Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.58■■□□□ 1.21
SGO1Q5FBB7 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.2
SGO1Q5FBB7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
SGO1Q5FBB7 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 LINC00543-201ENST00000567234 1845 ntBASIC22.57■■□□□ 1.2
SGO1Q5FBB7 RPS2P7-201ENST00000447334 885 ntBASIC22.57■■□□□ 1.2
SGO1Q5FBB7 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SGO1Q5FBB7 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SGO1Q5FBB7 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
SGO1Q5FBB7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.56■■□□□ 1.2
SGO1Q5FBB7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SGO1Q5FBB7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC22.56■■□□□ 1.2
SGO1Q5FBB7 DUX4L9-201ENST00000449051 1259 ntBASIC22.56■■□□□ 1.2
SGO1Q5FBB7 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SGO1Q5FBB7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC22.56■■□□□ 1.2
SGO1Q5FBB7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SGO1Q5FBB7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC22.55■■□□□ 1.2
SGO1Q5FBB7 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SGO1Q5FBB7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SGO1Q5FBB7 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
SGO1Q5FBB7 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.55■■□□□ 1.2
SGO1Q5FBB7 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.55■■□□□ 1.2
SGO1Q5FBB7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC22.55■■□□□ 1.2
SGO1Q5FBB7 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SGO1Q5FBB7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SGO1Q5FBB7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.54■■□□□ 1.2
SGO1Q5FBB7 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC22.54■■□□□ 1.2
SGO1Q5FBB7 MIR6765-201ENST00000614092 87 ntBASIC22.54■■□□□ 1.2
SGO1Q5FBB7 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SGO1Q5FBB7 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 HLA-L-211ENST00000482052 1765 ntBASIC22.53■■□□□ 1.2
SGO1Q5FBB7 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SGO1Q5FBB7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SGO1Q5FBB7 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SGO1Q5FBB7 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
SGO1Q5FBB7 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SGO1Q5FBB7 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SGO1Q5FBB7 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.52■■□□□ 1.2
SGO1Q5FBB7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
SGO1Q5FBB7 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.19
SGO1Q5FBB7 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SGO1Q5FBB7 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SGO1Q5FBB7 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SGO1Q5FBB7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.51■■□□□ 1.19
SGO1Q5FBB7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SGO1Q5FBB7 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SGO1Q5FBB7 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SGO1Q5FBB7 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC22.51■■□□□ 1.19
SGO1Q5FBB7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SGO1Q5FBB7 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SGO1Q5FBB7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SGO1Q5FBB7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SGO1Q5FBB7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
SGO1Q5FBB7 KRT18P60-201ENST00000312876 1297 ntBASIC22.5■■□□□ 1.19
SGO1Q5FBB7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC22.5■■□□□ 1.19
SGO1Q5FBB7 AC129492.7-201ENST00000622992 756 ntBASIC22.5■■□□□ 1.19
SGO1Q5FBB7 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SGO1Q5FBB7 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC22.5■■□□□ 1.19
SGO1Q5FBB7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.5■■□□□ 1.19
SGO1Q5FBB7 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
SGO1Q5FBB7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
SGO1Q5FBB7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SGO1Q5FBB7 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.49■■□□□ 1.19
SGO1Q5FBB7 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SGO1Q5FBB7 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SGO1Q5FBB7 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
SGO1Q5FBB7 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SGO1Q5FBB7 AC141586.4-201ENST00000624558 1573 ntBASIC22.48■■□□□ 1.19
SGO1Q5FBB7 AC087393.1-201ENST00000582896 145 ntBASIC22.48■■□□□ 1.19
SGO1Q5FBB7 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.48■■□□□ 1.19
SGO1Q5FBB7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SGO1Q5FBB7 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 AC004812.2-201ENST00000611079 2094 ntBASIC22.47■■□□□ 1.19
SGO1Q5FBB7 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 IDNK-203ENST00000405990 629 ntTSL 2 BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.47■■□□□ 1.19
SGO1Q5FBB7 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SGO1Q5FBB7 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC22.46■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms