RNA–Protein interactions for RNA: ENST00000409573.6

ZC3H8-202, Transcript of zinc finger CCCH-type containing 8, humanhuman

APPRIS P2 TSL 5 BASIC

Gene ZC3H8, Length 5,965 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H8-202ENST00000409573 NISCHQ9Y2I1 1504 aa15.64■□□□□ 0.09
ZC3H8-202ENST00000409573 DCAF8L2P0C7V8 631 aa13.7□□□□□ -0.22
ZC3H8-202ENST00000409573 CCDC180Q9P1Z9 1646 aa13.31□□□□□ -0.28
ZC3H8-202ENST00000409573 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
ZC3H8-202ENST00000409573 ABCC9O60706 1549 aa13.23□□□□□ -0.29
ZC3H8-202ENST00000409573 ZCCHC6Q5VYS8 1495 aaKnown RBP13.07□□□□□ -0.32
ZC3H8-202ENST00000409573 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
ZC3H8-202ENST00000409573 DCAF1Q9Y4B6 1507 aa12.71□□□□□ -0.37
ZC3H8-202ENST00000409573 PABPN1Q86U42 306 aaKnown RBP eCLIP12.66□□□□□ -0.38
ZC3H8-202ENST00000409573 MYT1Q01538 1121 aa12.64□□□□□ -0.39
ZC3H8-202ENST00000409573 SCRIBQ14160 1630 aa12.62□□□□□ -0.39
ZC3H8-202ENST00000409573 NACADO15069 1562 aa12.6□□□□□ -0.39
ZC3H8-202ENST00000409573 RB1CC1Q8TDY2 1594 aa12.55□□□□□ -0.4
ZC3H8-202ENST00000409573 MYO15BQ96JP2 1530 aa12.54□□□□□ -0.4
ZC3H8-202ENST00000409573 SLC24A1O60721 1099 aa12.51□□□□□ -0.41
ZC3H8-202ENST00000409573 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.43
ZC3H8-202ENST00000409573 RSF1Q96T23 1441 aaPredicted RBP12.26□□□□□ -0.45
ZC3H8-202ENST00000409573 PELP1Q8IZL8 1130 aaKnown RBP12.23□□□□□ -0.45
ZC3H8-202ENST00000409573 MROH2BQ7Z745 1585 aa12.16□□□□□ -0.46
ZC3H8-202ENST00000409573 BICRAQ9NZM4 1560 aa12.12□□□□□ -0.47
ZC3H8-202ENST00000409573 TTBK1Q5TCY1 1321 aaPredicted RBP12.1□□□□□ -0.47
ZC3H8-202ENST00000409573 CHIC1Q5VXU3 224 aa12.09□□□□□ -0.47
ZC3H8-202ENST00000409573 BAZ1AQ9NRL2 1556 aaPredicted RBP12.07□□□□□ -0.48
ZC3H8-202ENST00000409573 UNC13AQ9UPW8 1703 aa12.03□□□□□ -0.48
ZC3H8-202ENST00000409573 ERICH6Q7L0X2 663 aa11.99□□□□□ -0.49
ZC3H8-202ENST00000409573 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
ZC3H8-202ENST00000409573 FAM9AQ8IZU1 332 aaPredicted RBP11.98□□□□□ -0.49
ZC3H8-202ENST00000409573 WIZO95785 1651 aa11.97□□□□□ -0.49
ZC3H8-202ENST00000409573 EHMT2Q96KQ7 1210 aa11.96□□□□□ -0.5
ZC3H8-202ENST00000409573 SMARCA4P51532 1647 aa11.94□□□□□ -0.5
ZC3H8-202ENST00000409573 ATAD2BQ9ULI0 1458 aa11.91□□□□□ -0.5
ZC3H8-202ENST00000409573 BAZ1BQ9UIG0 1483 aaKnown RBP11.89□□□□□ -0.51
ZC3H8-202ENST00000409573 EIF4G1Q04637 1599 aaKnown RBP11.86□□□□□ -0.51
ZC3H8-202ENST00000409573 DNAJC5BQ9UF47 199 aa11.83□□□□□ -0.52
ZC3H8-202ENST00000409573 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
ZC3H8-202ENST00000409573 SMARCA2P51531 1590 aa11.79□□□□□ -0.52
ZC3H8-202ENST00000409573 TOP2AP11388 1531 aaKnown RBP11.79□□□□□ -0.52
ZC3H8-202ENST00000409573 LOC105371045A0A1W2PR82 267 aa11.78□□□□□ -0.52
ZC3H8-202ENST00000409573 NCAPD3P42695 1498 aa11.76□□□□□ -0.53
ZC3H8-202ENST00000409573 RANGAP1P46060 587 aaPredicted RBP11.72□□□□□ -0.53
ZC3H8-202ENST00000409573 CC2D2AQ9P2K1 1620 aa11.68□□□□□ -0.54
ZC3H8-202ENST00000409573 PEG3Q9GZU2 1588 aa11.66□□□□□ -0.54
ZC3H8-202ENST00000409573 ABCC8Q09428 1581 aa11.62□□□□□ -0.55
ZC3H8-202ENST00000409573 WRNQ14191 1432 aaPredicted RBP eCLIP11.6□□□□□ -0.55
ZC3H8-202ENST00000409573 CADPSQ9ULU8 1353 aa11.6□□□□□ -0.55
ZC3H8-202ENST00000409573 HMGXB3Q12766 1538 aa11.59□□□□□ -0.55
ZC3H8-202ENST00000409573 UBTFP17480 764 aaKnown RBP11.57□□□□□ -0.56
ZC3H8-202ENST00000409573 NESP48681 1621 aa11.53□□□□□ -0.56
ZC3H8-202ENST00000409573 CSRNP3Q8WYN3 585 aa11.53□□□□□ -0.56
ZC3H8-202ENST00000409573 CFTRP13569 1480 aa11.5□□□□□ -0.57
ZC3H8-202ENST00000409573 SOGA1O94964 1423 aa11.5□□□□□ -0.57
ZC3H8-202ENST00000409573 DAXXQ9UER7 740 aaPredicted RBP11.47□□□□□ -0.57
ZC3H8-202ENST00000409573 RUSC2Q8N2Y8 1516 aa11.43□□□□□ -0.58
ZC3H8-202ENST00000409573 FANCD2Q9BXW9 1451 aa11.43□□□□□ -0.58
ZC3H8-202ENST00000409573 PDS5BQ9NTI5 1447 aa11.4□□□□□ -0.58
ZC3H8-202ENST00000409573 PPARGC1BQ86YN6 1023 aaKnown RBP11.4□□□□□ -0.58
ZC3H8-202ENST00000409573 SYNJ1O43426 1573 aa11.37□□□□□ -0.59
ZC3H8-202ENST00000409573 ERCC6Q03468 1493 aa11.34□□□□□ -0.59
ZC3H8-202ENST00000409573 TDRD9Q8NDG6 1382 aaKnown RBP11.34□□□□□ -0.59
ZC3H8-202ENST00000409573 CEP164Q9UPV0 1460 aa11.33□□□□□ -0.59
ZC3H8-202ENST00000409573 CUX2O14529 1486 aa11.33□□□□□ -0.6
ZC3H8-202ENST00000409573 CUX1P39880 1505 aa11.32□□□□□ -0.6
ZC3H8-202ENST00000409573 KIF27Q86VH2 1401 aa11.31□□□□□ -0.6
ZC3H8-202ENST00000409573 EEA1Q15075 1411 aa11.3□□□□□ -0.6
ZC3H8-202ENST00000409573 FGD5Q6ZNL6 1462 aa11.29□□□□□ -0.6
ZC3H8-202ENST00000409573 RAD54L2Q9Y4B4 1467 aa11.29□□□□□ -0.6
ZC3H8-202ENST00000409573 PCGF6Q9BYE7 350 aa11.29□□□□□ -0.6
ZC3H8-202ENST00000409573 FBLN2P98095 1184 aa11.28□□□□□ -0.6
ZC3H8-202ENST00000409573 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
ZC3H8-202ENST00000409573 LAMC3Q9Y6N6 1575 aa11.25□□□□□ -0.61
ZC3H8-202ENST00000409573 P3H3Q8IVL6 736 aa11.24□□□□□ -0.61
ZC3H8-202ENST00000409573 ATP1B4Q9UN42 357 aaPredicted RBP11.24□□□□□ -0.61
ZC3H8-202ENST00000409573 TOP2BQ02880 1626 aa11.23□□□□□ -0.61
ZC3H8-202ENST00000409573 POLA1P09884 1462 aaPredicted RBP11.23□□□□□ -0.61
ZC3H8-202ENST00000409573 APLP2Q06481 763 aa11.22□□□□□ -0.61
ZC3H8-202ENST00000409573 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
ZC3H8-202ENST00000409573 IGF1RP08069 1367 aa11.22□□□□□ -0.61
ZC3H8-202ENST00000409573 CARMIL1Q5VZK9 1371 aa11.22□□□□□ -0.61
ZC3H8-202ENST00000409573 RAPGEF2Q9Y4G8 1499 aa11.21□□□□□ -0.61
ZC3H8-202ENST00000409573 GOLGA3Q08378 1498 aa11.21□□□□□ -0.62
ZC3H8-202ENST00000409573 TNIKQ9UKE5 1360 aa11.19□□□□□ -0.62
ZC3H8-202ENST00000409573 CEP162Q5TB80 1403 aa11.19□□□□□ -0.62
ZC3H8-202ENST00000409573 AQRO60306 1485 aaKnown RBP eCLIP11.17□□□□□ -0.62
ZC3H8-202ENST00000409573 CLIP1P30622 1438 aa11.16□□□□□ -0.62
ZC3H8-202ENST00000409573 DNMBPQ6XZF7 1577 aa11.15□□□□□ -0.62
ZC3H8-202ENST00000409573 MRC2Q9UBG0 1479 aa11.14□□□□□ -0.63
ZC3H8-202ENST00000409573 CHMP7Q8WUX9 453 aaPredicted RBP11.14□□□□□ -0.63
ZC3H8-202ENST00000409573 GAPVD1Q14C86 1478 aa11.11□□□□□ -0.63
ZC3H8-202ENST00000409573 PRXQ9BXM0 1461 aa11.1□□□□□ -0.63
ZC3H8-202ENST00000409573 BIVM-ERCC5R4GMW8 1640 aa11.1□□□□□ -0.63
ZC3H8-202ENST00000409573 ARID3CA6NKF2 412 aa11.09□□□□□ -0.63
ZC3H8-202ENST00000409573 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
ZC3H8-202ENST00000409573 ABCA10Q8WWZ4 1543 aa11.08□□□□□ -0.64
ZC3H8-202ENST00000409573 TRIM26Q12899 539 aaPredicted RBP11.08□□□□□ -0.64
ZC3H8-202ENST00000409573 KIF21AQ7Z4S6 1674 aa11.06□□□□□ -0.64
ZC3H8-202ENST00000409573 AMER1Q5JTC6 1135 aaPredicted RBP11.04□□□□□ -0.64
ZC3H8-202ENST00000409573 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.02□□□□□ -0.65
ZC3H8-202ENST00000409573 HNRNPUL2Q1KMD3 747 aaKnown RBP11.02□□□□□ -0.65
ZC3H8-202ENST00000409573 EIF5BO60841 1220 aaKnown RBP11.01□□□□□ -0.65
ZC3H8-202ENST00000409573 IFT140Q96RY7 1462 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms