Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
SPG11Q96JI7 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC19.98■□□□□ 0.79
SPG11Q96JI7 ESRRAP2-201ENST00000418437 1549 ntBASIC19.98■□□□□ 0.79
SPG11Q96JI7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SPG11Q96JI7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SPG11Q96JI7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SPG11Q96JI7 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC19.97■□□□□ 0.79
SPG11Q96JI7 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.97■□□□□ 0.79
SPG11Q96JI7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SPG11Q96JI7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPG11Q96JI7 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.96■□□□□ 0.79
SPG11Q96JI7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.96■□□□□ 0.79
SPG11Q96JI7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPG11Q96JI7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPG11Q96JI7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPG11Q96JI7 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SPG11Q96JI7 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC19.96■□□□□ 0.79
SPG11Q96JI7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.96■□□□□ 0.79
SPG11Q96JI7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.96■□□□□ 0.79
SPG11Q96JI7 MIR6722-201ENST00000617286 78 ntBASIC19.96■□□□□ 0.79
SPG11Q96JI7 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
SPG11Q96JI7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
SPG11Q96JI7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC19.95■□□□□ 0.78
SPG11Q96JI7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SPG11Q96JI7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.95■□□□□ 0.78
SPG11Q96JI7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.95■□□□□ 0.78
SPG11Q96JI7 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPG11Q96JI7 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.95■□□□□ 0.78
SPG11Q96JI7 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
SPG11Q96JI7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPG11Q96JI7 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC19.95■□□□□ 0.78
SPG11Q96JI7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SPG11Q96JI7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPG11Q96JI7 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
SPG11Q96JI7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.94■□□□□ 0.78
SPG11Q96JI7 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.94■□□□□ 0.78
SPG11Q96JI7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPG11Q96JI7 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
SPG11Q96JI7 RARRES2P11-201ENST00000635158 484 ntBASIC19.94■□□□□ 0.78
SPG11Q96JI7 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
SPG11Q96JI7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
SPG11Q96JI7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPG11Q96JI7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPG11Q96JI7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
SPG11Q96JI7 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
SPG11Q96JI7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC19.93■□□□□ 0.78
SPG11Q96JI7 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
SPG11Q96JI7 CA15P2-201ENST00000611168 834 ntBASIC19.93■□□□□ 0.78
SPG11Q96JI7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPG11Q96JI7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC19.92■□□□□ 0.78
SPG11Q96JI7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.92■□□□□ 0.78
SPG11Q96JI7 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPG11Q96JI7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPG11Q96JI7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPG11Q96JI7 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.92■□□□□ 0.78
SPG11Q96JI7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPG11Q96JI7 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPG11Q96JI7 SERBP1P1-201ENST00000396021 1160 ntBASIC19.92■□□□□ 0.78
SPG11Q96JI7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.92■□□□□ 0.78
SPG11Q96JI7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPG11Q96JI7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
SPG11Q96JI7 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
SPG11Q96JI7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
SPG11Q96JI7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.91■□□□□ 0.78
SPG11Q96JI7 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
SPG11Q96JI7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.91■□□□□ 0.78
SPG11Q96JI7 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
SPG11Q96JI7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC19.91■□□□□ 0.78
SPG11Q96JI7 DUX4L19-201ENST00000557448 1267 ntBASIC19.91■□□□□ 0.78
SPG11Q96JI7 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.91■□□□□ 0.78
SPG11Q96JI7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC19.9■□□□□ 0.78
SPG11Q96JI7 IRS3P-201ENST00000223076 1006 ntBASIC19.9■□□□□ 0.78
SPG11Q96JI7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC19.9■□□□□ 0.78
SPG11Q96JI7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.9■□□□□ 0.78
SPG11Q96JI7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPG11Q96JI7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.9■□□□□ 0.78
SPG11Q96JI7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPG11Q96JI7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPG11Q96JI7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.9■□□□□ 0.78
SPG11Q96JI7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
SPG11Q96JI7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.9■□□□□ 0.78
SPG11Q96JI7 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
SPG11Q96JI7 AC005703.6-201ENST00000623265 1329 ntBASIC19.89■□□□□ 0.78
SPG11Q96JI7 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.89■□□□□ 0.77
SPG11Q96JI7 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPG11Q96JI7 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.89■□□□□ 0.77
SPG11Q96JI7 AC022517.1-201ENST00000592429 346 ntBASIC19.89■□□□□ 0.77
SPG11Q96JI7 AC142472.1-201ENST00000612013 1741 ntBASIC19.89■□□□□ 0.77
SPG11Q96JI7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC19.89■□□□□ 0.77
SPG11Q96JI7 AP004609.3-201ENST00000610705 1884 ntBASIC19.89■□□□□ 0.77
SPG11Q96JI7 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
SPG11Q96JI7 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
SPG11Q96JI7 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPG11Q96JI7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
SPG11Q96JI7 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC19.88■□□□□ 0.77
SPG11Q96JI7 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC19.88■□□□□ 0.77
SPG11Q96JI7 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC19.88■□□□□ 0.77
SPG11Q96JI7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
SPG11Q96JI7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC19.88■□□□□ 0.77
SPG11Q96JI7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms