Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.838e-7■■■■□ 25.8
NCBP2P52298 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.288e-7■■■■□ 25.8
NCBP2P52298 CYC1-203ENST00000528618 831 ntTSL 517.13■□□□□ 0.339e-11■■■■□ 25.7
NCBP2P52298 LUC7L-219ENST00000494545 725 ntTSL 520.45■□□□□ 0.867e-10■■■■□ 25.7
NCBP2P52298 LUC7L-207ENST00000426094 2737 ntTSL 1 (best)18.28■□□□□ 0.527e-10■■■■□ 25.7
NCBP2P52298 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.27■□□□□ 0.367e-10■■■■□ 25.7
NCBP2P52298 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.337e-10■■■■□ 25.7
NCBP2P52298 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC16.81■□□□□ 0.287e-10■■■■□ 25.7
NCBP2P52298 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.74■□□□□ 0.277e-10■■■■□ 25.7
NCBP2P52298 LUC7L-206ENST00000419516 1211 ntTSL 512.86□□□□□ -0.357e-10■■■■□ 25.7
NCBP2P52298 LUC7L-217ENST00000490762 2643 ntTSL 1 (best)12.74□□□□□ -0.377e-10■■■■□ 25.7
NCBP2P52298 LUC7L-210ENST00000430864 695 ntTSL 511.31□□□□□ -0.67e-10■■■■□ 25.7
NCBP2P52298 LUC7L-205ENST00000418978 989 ntTSL 511.22□□□□□ -0.617e-10■■■■□ 25.7
NCBP2P52298 VEZF1-203ENST00000583932 825 ntTSL 517.93■□□□□ 0.463e-7■■■■□ 25.7
NCBP2P52298 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.133e-7■■■■□ 25.7
NCBP2P52298 MTG2-207ENST00000471352 785 ntTSL 515.09■□□□□ 0.011e-6■■■■□ 25.6
NCBP2P52298 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.241e-6■■■■□ 25.6
NCBP2P52298 MTG2-206ENST00000467101 2814 ntTSL 1 (best)13.45□□□□□ -0.261e-6■■■■□ 25.6
NCBP2P52298 MTG2-202ENST00000448254 727 ntTSL 512.82□□□□□ -0.361e-6■■■■□ 25.6
NCBP2P52298 MTG2-205ENST00000466933 667 ntTSL 311.72□□□□□ -0.531e-6■■■■□ 25.6
NCBP2P52298 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC15.19■□□□□ 0.024e-14■■■■□ 25.6
NCBP2P52298 RIC8B-205ENST00000470628 2134 ntTSL 1 (best)9.2□□□□□ -0.944e-14■■■■□ 25.6
NCBP2P52298 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.43■□□□□ 0.541e-13■■■■□ 25.6
NCBP2P52298 NDUFV3-204ENST00000460740 811 ntTSL 214.91□□□□□ -0.021e-13■■■■□ 25.6
NCBP2P52298 NDUFV3-203ENST00000460259 2029 ntTSL 213.8□□□□□ -0.21e-13■■■■□ 25.6
NCBP2P52298 TMEM136-201ENST00000314475 1434 ntTSL 2 BASIC11.73□□□□□ -0.533e-7■■■■□ 25.6
NCBP2P52298 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.553e-7■■■■□ 25.6
NCBP2P52298 TMEM136-205ENST00000531346 3776 ntTSL 29.55□□□□□ -0.883e-7■■■■□ 25.6
NCBP2P52298 NDUFV3-201ENST00000340344 4676 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.011e-13■■■■□ 25.6
NCBP2P52298 TMEM136-204ENST00000529187 3930 ntTSL 1 (best) BASIC8.02□□□□□ -1.133e-7■■■■□ 25.6
NCBP2P52298 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.276e-7■■■■□ 25.6
NCBP2P52298 STAT6-208ENST00000553499 603 ntTSL 415.36■□□□□ 0.057e-9■■■■□ 25.5
NCBP2P52298 STAT6-206ENST00000553275 670 ntTSL 314.47□□□□□ -0.097e-9■■■■□ 25.5
NCBP2P52298 STAT6-213ENST00000554825 644 ntTSL 413.41□□□□□ -0.267e-9■■■■□ 25.5
NCBP2P52298 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.437e-9■■■■□ 25.5
NCBP2P52298 STAT6-203ENST00000537215 2886 ntTSL 2 BASIC11.76□□□□□ -0.537e-9■■■■□ 25.5
NCBP2P52298 STAT6-220ENST00000556155 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.587e-9■■■■□ 25.5
NCBP2P52298 STAT6-204ENST00000538913 2879 ntTSL 2 BASIC11.39□□□□□ -0.597e-9■■■■□ 25.5
NCBP2P52298 STAT6-212ENST00000554764 2777 ntTSL 211.3□□□□□ -0.67e-9■■■■□ 25.5
NCBP2P52298 STAT6-201ENST00000300134 4034 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.037e-9■■■■□ 25.5
NCBP2P52298 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.759e-7■■■■□ 25.5
NCBP2P52298 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.329e-7■■■■□ 25.5
NCBP2P52298 ZC3H8-207ENST00000495264 319 ntTSL 26.5□□□□□ -1.379e-7■■■■□ 25.5
NCBP2P52298 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.419e-7■■■■□ 25.5
NCBP2P52298 ZC3H8-205ENST00000474234 847 ntTSL 55.8□□□□□ -1.489e-7■■■■□ 25.5
NCBP2P52298 ZC3H8-203ENST00000464305 554 ntTSL 53.35□□□□□ -1.879e-7■■■■□ 25.5
NCBP2P52298 PPP1CB-208ENST00000455580 721 ntTSL 321.9■■□□□ 1.15e-9■■■■□ 25.5
NCBP2P52298 PPP1CB-205ENST00000420282 570 ntTSL 418.99■□□□□ 0.635e-9■■■■□ 25.5
NCBP2P52298 PPP1CB-206ENST00000427786 569 ntTSL 417.87■□□□□ 0.455e-9■■■■□ 25.5
NCBP2P52298 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.165e-9■■■■□ 25.5
NCBP2P52298 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.135e-9■■■■□ 25.5
NCBP2P52298 PPP1CB-207ENST00000441461 584 ntTSL 213.74□□□□□ -0.215e-9■■■■□ 25.5
NCBP2P52298 PPP1CB-201ENST00000296122 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.45e-9■■■■□ 25.5
NCBP2P52298 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13.38□□□□□ -0.272e-6■■■■□ 25.4
NCBP2P52298 EMC3-AS1-201ENST00000326237 2882 ntTSL 29.8□□□□□ -0.842e-6■■■■□ 25.4
NCBP2P52298 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.982e-9■■■■□ 25.4
NCBP2P52298 PNKP-209ENST00000596726 637 ntTSL 519.39■□□□□ 0.692e-9■■■■□ 25.4
NCBP2P52298 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.16■□□□□ 0.662e-9■■■■□ 25.4
NCBP2P52298 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.92■□□□□ 0.622e-9■■■■□ 25.4
NCBP2P52298 PNKP-211ENST00000598020 534 ntTSL 318.87■□□□□ 0.612e-9■■■■□ 25.4
NCBP2P52298 PNKP-219ENST00000626274 752 ntTSL 218.47■□□□□ 0.552e-9■■■■□ 25.4
NCBP2P52298 PNKP-213ENST00000599543 986 ntTSL 317■□□□□ 0.312e-9■■■■□ 25.4
NCBP2P52298 PNKP-225ENST00000636214 805 ntTSL 516.35■□□□□ 0.212e-9■■■■□ 25.4
NCBP2P52298 PNKP-206ENST00000595792 645 ntTSL 216.23■□□□□ 0.192e-9■■■■□ 25.4
NCBP2P52298 PNKP-230ENST00000638016 109 ntTSL 516.2■□□□□ 0.182e-9■■■■□ 25.4
NCBP2P52298 SYN3-202ENST00000358763 3126 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.63e-6■■■■□ 25.4
NCBP2P52298 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.971e-6■■■■□ 25.4
NCBP2P52298 CENPX-203ENST00000577379 861 ntTSL 520.88■□□□□ 0.931e-6■■■■□ 25.4
NCBP2P52298 CENPX-211ENST00000585091 739 ntTSL 317.81■□□□□ 0.441e-6■■■■□ 25.4
NCBP2P52298 CENPX-209ENST00000584514 882 ntTSL 217.29■□□□□ 0.361e-6■■■■□ 25.4
NCBP2P52298 CENPX-205ENST00000580090 752 ntTSL 217.23■□□□□ 0.351e-6■■■■□ 25.4
NCBP2P52298 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.96■□□□□ 0.311e-6■■■■□ 25.4
NCBP2P52298 CENPX-207ENST00000583767 894 ntTSL 316.78■□□□□ 0.281e-6■■■■□ 25.4
NCBP2P52298 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.23■□□□□ 0.191e-6■■■■□ 25.4
NCBP2P52298 CENPX-204ENST00000579520 702 ntTSL 315.77■□□□□ 0.121e-6■■■■□ 25.4
NCBP2P52298 CENPX-210ENST00000584600 730 ntTSL 214.86□□□□□ -0.031e-6■■■■□ 25.4
NCBP2P52298 CENPX-208ENST00000584347 799 ntTSL 2 BASIC13.13□□□□□ -0.311e-6■■■■□ 25.4
NCBP2P52298 NDUFAF6-218ENST00000523378 949 ntTSL 315.59■□□□□ 0.092e-6■■■■□ 25.3
NCBP2P52298 NDUFAF6-208ENST00000519136 816 ntTSL 514.24□□□□□ -0.132e-6■■■■□ 25.3
NCBP2P52298 NDUFAF6-202ENST00000396113 2549 ntTSL 5 BASIC11.46□□□□□ -0.582e-6■■■■□ 25.3
NCBP2P52298 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.39■□□□□ 0.531e-19■■■■□ 25.3
NCBP2P52298 AC087482.1-202ENST00000558071 903 ntTSL 5 BASIC9.88□□□□□ -0.831e-19■■■■□ 25.3
NCBP2P52298 UPF2-204ENST00000460569 640 ntTSL 29.52□□□□□ -0.895e-9■■■■□ 25.3
NCBP2P52298 UPF2-202ENST00000357604 5193 ntAPPRIS P1 TSL 1 (best) BASIC8.78□□□□□ -15e-9■■■■□ 25.3
NCBP2P52298 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.285e-9■■■■□ 25.3
NCBP2P52298 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.716e-10■■■■□ 25.2
NCBP2P52298 COX5B-202ENST00000464949 613 ntTSL 518.48■□□□□ 0.556e-10■■■■□ 25.2
NCBP2P52298 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC24.98■■□□□ 1.593e-7■■■■□ 25.2
NCBP2P52298 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.293e-7■■■■□ 25.2
NCBP2P52298 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.283e-7■■■■□ 25.2
NCBP2P52298 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.2■■□□□ 1.143e-7■■■■□ 25.2
NCBP2P52298 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.073e-7■■■■□ 25.2
NCBP2P52298 L3MBTL4-208ENST00000583809 549 ntTSL 421.24■□□□□ 0.993e-7■■■■□ 25.2
NCBP2P52298 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.07■□□□□ 0.963e-7■■■■□ 25.2
NCBP2P52298 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.43■□□□□ 0.863e-7■■■■□ 25.2
NCBP2P52298 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.83e-7■■■■□ 25.2
NCBP2P52298 CCND1-206ENST00000545484 430 ntTSL 519.71■□□□□ 0.753e-7■■■■□ 25.2
NCBP2P52298 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.733e-7■■■■□ 25.2
NCBP2P52298 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.613e-7■■■■□ 25.2
NCBP2P52298 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC18.46■□□□□ 0.553e-7■■■■□ 25.2
Retrieved 100 of 18,329 protein–RNA pairs in 336.2 ms