RNA–Protein interactions for RNA: ENST00000354250.6

NDUFV3-202, Transcript of NADH:ubiquinone oxidoreductase subunit V3, humanhuman

TSL 1 (best) BASIC

Gene NDUFV3, Length 1,575 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV3-202ENST00000354250 NISCHQ9Y2I1 1504 aa48.66■■■■■ 5.38
NDUFV3-202ENST00000354250 CCDC180Q9P1Z9 1646 aa43.26■■■■■ 4.52
NDUFV3-202ENST00000354250 ABCC9O60706 1549 aa42.44■■■■■ 4.38
NDUFV3-202ENST00000354250 DCAF8L2P0C7V8 631 aa40.72■■■■■ 4.11
NDUFV3-202ENST00000354250 RB1CC1Q8TDY2 1594 aa40.71■■■■■ 4.11
NDUFV3-202ENST00000354250 NACADO15069 1562 aa40.62■■■■■ 4.09
NDUFV3-202ENST00000354250 ZCCHC6Q5VYS8 1495 aaKnown RBP40.55■■■■■ 4.08
NDUFV3-202ENST00000354250 MYO15BQ96JP2 1530 aa40.3■■■■■ 4.04
NDUFV3-202ENST00000354250 DCAF1Q9Y4B6 1507 aa40.17■■■■■ 4.02
NDUFV3-202ENST00000354250 UNC13AQ9UPW8 1703 aa39.96■■■■□ 3.99
NDUFV3-202ENST00000354250 PABPN1Q86U42 306 aaKnown RBP eCLIP39.66■■■■□ 3.94
NDUFV3-202ENST00000354250 SCRIBQ14160 1630 aa39.6■■■■□ 3.93
NDUFV3-202ENST00000354250 BICRAQ9NZM4 1560 aa39.58■■■■□ 3.93
NDUFV3-202ENST00000354250 DNAJC5BQ9UF47 199 aa38.98■■■■□ 3.83
NDUFV3-202ENST00000354250 SHROOM4Q9ULL8 1493 aa38.94■■■■□ 3.82
NDUFV3-202ENST00000354250 EIF4G1Q04637 1599 aaKnown RBP38.5■■■■□ 3.75
NDUFV3-202ENST00000354250 CC2D2AQ9P2K1 1620 aa38.38■■■■□ 3.73
NDUFV3-202ENST00000354250 CECR2Q9BXF3 1484 aa38.07■■■■□ 3.69
NDUFV3-202ENST00000354250 SMARCA4P51532 1647 aa37.81■■■■□ 3.64
NDUFV3-202ENST00000354250 BAZ1AQ9NRL2 1556 aaPredicted RBP37.69■■■■□ 3.62
NDUFV3-202ENST00000354250 MROH2BQ7Z745 1585 aa37.58■■■■□ 3.61
NDUFV3-202ENST00000354250 ATAD2BQ9ULI0 1458 aa37.56■■■■□ 3.6
NDUFV3-202ENST00000354250 NCAPD3P42695 1498 aa37.48■■■■□ 3.59
NDUFV3-202ENST00000354250 SMARCA2P51531 1590 aa37.47■■■■□ 3.59
NDUFV3-202ENST00000354250 PEG3Q9GZU2 1588 aa37.37■■■■□ 3.57
NDUFV3-202ENST00000354250 HMGXB3Q12766 1538 aa37.33■■■■□ 3.57
NDUFV3-202ENST00000354250 BAZ1BQ9UIG0 1483 aaKnown RBP37.26■■■■□ 3.55
NDUFV3-202ENST00000354250 WIZO95785 1651 aa37.22■■■■□ 3.55
NDUFV3-202ENST00000354250 RSF1Q96T23 1441 aaPredicted RBP37.08■■■■□ 3.53
NDUFV3-202ENST00000354250 NESP48681 1621 aa36.76■■■■□ 3.47
NDUFV3-202ENST00000354250 TOP2AP11388 1531 aaKnown RBP36.72■■■■□ 3.47
NDUFV3-202ENST00000354250 LAMC3Q9Y6N6 1575 aa36.53■■■■□ 3.44
NDUFV3-202ENST00000354250 ERCC6Q03468 1493 aa36.51■■■■□ 3.44
NDUFV3-202ENST00000354250 CADPSQ9ULU8 1353 aa36.41■■■■□ 3.42
NDUFV3-202ENST00000354250 KIF21AQ7Z4S6 1674 aa36.34■■■■□ 3.41
NDUFV3-202ENST00000354250 CCDC88BA6NC98 1476 aa36.31■■■■□ 3.4
NDUFV3-202ENST00000354250 PDS5BQ9NTI5 1447 aa36.24■■■■□ 3.39
NDUFV3-202ENST00000354250 SUPT5HO00267 1087 aaKnown RBP36.2■■■■□ 3.39
NDUFV3-202ENST00000354250 CFTRP13569 1480 aa36.2■■■■□ 3.39
NDUFV3-202ENST00000354250 THOC2Q8NI27 1593 aaKnown RBP36.17■■■■□ 3.38
NDUFV3-202ENST00000354250 CUX2O14529 1486 aa36.07■■■■□ 3.36
NDUFV3-202ENST00000354250 FANCD2Q9BXW9 1451 aa36.04■■■■□ 3.36
NDUFV3-202ENST00000354250 PRDM2Q13029 1718 aa36.02■■■■□ 3.36
NDUFV3-202ENST00000354250 CEP164Q9UPV0 1460 aa35.99■■■■□ 3.35
NDUFV3-202ENST00000354250 MRC2Q9UBG0 1479 aa35.93■■■■□ 3.34
NDUFV3-202ENST00000354250 WDR62O43379 1518 aa35.83■■■■□ 3.33
NDUFV3-202ENST00000354250 URB2Q14146 1524 aaKnown RBP35.73■■■■□ 3.31
NDUFV3-202ENST00000354250 TOPBP1Q92547 1522 aa35.48■■■■□ 3.27
NDUFV3-202ENST00000354250 DNMBPQ6XZF7 1577 aa35.43■■■■□ 3.26
NDUFV3-202ENST00000354250 ABCC8Q09428 1581 aa35.33■■■■□ 3.25
NDUFV3-202ENST00000354250 CUX1P39880 1505 aa35.25■■■■□ 3.23
NDUFV3-202ENST00000354250 IFT140Q96RY7 1462 aa35.2■■■■□ 3.23
NDUFV3-202ENST00000354250 POLA1P09884 1462 aaPredicted RBP35.18■■■■□ 3.22
NDUFV3-202ENST00000354250 ZNF608Q9ULD9 1512 aaPredicted RBP35.16■■■■□ 3.22
NDUFV3-202ENST00000354250 TARBP1Q13395 1621 aaKnown RBP35.12■■■■□ 3.21
NDUFV3-202ENST00000354250 FGD5Q6ZNL6 1462 aa35.11■■■■□ 3.21
NDUFV3-202ENST00000354250 RAD54L2Q9Y4B4 1467 aa35.08■■■■□ 3.21
NDUFV3-202ENST00000354250 EIF4G3O43432 1585 aaKnown RBP35.02■■■■□ 3.2
NDUFV3-202ENST00000354250 SOGA1O94964 1423 aa35■■■■□ 3.19
NDUFV3-202ENST00000354250 DNAJC5Q9H3Z4 198 aa34.98■■■■□ 3.19
NDUFV3-202ENST00000354250 SYNJ1O43426 1573 aa34.97■■■■□ 3.19
NDUFV3-202ENST00000354250 WRNQ14191 1432 aaPredicted RBP eCLIP34.95■■■■□ 3.19
NDUFV3-202ENST00000354250 AQRO60306 1485 aaKnown RBP eCLIP34.93■■■■□ 3.18
NDUFV3-202ENST00000354250 BIVM-ERCC5R4GMW8 1640 aa34.92■■■■□ 3.18
NDUFV3-202ENST00000354250 TOP2BQ02880 1626 aa34.9■■■■□ 3.18
NDUFV3-202ENST00000354250 WDR97A6NE52 1622 aa34.86■■■■□ 3.17
NDUFV3-202ENST00000354250 TDRD9Q8NDG6 1382 aaKnown RBP34.85■■■■□ 3.17
NDUFV3-202ENST00000354250 ABCA10Q8WWZ4 1543 aa34.71■■■■□ 3.15
NDUFV3-202ENST00000354250 ABCA5Q8WWZ7 1642 aa34.64■■■■□ 3.14
NDUFV3-202ENST00000354250 PBRM1Q86U86 1689 aa34.63■■■■□ 3.13
NDUFV3-202ENST00000354250 CHD1O14646 1710 aa34.62■■■■□ 3.13
NDUFV3-202ENST00000354250 SNAPC4Q5SXM2 1469 aa34.61■■■■□ 3.13
NDUFV3-202ENST00000354250 GAPVD1Q14C86 1478 aa34.6■■■■□ 3.13
NDUFV3-202ENST00000354250 GRIN2BQ13224 1484 aa34.58■■■■□ 3.13
NDUFV3-202ENST00000354250 OSCARQ8IYS5 282 aa34.55■■■■□ 3.12
NDUFV3-202ENST00000354250 FBLN2P98095 1184 aa34.49■■■■□ 3.11
NDUFV3-202ENST00000354250 MAGI1Q96QZ7 1491 aaPredicted RBP34.47■■■■□ 3.11
NDUFV3-202ENST00000354250 SYNJ2O15056 1496 aa34.36■■■■□ 3.09
NDUFV3-202ENST00000354250 CHMP7Q8WUX9 453 aaPredicted RBP34.32■■■■□ 3.09
NDUFV3-202ENST00000354250 ADAMTS12P58397 1594 aa34.32■■■■□ 3.08
NDUFV3-202ENST00000354250 ERICH3Q5RHP9 1530 aa34.28■■■■□ 3.08
NDUFV3-202ENST00000354250 KIF27Q86VH2 1401 aa34.17■■■■□ 3.06
NDUFV3-202ENST00000354250 FHAD1B1AJZ9 1412 aa34.17■■■■□ 3.06
NDUFV3-202ENST00000354250 CLASP1Q7Z460 1538 aa34.17■■■■□ 3.06
NDUFV3-202ENST00000354250 GRIN2AQ12879 1464 aa34.16■■■■□ 3.06
NDUFV3-202ENST00000354250 RIMBP3CA6NJZ7 1639 aa34.15■■■■□ 3.06
NDUFV3-202ENST00000354250 RIMBP3BA6NNM3 1639 aa34.15■■■■□ 3.06
NDUFV3-202ENST00000354250 RIMBP3Q9UFD9 1639 aa34.15■■■■□ 3.06
NDUFV3-202ENST00000354250 ARHGEF11O15085 1522 aa34.1■■■■□ 3.05
NDUFV3-202ENST00000354250 TRIM41Q8WV44 630 aa34.09■■■■□ 3.05
NDUFV3-202ENST00000354250 IGF1RP08069 1367 aa34.07■■■■□ 3.04
NDUFV3-202ENST00000354250 CEP170Q5SW79 1584 aa34.06■■■■□ 3.04
NDUFV3-202ENST00000354250 RUSC2Q8N2Y8 1516 aa34.04■■■■□ 3.04
NDUFV3-202ENST00000354250 CUL7Q14999 1698 aa34■■■■□ 3.03
NDUFV3-202ENST00000354250 NUP160Q12769 1436 aa33.99■■■■□ 3.03
NDUFV3-202ENST00000354250 CARMIL1Q5VZK9 1371 aa33.86■■■■□ 3.01
NDUFV3-202ENST00000354250 ARAP1Q96P48 1450 aa33.85■■■■□ 3.01
NDUFV3-202ENST00000354250 ERCC6L2Q5T890 1561 aa33.8■■■■□ 3
NDUFV3-202ENST00000354250 SHROOM2Q13796 1616 aa33.77■■■■□ 3
NDUFV3-202ENST00000354250 CYB5RLQ6IPT4 315 aa33.77■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms