RNA–Protein interactions for RNA: ENST00000272570.9

ZC3H8-201, Transcript of zinc finger CCCH-type containing 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZC3H8, Length 1,601 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8-201ENST00000272570 NISCHQ9Y2I1 1504 aa30.28■■■□□ 2.44
ZC3H8-201ENST00000272570 ABCC9O60706 1549 aa27.84■■■□□ 2.05
ZC3H8-201ENST00000272570 CCDC180Q9P1Z9 1646 aa27.42■■□□□ 1.98
ZC3H8-201ENST00000272570 DNAJC5BQ9UF47 199 aa26.49■■□□□ 1.83
ZC3H8-201ENST00000272570 RB1CC1Q8TDY2 1594 aa26.3■■□□□ 1.8
ZC3H8-201ENST00000272570 NACADO15069 1562 aa25.99■■□□□ 1.75
ZC3H8-201ENST00000272570 PABPN1Q86U42 306 aaKnown RBP eCLIP25.82■■□□□ 1.72
ZC3H8-201ENST00000272570 UNC13AQ9UPW8 1703 aa25.78■■□□□ 1.72
ZC3H8-201ENST00000272570 DCAF8L2P0C7V8 631 aa25.74■■□□□ 1.71
ZC3H8-201ENST00000272570 BICRAQ9NZM4 1560 aa25.57■■□□□ 1.68
ZC3H8-201ENST00000272570 MYO15BQ96JP2 1530 aa25.45■■□□□ 1.67
ZC3H8-201ENST00000272570 CC2D2AQ9P2K1 1620 aa25.15■■□□□ 1.62
ZC3H8-201ENST00000272570 SHROOM4Q9ULL8 1493 aa25.13■■□□□ 1.61
ZC3H8-201ENST00000272570 CECR2Q9BXF3 1484 aa25.11■■□□□ 1.61
ZC3H8-201ENST00000272570 ZCCHC6Q5VYS8 1495 aaKnown RBP25.01■■□□□ 1.59
ZC3H8-201ENST00000272570 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
ZC3H8-201ENST00000272570 EIF4G1Q04637 1599 aaKnown RBP24.97■■□□□ 1.59
ZC3H8-201ENST00000272570 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
ZC3H8-201ENST00000272570 DNAJC5Q9H3Z4 198 aa24.64■■□□□ 1.53
ZC3H8-201ENST00000272570 CUX2O14529 1486 aa24.17■■□□□ 1.46
ZC3H8-201ENST00000272570 ERCC6Q03468 1493 aa24.07■■□□□ 1.44
ZC3H8-201ENST00000272570 NCAPD3P42695 1498 aa23.98■■□□□ 1.43
ZC3H8-201ENST00000272570 ATAD2BQ9ULI0 1458 aa23.86■■□□□ 1.41
ZC3H8-201ENST00000272570 NESP48681 1621 aa23.79■■□□□ 1.4
ZC3H8-201ENST00000272570 HMGXB3Q12766 1538 aa23.79■■□□□ 1.4
ZC3H8-201ENST00000272570 SMARCA2P51531 1590 aa23.77■■□□□ 1.4
ZC3H8-201ENST00000272570 SMARCA4P51532 1647 aa23.75■■□□□ 1.39
ZC3H8-201ENST00000272570 THOC2Q8NI27 1593 aaKnown RBP23.67■■□□□ 1.38
ZC3H8-201ENST00000272570 AEBP2Q6ZN18 517 aaPredicted RBP23.65■■□□□ 1.38
ZC3H8-201ENST00000272570 BAZ1BQ9UIG0 1483 aaKnown RBP23.62■■□□□ 1.37
ZC3H8-201ENST00000272570 BAZ1AQ9NRL2 1556 aaPredicted RBP23.55■■□□□ 1.36
ZC3H8-201ENST00000272570 LAMC3Q9Y6N6 1575 aa23.55■■□□□ 1.36
ZC3H8-201ENST00000272570 KIF21AQ7Z4S6 1674 aa23.52■■□□□ 1.36
ZC3H8-201ENST00000272570 PEG3Q9GZU2 1588 aa23.5■■□□□ 1.35
ZC3H8-201ENST00000272570 TRIM41Q8WV44 630 aa23.41■■□□□ 1.34
ZC3H8-201ENST00000272570 PDS5BQ9NTI5 1447 aa23.39■■□□□ 1.34
ZC3H8-201ENST00000272570 MROH2BQ7Z745 1585 aa23.35■■□□□ 1.33
ZC3H8-201ENST00000272570 MRC2Q9UBG0 1479 aa23.24■■□□□ 1.31
ZC3H8-201ENST00000272570 CADPSQ9ULU8 1353 aa23.22■■□□□ 1.31
ZC3H8-201ENST00000272570 WDR62O43379 1518 aa23.22■■□□□ 1.31
ZC3H8-201ENST00000272570 WIZO95785 1651 aa23.08■■□□□ 1.28
ZC3H8-201ENST00000272570 CEP164Q9UPV0 1460 aa23.07■■□□□ 1.28
ZC3H8-201ENST00000272570 FANCD2Q9BXW9 1451 aa22.99■■□□□ 1.27
ZC3H8-201ENST00000272570 OSCARQ8IYS5 282 aa22.94■■□□□ 1.26
ZC3H8-201ENST00000272570 CFTRP13569 1480 aa22.88■■□□□ 1.25
ZC3H8-201ENST00000272570 URB2Q14146 1524 aaKnown RBP22.85■■□□□ 1.25
ZC3H8-201ENST00000272570 RIMBP3CA6NJZ7 1639 aa22.78■■□□□ 1.24
ZC3H8-201ENST00000272570 RIMBP3BA6NNM3 1639 aa22.78■■□□□ 1.24
ZC3H8-201ENST00000272570 RIMBP3Q9UFD9 1639 aa22.78■■□□□ 1.24
ZC3H8-201ENST00000272570 TOP2AP11388 1531 aaKnown RBP22.72■■□□□ 1.23
ZC3H8-201ENST00000272570 PRDM2Q13029 1718 aa22.71■■□□□ 1.23
ZC3H8-201ENST00000272570 RSF1Q96T23 1441 aaPredicted RBP22.66■■□□□ 1.22
ZC3H8-201ENST00000272570 ARHGEF11O15085 1522 aa22.64■■□□□ 1.21
ZC3H8-201ENST00000272570 ZNF608Q9ULD9 1512 aaPredicted RBP22.64■■□□□ 1.21
ZC3H8-201ENST00000272570 IFT140Q96RY7 1462 aa22.6■■□□□ 1.21
ZC3H8-201ENST00000272570 EIF4G3O43432 1585 aaKnown RBP22.52■■□□□ 1.2
ZC3H8-201ENST00000272570 TOPBP1Q92547 1522 aa22.51■■□□□ 1.19
ZC3H8-201ENST00000272570 CHD1O14646 1710 aa22.47■■□□□ 1.19
ZC3H8-201ENST00000272570 CYB5RLQ6IPT4 315 aa22.46■■□□□ 1.19
ZC3H8-201ENST00000272570 CCDC88BA6NC98 1476 aa22.46■■□□□ 1.19
ZC3H8-201ENST00000272570 CHIC1Q5VXU3 224 aa22.46■■□□□ 1.19
ZC3H8-201ENST00000272570 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
ZC3H8-201ENST00000272570 DNMBPQ6XZF7 1577 aa22.4■■□□□ 1.18
ZC3H8-201ENST00000272570 ARAP1Q96P48 1450 aa22.39■■□□□ 1.17
ZC3H8-201ENST00000272570 TRHP20396 242 aaPredicted RBP22.37■■□□□ 1.17
ZC3H8-201ENST00000272570 TARBP1Q13395 1621 aaKnown RBP22.37■■□□□ 1.17
ZC3H8-201ENST00000272570 AQRO60306 1485 aaKnown RBP eCLIP22.35■■□□□ 1.17
ZC3H8-201ENST00000272570 FBLN2P98095 1184 aa22.29■■□□□ 1.16
ZC3H8-201ENST00000272570 POLA1P09884 1462 aaPredicted RBP22.25■■□□□ 1.15
ZC3H8-201ENST00000272570 RAD54L2Q9Y4B4 1467 aa22.18■■□□□ 1.14
ZC3H8-201ENST00000272570 CLASP1Q7Z460 1538 aa22.15■■□□□ 1.14
ZC3H8-201ENST00000272570 TDRD9Q8NDG6 1382 aaKnown RBP22.14■■□□□ 1.13
ZC3H8-201ENST00000272570 SNAPC4Q5SXM2 1469 aa22.14■■□□□ 1.13
ZC3H8-201ENST00000272570 SOGA1O94964 1423 aa22.11■■□□□ 1.13
ZC3H8-201ENST00000272570 SYNJ1O43426 1573 aa22.09■■□□□ 1.13
ZC3H8-201ENST00000272570 WDR97A6NE52 1622 aa22.09■■□□□ 1.13
ZC3H8-201ENST00000272570 FGD5Q6ZNL6 1462 aa22.05■■□□□ 1.12
ZC3H8-201ENST00000272570 MAGI1Q96QZ7 1491 aaPredicted RBP22.04■■□□□ 1.12
ZC3H8-201ENST00000272570 CHMP7Q8WUX9 453 aaPredicted RBP22.03■■□□□ 1.12
ZC3H8-201ENST00000272570 GRIN2BQ13224 1484 aa21.99■■□□□ 1.11
ZC3H8-201ENST00000272570 SYNJ2O15056 1496 aa21.97■■□□□ 1.11
ZC3H8-201ENST00000272570 CUX1P39880 1505 aa21.97■■□□□ 1.11
ZC3H8-201ENST00000272570 PBRM1Q86U86 1689 aa21.95■■□□□ 1.1
ZC3H8-201ENST00000272570 GAPVD1Q14C86 1478 aa21.92■■□□□ 1.1
ZC3H8-201ENST00000272570 ABCA5Q8WWZ7 1642 aa21.81■■□□□ 1.08
ZC3H8-201ENST00000272570 ERCC6L2Q5T890 1561 aa21.79■■□□□ 1.08
ZC3H8-201ENST00000272570 ABCA10Q8WWZ4 1543 aa21.76■■□□□ 1.07
ZC3H8-201ENST00000272570 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
ZC3H8-201ENST00000272570 CEP170Q5SW79 1584 aa21.7■■□□□ 1.06
ZC3H8-201ENST00000272570 ADAMTS12P58397 1594 aa21.68■■□□□ 1.06
ZC3H8-201ENST00000272570 NUP160Q12769 1436 aa21.65■■□□□ 1.06
ZC3H8-201ENST00000272570 KIF13AQ9H1H9 1805 aa21.65■■□□□ 1.06
ZC3H8-201ENST00000272570 SHROOM2Q13796 1616 aa21.65■■□□□ 1.06
ZC3H8-201ENST00000272570 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
ZC3H8-201ENST00000272570 FHAD1B1AJZ9 1412 aa21.55■■□□□ 1.04
ZC3H8-201ENST00000272570 BIVM-ERCC5R4GMW8 1640 aa21.52■■□□□ 1.03
ZC3H8-201ENST00000272570 TOP2BQ02880 1626 aa21.49■■□□□ 1.03
ZC3H8-201ENST00000272570 ERICH3Q5RHP9 1530 aa21.48■■□□□ 1.03
ZC3H8-201ENST00000272570 PRG4Q92954 1404 aaPredicted RBP21.47■■□□□ 1.03
ZC3H8-201ENST00000272570 ABCC10Q5T3U5 1492 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms