4Q9Y696 ABCB10P4-201ENST00000566803 2184 ntBASIC26.65■■□□□ 1.86
CLIC4Q9Y696 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLIC4Q9Y696 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLIC4Q9Y696 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CLIC4Q9Y696 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC26.64■■□□□ 1.86
CLIC4Q9Y696 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
CLIC4Q9Y696 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CLIC4Q9Y696 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CLIC4Q9Y696 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CLIC4Q9Y696 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
CLIC4Q9Y696 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC26.62■■□□□ 1.85
CLIC4Q9Y696 SHD-204ENST00000599689 1729 ntTSL 5 BASIC26.62■■□□□ 1.85
CLIC4Q9Y696 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLIC4Q9Y696 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLIC4Q9Y696 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CLIC4Q9Y696 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLIC4Q9Y696 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.61■■□□□ 1.85
CLIC4Q9Y696 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.61■■□□□ 1.85
CLIC4Q9Y696 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CLIC4Q9Y696 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC26.61■■□□□ 1.85
CLIC4Q9Y696 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLIC4Q9Y696 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CLIC4Q9Y696 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 CASK-201ENST00000378154 2494 ntTSL 5 BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CLIC4Q9Y696 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CLIC4Q9Y696 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLIC4Q9Y696 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CLIC4Q9Y696 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CLIC4Q9Y696 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC26.58■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 12.9 ms