RNA–Protein interactions for RNA: ENST00000503000.1

ZFYVE28-202, Transcript of zinc finger FYVE-type containing 28, humanhuman

TSL 1 (best) BASIC

Gene ZFYVE28, Length 1,874 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28-202ENST00000503000 NISCHQ9Y2I1 1504 aa50.79■■■■■ 5.72
ZFYVE28-202ENST00000503000 CCDC180Q9P1Z9 1646 aa43.96■■■■■ 4.63
ZFYVE28-202ENST00000503000 ZCCHC6Q5VYS8 1495 aaKnown RBP42.79■■■■■ 4.44
ZFYVE28-202ENST00000503000 DCAF1Q9Y4B6 1507 aa42.02■■■■■ 4.32
ZFYVE28-202ENST00000503000 SHROOM4Q9ULL8 1493 aa41.89■■■■■ 4.3
ZFYVE28-202ENST00000503000 DCAF8L2P0C7V8 631 aa41.77■■■■■ 4.28
ZFYVE28-202ENST00000503000 MYO15BQ96JP2 1530 aa41.27■■■■■ 4.2
ZFYVE28-202ENST00000503000 ABCC9O60706 1549 aa40.97■■■■■ 4.15
ZFYVE28-202ENST00000503000 NACADO15069 1562 aa40.81■■■■■ 4.12
ZFYVE28-202ENST00000503000 SUPT5HO00267 1087 aaKnown RBP40.68■■■■■ 4.1
ZFYVE28-202ENST00000503000 SCRIBQ14160 1630 aa40.51■■■■■ 4.08
ZFYVE28-202ENST00000503000 RB1CC1Q8TDY2 1594 aa40.29■■■■■ 4.04
ZFYVE28-202ENST00000503000 RSF1Q96T23 1441 aaPredicted RBP39.67■■■■□ 3.94
ZFYVE28-202ENST00000503000 UNC13AQ9UPW8 1703 aa39.48■■■■□ 3.91
ZFYVE28-202ENST00000503000 CECR2Q9BXF3 1484 aa39.4■■■■□ 3.9
ZFYVE28-202ENST00000503000 CHIC1Q5VXU3 224 aa39.31■■■■□ 3.88
ZFYVE28-202ENST00000503000 MROH2BQ7Z745 1585 aa39.25■■■■□ 3.87
ZFYVE28-202ENST00000503000 BAZ1AQ9NRL2 1556 aaPredicted RBP39.17■■■■□ 3.86
ZFYVE28-202ENST00000503000 BICRAQ9NZM4 1560 aa39.05■■■■□ 3.84
ZFYVE28-202ENST00000503000 WIZO95785 1651 aa38.97■■■■□ 3.83
ZFYVE28-202ENST00000503000 SMARCA4P51532 1647 aa38.9■■■■□ 3.82
ZFYVE28-202ENST00000503000 PABPN1Q86U42 306 aaKnown RBP eCLIP38.79■■■■□ 3.8
ZFYVE28-202ENST00000503000 TOP2AP11388 1531 aaKnown RBP38.59■■■■□ 3.77
ZFYVE28-202ENST00000503000 PEG3Q9GZU2 1588 aa38.4■■■■□ 3.74
ZFYVE28-202ENST00000503000 SMARCA2P51531 1590 aa38.25■■■■□ 3.71
ZFYVE28-202ENST00000503000 TRIM41Q8WV44 630 aa38.23■■■■□ 3.71
ZFYVE28-202ENST00000503000 CCDC88BA6NC98 1476 aa38.22■■■■□ 3.71
ZFYVE28-202ENST00000503000 EIF4G1Q04637 1599 aaKnown RBP38.18■■■■□ 3.7
ZFYVE28-202ENST00000503000 ATAD2BQ9ULI0 1458 aa38.1■■■■□ 3.69
ZFYVE28-202ENST00000503000 BAZ1BQ9UIG0 1483 aaKnown RBP37.92■■■■□ 3.66
ZFYVE28-202ENST00000503000 LOC105371045A0A1W2PR82 267 aa37.82■■■■□ 3.65
ZFYVE28-202ENST00000503000 NCAPD3P42695 1498 aa37.67■■■■□ 3.62
ZFYVE28-202ENST00000503000 HMGXB3Q12766 1538 aa37.66■■■■□ 3.62
ZFYVE28-202ENST00000503000 ABCC8Q09428 1581 aa37.6■■■■□ 3.61
ZFYVE28-202ENST00000503000 FAM9AQ8IZU1 332 aaPredicted RBP37.52■■■■□ 3.6
ZFYVE28-202ENST00000503000 WRNQ14191 1432 aaPredicted RBP eCLIP37.33■■■■□ 3.57
ZFYVE28-202ENST00000503000 EEA1Q15075 1411 aa37.19■■■■□ 3.54
ZFYVE28-202ENST00000503000 SYNJ1O43426 1573 aa37.11■■■■□ 3.53
ZFYVE28-202ENST00000503000 CC2D2AQ9P2K1 1620 aa37.1■■■■□ 3.53
ZFYVE28-202ENST00000503000 SOGA1O94964 1423 aa37.06■■■■□ 3.52
ZFYVE28-202ENST00000503000 CFTRP13569 1480 aa37.02■■■■□ 3.52
ZFYVE28-202ENST00000503000 EHMT2Q96KQ7 1210 aa36.94■■■■□ 3.5
ZFYVE28-202ENST00000503000 TOP2BQ02880 1626 aa36.94■■■■□ 3.5
ZFYVE28-202ENST00000503000 CSRNP3Q8WYN3 585 aa36.92■■■■□ 3.5
ZFYVE28-202ENST00000503000 BIVM-ERCC5R4GMW8 1640 aa36.88■■■■□ 3.49
ZFYVE28-202ENST00000503000 RUSC2Q8N2Y8 1516 aa36.87■■■■□ 3.49
ZFYVE28-202ENST00000503000 PRDM2Q13029 1718 aa36.85■■■■□ 3.49
ZFYVE28-202ENST00000503000 PCGF6Q9BYE7 350 aa36.82■■■■□ 3.49
ZFYVE28-202ENST00000503000 CADPSQ9ULU8 1353 aa36.76■■■■□ 3.48
ZFYVE28-202ENST00000503000 TNIKQ9UKE5 1360 aa36.71■■■■□ 3.47
ZFYVE28-202ENST00000503000 TRIM26Q12899 539 aaPredicted RBP36.69■■■■□ 3.46
ZFYVE28-202ENST00000503000 GOLGA3Q08378 1498 aa36.67■■■■□ 3.46
ZFYVE28-202ENST00000503000 CUX1P39880 1505 aa36.66■■■■□ 3.46
ZFYVE28-202ENST00000503000 KIF21BO75037 1637 aa36.63■■■■□ 3.45
ZFYVE28-202ENST00000503000 CEP164Q9UPV0 1460 aa36.61■■■■□ 3.45
ZFYVE28-202ENST00000503000 CEP162Q5TB80 1403 aa36.54■■■■□ 3.44
ZFYVE28-202ENST00000503000 UBTFP17480 764 aaKnown RBP36.51■■■■□ 3.44
ZFYVE28-202ENST00000503000 FANCD2Q9BXW9 1451 aa36.34■■■■□ 3.41
ZFYVE28-202ENST00000503000 KIF27Q86VH2 1401 aa36.34■■■■□ 3.41
ZFYVE28-202ENST00000503000 HRCP23327 699 aa36.33■■■■□ 3.41
ZFYVE28-202ENST00000503000 RAPGEF2Q9Y4G8 1499 aa36.28■■■■□ 3.4
ZFYVE28-202ENST00000503000 LAMC3Q9Y6N6 1575 aa36.27■■■■□ 3.4
ZFYVE28-202ENST00000503000 ERICH3Q5RHP9 1530 aa36.27■■■■□ 3.4
ZFYVE28-202ENST00000503000 PRXQ9BXM0 1461 aa36.25■■■■□ 3.39
ZFYVE28-202ENST00000503000 NESP48681 1621 aa36.17■■■■□ 3.38
ZFYVE28-202ENST00000503000 FGD5Q6ZNL6 1462 aa36.16■■■■□ 3.38
ZFYVE28-202ENST00000503000 DNMBPQ6XZF7 1577 aa36.13■■■■□ 3.37
ZFYVE28-202ENST00000503000 CLIP1P30622 1438 aa36.11■■■■□ 3.37
ZFYVE28-202ENST00000503000 CUX2O14529 1486 aa36.07■■■■□ 3.36
ZFYVE28-202ENST00000503000 TOPBP1Q92547 1522 aa36.02■■■■□ 3.36
ZFYVE28-202ENST00000503000 PDS5BQ9NTI5 1447 aa36■■■■□ 3.35
ZFYVE28-202ENST00000503000 PPARGC1BQ86YN6 1023 aaKnown RBP35.96■■■■□ 3.35
ZFYVE28-202ENST00000503000 IGF1RP08069 1367 aa35.94■■■■□ 3.34
ZFYVE28-202ENST00000503000 DNAJC5BQ9UF47 199 aa35.92■■■■□ 3.34
ZFYVE28-202ENST00000503000 POLA1P09884 1462 aaPredicted RBP35.89■■■■□ 3.34
ZFYVE28-202ENST00000503000 VPS8Q8N3P4 1428 aa35.89■■■■□ 3.34
ZFYVE28-202ENST00000503000 ABCA10Q8WWZ4 1543 aa35.87■■■■□ 3.33
ZFYVE28-202ENST00000503000 URB2Q14146 1524 aaKnown RBP35.83■■■■□ 3.33
ZFYVE28-202ENST00000503000 CARMIL1Q5VZK9 1371 aa35.78■■■■□ 3.32
ZFYVE28-202ENST00000503000 RAD54L2Q9Y4B4 1467 aa35.78■■■■□ 3.32
ZFYVE28-202ENST00000503000 KIF21AQ7Z4S6 1674 aa35.74■■■■□ 3.31
ZFYVE28-202ENST00000503000 RANGAP1P46060 587 aaPredicted RBP35.67■■■■□ 3.3
ZFYVE28-202ENST00000503000 WDR97A6NE52 1622 aa35.66■■■■□ 3.3
ZFYVE28-202ENST00000503000 ARAP1Q96P48 1450 aa35.64■■■■□ 3.3
ZFYVE28-202ENST00000503000 ZEB1P37275 1124 aaPredicted RBP35.63■■■■□ 3.29
ZFYVE28-202ENST00000503000 APLP2Q06481 763 aa35.62■■■■□ 3.29
ZFYVE28-202ENST00000503000 CUL7Q14999 1698 aa35.6■■■■□ 3.29
ZFYVE28-202ENST00000503000 TTBK1Q5TCY1 1321 aaPredicted RBP35.54■■■■□ 3.28
ZFYVE28-202ENST00000503000 ARHGAP35Q9NRY4 1499 aa35.52■■■■□ 3.28
ZFYVE28-202ENST00000503000 ABCA5Q8WWZ7 1642 aa35.5■■■■□ 3.27
ZFYVE28-202ENST00000503000 MRC2Q9UBG0 1479 aa35.47■■■■□ 3.27
ZFYVE28-202ENST00000503000 GAPVD1Q14C86 1478 aa35.43■■■■□ 3.26
ZFYVE28-202ENST00000503000 TARBP1Q13395 1621 aaKnown RBP35.42■■■■□ 3.26
ZFYVE28-202ENST00000503000 TDRD9Q8NDG6 1382 aaKnown RBP35.39■■■■□ 3.26
ZFYVE28-202ENST00000503000 CTTNBP2Q8WZ74 1663 aa35.28■■■■□ 3.24
ZFYVE28-202ENST00000503000 WDR62O43379 1518 aa35.24■■■■□ 3.23
ZFYVE28-202ENST00000503000 EFCAB5A4FU69 1503 aa35.23■■■■□ 3.23
ZFYVE28-202ENST00000503000 FHAD1B1AJZ9 1412 aa35.18■■■■□ 3.22
ZFYVE28-202ENST00000503000 MAP3K1Q13233 1512 aa35.17■■■■□ 3.22
ZFYVE28-202ENST00000503000 IFT140Q96RY7 1462 aa35.16■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms