RNA–Protein interactions for RNA: ENST00000495264.1

ZC3H8-207, Transcript of zinc finger CCCH-type containing 8, humanhuman

TSL 2

Gene ZC3H8, Length 319 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8-207ENST00000495264 AEBP2Q6ZN18 517 aaPredicted RBP24.79■■□□□ 1.56
ZC3H8-207ENST00000495264 CHIC1Q5VXU3 224 aa23.86■■□□□ 1.41
ZC3H8-207ENST00000495264 PHF23Q9BUL5 403 aaPredicted RBP21.12■□□□□ 0.97
ZC3H8-207ENST00000495264 SENP3Q9H4L4 574 aaPredicted RBP20.81■□□□□ 0.92
ZC3H8-207ENST00000495264 FOXD1Q16676 465 aa19.52■□□□□ 0.72
ZC3H8-207ENST00000495264 PLPPR3Q6T4P5 718 aa19.19■□□□□ 0.66
ZC3H8-207ENST00000495264 PPP6R1Q9UPN7 881 aa18.74■□□□□ 0.59
ZC3H8-207ENST00000495264 ADRA2BP18089 450 aa18.67■□□□□ 0.58
ZC3H8-207ENST00000495264 PIAS4Q8N2W9 510 aaPredicted RBP18.28■□□□□ 0.52
ZC3H8-207ENST00000495264 NISCHQ9Y2I1 1504 aa18.26■□□□□ 0.51
ZC3H8-207ENST00000495264 MSH5O43196 834 aa17.85■□□□□ 0.45
ZC3H8-207ENST00000495264 MAPK8IP2Q13387 824 aaPredicted RBP17.05■□□□□ 0.32
ZC3H8-207ENST00000495264 PPP4R3CPQ6ZMV5 832 aa17■□□□□ 0.31
ZC3H8-207ENST00000495264 POTEDQ86YR6 584 aa16.79■□□□□ 0.28
ZC3H8-207ENST00000495264 SCAF1Q9H7N4 1312 aaKnown RBP16.75■□□□□ 0.27
ZC3H8-207ENST00000495264 DMRT2Q9Y5R5 561 aa16.65■□□□□ 0.26
ZC3H8-207ENST00000495264 ABCC9O60706 1549 aa16.63■□□□□ 0.25
ZC3H8-207ENST00000495264 KCNA4P22459 653 aa16.47■□□□□ 0.23
ZC3H8-207ENST00000495264 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
ZC3H8-207ENST00000495264 NCBP3Q53F19 620 aaKnown RBP16.31■□□□□ 0.2
ZC3H8-207ENST00000495264 NPM3O75607 178 aaKnown RBP16.29■□□□□ 0.2
ZC3H8-207ENST00000495264 CCDC180Q9P1Z9 1646 aa16.27■□□□□ 0.19
ZC3H8-207ENST00000495264 HOXD11P31277 338 aaPredicted RBP16.22■□□□□ 0.19
ZC3H8-207ENST00000495264 RNF216Q9NWF9 866 aaPredicted RBP16.19■□□□□ 0.18
ZC3H8-207ENST00000495264 DCAF8L1A6NGE4 600 aa15.97■□□□□ 0.15
ZC3H8-207ENST00000495264 DNAJC5BQ9UF47 199 aa15.84■□□□□ 0.13
ZC3H8-207ENST00000495264 DCAF8L2P0C7V8 631 aa15.68■□□□□ 0.1
ZC3H8-207ENST00000495264 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
ZC3H8-207ENST00000495264 PABPN1Q86U42 306 aaKnown RBP eCLIP15.58■□□□□ 0.08
ZC3H8-207ENST00000495264 SLC4A1APQ9BWU0 796 aaKnown RBP15.54■□□□□ 0.08
ZC3H8-207ENST00000495264 NACADO15069 1562 aa15.49■□□□□ 0.07
ZC3H8-207ENST00000495264 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
ZC3H8-207ENST00000495264 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.44■□□□□ 0.06
ZC3H8-207ENST00000495264 RNF39Q9H2S5 420 aa15.4■□□□□ 0.06
ZC3H8-207ENST00000495264 U3KPZ7 1027 aaPredicted RBP15.27■□□□□ 0.04
ZC3H8-207ENST00000495264 BICRAQ9NZM4 1560 aa15.24■□□□□ 0.03
ZC3H8-207ENST00000495264 ZBTB22O15209 634 aa15.23■□□□□ 0.03
ZC3H8-207ENST00000495264 MYO15BQ96JP2 1530 aa15.22■□□□□ 0.03
ZC3H8-207ENST00000495264 UNC13AQ9UPW8 1703 aa15.21■□□□□ 0.03
ZC3H8-207ENST00000495264 CACNB1Q02641 598 aaPredicted RBP15.13■□□□□ 0.01
ZC3H8-207ENST00000495264 C1QBPQ07021 282 aaKnown RBP15.1■□□□□ 0.01
ZC3H8-207ENST00000495264 ZCCHC6Q5VYS8 1495 aaKnown RBP15.08■□□□□ 0.01
ZC3H8-207ENST00000495264 FOXD4L1Q9NU39 408 aa15.07■□□□□ 0
ZC3H8-207ENST00000495264 DCAF1Q9Y4B6 1507 aa15□□□□□ -0.01
ZC3H8-207ENST00000495264 EHMT2Q96KQ7 1210 aa14.98□□□□□ -0.01
ZC3H8-207ENST00000495264 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
ZC3H8-207ENST00000495264 SCRIBQ14160 1630 aa14.96□□□□□ -0.01
ZC3H8-207ENST00000495264 SPINK5Q9NQ38 1064 aaPredicted RBP14.96□□□□□ -0.01
ZC3H8-207ENST00000495264 CC2D2AQ9P2K1 1620 aa14.92□□□□□ -0.02
ZC3H8-207ENST00000495264 MYCNP04198 464 aaPredicted RBP14.92□□□□□ -0.02
ZC3H8-207ENST00000495264 CSRNP3Q8WYN3 585 aa14.91□□□□□ -0.02
ZC3H8-207ENST00000495264 SHROOM4Q9ULL8 1493 aa14.9□□□□□ -0.02
ZC3H8-207ENST00000495264 EIF4G1Q04637 1599 aaKnown RBP14.86□□□□□ -0.03
ZC3H8-207ENST00000495264 ATF5Q9Y2D1 282 aaPredicted RBP14.79□□□□□ -0.04
ZC3H8-207ENST00000495264 CAPN15O75808 1086 aa14.78□□□□□ -0.04
ZC3H8-207ENST00000495264 SAMD1Q6SPF0 538 aaPredicted RBP14.74□□□□□ -0.05
ZC3H8-207ENST00000495264 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.72□□□□□ -0.05
ZC3H8-207ENST00000495264 HNRNPUL2Q1KMD3 747 aaKnown RBP14.72□□□□□ -0.05
ZC3H8-207ENST00000495264 TRHP20396 242 aaPredicted RBP14.71□□□□□ -0.05
ZC3H8-207ENST00000495264 DSG3P32926 999 aa14.62□□□□□ -0.07
ZC3H8-207ENST00000495264 ABCB7O75027 752 aa14.6□□□□□ -0.07
ZC3H8-207ENST00000495264 APLP2Q06481 763 aa14.56□□□□□ -0.08
ZC3H8-207ENST00000495264 DNAJC5Q9H3Z4 198 aa14.55□□□□□ -0.08
ZC3H8-207ENST00000495264 ZNF219Q9P2Y4 722 aaPredicted RBP14.53□□□□□ -0.08
ZC3H8-207ENST00000495264 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
ZC3H8-207ENST00000495264 POLA2Q14181 598 aa14.42□□□□□ -0.1
ZC3H8-207ENST00000495264 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
ZC3H8-207ENST00000495264 ATAD2BQ9ULI0 1458 aa14.34□□□□□ -0.11
ZC3H8-207ENST00000495264 ERCC6Q03468 1493 aa14.31□□□□□ -0.12
ZC3H8-207ENST00000495264 CUX2O14529 1486 aa14.26□□□□□ -0.13
ZC3H8-207ENST00000495264 NESP48681 1621 aa14.26□□□□□ -0.13
ZC3H8-207ENST00000495264 SMARCA4P51532 1647 aa14.22□□□□□ -0.13
ZC3H8-207ENST00000495264 SMARCA2P51531 1590 aa14.21□□□□□ -0.14
ZC3H8-207ENST00000495264 HMGXB3Q12766 1538 aa14.18□□□□□ -0.14
ZC3H8-207ENST00000495264 BAZ1BQ9UIG0 1483 aaKnown RBP14.17□□□□□ -0.14
ZC3H8-207ENST00000495264 BAZ1AQ9NRL2 1556 aaPredicted RBP14.13□□□□□ -0.15
ZC3H8-207ENST00000495264 MROH2BQ7Z745 1585 aa14.11□□□□□ -0.15
ZC3H8-207ENST00000495264 MKRN4PQ13434 485 aaPredicted RBP14.09□□□□□ -0.15
ZC3H8-207ENST00000495264 PEG3Q9GZU2 1588 aa14.05□□□□□ -0.16
ZC3H8-207ENST00000495264 PDS5BQ9NTI5 1447 aa14□□□□□ -0.17
ZC3H8-207ENST00000495264 THOC2Q8NI27 1593 aaKnown RBP14□□□□□ -0.17
ZC3H8-207ENST00000495264 LAMC3Q9Y6N6 1575 aa13.99□□□□□ -0.17
ZC3H8-207ENST00000495264 CADPSQ9ULU8 1353 aa13.98□□□□□ -0.17
ZC3H8-207ENST00000495264 OSCARQ8IYS5 282 aa13.96□□□□□ -0.17
ZC3H8-207ENST00000495264 ZBTB12Q9Y330 459 aaPredicted RBP13.94□□□□□ -0.18
ZC3H8-207ENST00000495264 KIF21AQ7Z4S6 1674 aa13.92□□□□□ -0.18
ZC3H8-207ENST00000495264 TRIM41Q8WV44 630 aa13.92□□□□□ -0.18
ZC3H8-207ENST00000495264 WIZO95785 1651 aa13.89□□□□□ -0.19
ZC3H8-207ENST00000495264 FBLN2P98095 1184 aa13.88□□□□□ -0.19
ZC3H8-207ENST00000495264 MRC2Q9UBG0 1479 aa13.87□□□□□ -0.19
ZC3H8-207ENST00000495264 RSF1Q96T23 1441 aaPredicted RBP13.81□□□□□ -0.2
ZC3H8-207ENST00000495264 WDR62O43379 1518 aa13.8□□□□□ -0.2
ZC3H8-207ENST00000495264 FANCD2Q9BXW9 1451 aa13.8□□□□□ -0.2
ZC3H8-207ENST00000495264 CEP164Q9UPV0 1460 aa13.78□□□□□ -0.2
ZC3H8-207ENST00000495264 CFTRP13569 1480 aa13.76□□□□□ -0.21
ZC3H8-207ENST00000495264 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
ZC3H8-207ENST00000495264 URB2Q14146 1524 aaKnown RBP13.69□□□□□ -0.22
ZC3H8-207ENST00000495264 TOP2AP11388 1531 aaKnown RBP13.67□□□□□ -0.22
ZC3H8-207ENST00000495264 SPDYE2BA6NHP3 402 aa13.64□□□□□ -0.23
ZC3H8-207ENST00000495264 SPDYE6P0CI01 402 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms