RNA–Protein interactions for RNA: ENST00000460259.1

NDUFV3-203, Transcript of NADH:ubiquinone oxidoreductase subunit V3, humanhuman

TSL 2

Gene NDUFV3, Length 2,029 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFV3-203ENST00000460259 NISCHQ9Y2I1 1504 aa32.73■■■□□ 2.83
NDUFV3-203ENST00000460259 CCDC180Q9P1Z9 1646 aa28.37■■■□□ 2.13
NDUFV3-203ENST00000460259 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
NDUFV3-203ENST00000460259 DCAF1Q9Y4B6 1507 aa27.05■■□□□ 1.92
NDUFV3-203ENST00000460259 SHROOM4Q9ULL8 1493 aa26.89■■□□□ 1.89
NDUFV3-203ENST00000460259 DCAF8L2P0C7V8 631 aa26.85■■□□□ 1.89
NDUFV3-203ENST00000460259 ABCC9O60706 1549 aa26.62■■□□□ 1.85
NDUFV3-203ENST00000460259 MYO15BQ96JP2 1530 aa26.62■■□□□ 1.85
NDUFV3-203ENST00000460259 NACADO15069 1562 aa26.35■■□□□ 1.81
NDUFV3-203ENST00000460259 SCRIBQ14160 1630 aa26.16■■□□□ 1.78
NDUFV3-203ENST00000460259 RB1CC1Q8TDY2 1594 aa26.05■■□□□ 1.76
NDUFV3-203ENST00000460259 SUPT5HO00267 1087 aaKnown RBP25.95■■□□□ 1.74
NDUFV3-203ENST00000460259 UNC13AQ9UPW8 1703 aa25.63■■□□□ 1.69
NDUFV3-203ENST00000460259 RSF1Q96T23 1441 aaPredicted RBP25.51■■□□□ 1.67
NDUFV3-203ENST00000460259 CECR2Q9BXF3 1484 aa25.46■■□□□ 1.67
NDUFV3-203ENST00000460259 BICRAQ9NZM4 1560 aa25.38■■□□□ 1.65
NDUFV3-203ENST00000460259 MROH2BQ7Z745 1585 aa25.33■■□□□ 1.65
NDUFV3-203ENST00000460259 BAZ1AQ9NRL2 1556 aaPredicted RBP25.21■■□□□ 1.63
NDUFV3-203ENST00000460259 PABPN1Q86U42 306 aaKnown RBP eCLIP25.17■■□□□ 1.62
NDUFV3-203ENST00000460259 WIZO95785 1651 aa25.13■■□□□ 1.61
NDUFV3-203ENST00000460259 SMARCA4P51532 1647 aa25.1■■□□□ 1.61
NDUFV3-203ENST00000460259 CHIC1Q5VXU3 224 aa25.03■■□□□ 1.6
NDUFV3-203ENST00000460259 TOP2AP11388 1531 aaKnown RBP24.84■■□□□ 1.57
NDUFV3-203ENST00000460259 PEG3Q9GZU2 1588 aa24.79■■□□□ 1.56
NDUFV3-203ENST00000460259 SMARCA2P51531 1590 aa24.64■■□□□ 1.54
NDUFV3-203ENST00000460259 ATAD2BQ9ULI0 1458 aa24.63■■□□□ 1.53
NDUFV3-203ENST00000460259 CCDC88BA6NC98 1476 aa24.61■■□□□ 1.53
NDUFV3-203ENST00000460259 EIF4G1Q04637 1599 aaKnown RBP24.61■■□□□ 1.53
NDUFV3-203ENST00000460259 BAZ1BQ9UIG0 1483 aaKnown RBP24.46■■□□□ 1.51
NDUFV3-203ENST00000460259 NCAPD3P42695 1498 aa24.36■■□□□ 1.49
NDUFV3-203ENST00000460259 TRIM41Q8WV44 630 aa24.35■■□□□ 1.49
NDUFV3-203ENST00000460259 HMGXB3Q12766 1538 aa24.34■■□□□ 1.49
NDUFV3-203ENST00000460259 ABCC8Q09428 1581 aa24.2■■□□□ 1.46
NDUFV3-203ENST00000460259 CC2D2AQ9P2K1 1620 aa24.11■■□□□ 1.45
NDUFV3-203ENST00000460259 LOC105371045A0A1W2PR82 267 aa24.1■■□□□ 1.45
NDUFV3-203ENST00000460259 WRNQ14191 1432 aaPredicted RBP eCLIP23.96■■□□□ 1.43
NDUFV3-203ENST00000460259 FAM9AQ8IZU1 332 aaPredicted RBP23.94■■□□□ 1.42
NDUFV3-203ENST00000460259 SYNJ1O43426 1573 aa23.9■■□□□ 1.42
NDUFV3-203ENST00000460259 CFTRP13569 1480 aa23.9■■□□□ 1.42
NDUFV3-203ENST00000460259 SOGA1O94964 1423 aa23.8■■□□□ 1.4
NDUFV3-203ENST00000460259 PRDM2Q13029 1718 aa23.76■■□□□ 1.39
NDUFV3-203ENST00000460259 TOP2BQ02880 1626 aa23.75■■□□□ 1.39
NDUFV3-203ENST00000460259 CADPSQ9ULU8 1353 aa23.74■■□□□ 1.39
NDUFV3-203ENST00000460259 BIVM-ERCC5R4GMW8 1640 aa23.73■■□□□ 1.39
NDUFV3-203ENST00000460259 RUSC2Q8N2Y8 1516 aa23.73■■□□□ 1.39
NDUFV3-203ENST00000460259 EEA1Q15075 1411 aa23.71■■□□□ 1.39
NDUFV3-203ENST00000460259 CUX1P39880 1505 aa23.66■■□□□ 1.38
NDUFV3-203ENST00000460259 EHMT2Q96KQ7 1210 aa23.6■■□□□ 1.37
NDUFV3-203ENST00000460259 CSRNP3Q8WYN3 585 aa23.58■■□□□ 1.37
NDUFV3-203ENST00000460259 PCGF6Q9BYE7 350 aa23.58■■□□□ 1.37
NDUFV3-203ENST00000460259 DNAJC5BQ9UF47 199 aa23.54■■□□□ 1.36
NDUFV3-203ENST00000460259 NESP48681 1621 aa23.51■■□□□ 1.35
NDUFV3-203ENST00000460259 FANCD2Q9BXW9 1451 aa23.48■■□□□ 1.35
NDUFV3-203ENST00000460259 HRCP23327 699 aa23.47■■□□□ 1.35
NDUFV3-203ENST00000460259 LAMC3Q9Y6N6 1575 aa23.45■■□□□ 1.34
NDUFV3-203ENST00000460259 KIF21BO75037 1637 aa23.44■■□□□ 1.34
NDUFV3-203ENST00000460259 GOLGA3Q08378 1498 aa23.42■■□□□ 1.34
NDUFV3-203ENST00000460259 TNIKQ9UKE5 1360 aa23.41■■□□□ 1.34
NDUFV3-203ENST00000460259 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.34
NDUFV3-203ENST00000460259 FGD5Q6ZNL6 1462 aa23.33■■□□□ 1.32
NDUFV3-203ENST00000460259 CEP162Q5TB80 1403 aa23.32■■□□□ 1.32
NDUFV3-203ENST00000460259 DNMBPQ6XZF7 1577 aa23.31■■□□□ 1.32
NDUFV3-203ENST00000460259 KIF27Q86VH2 1401 aa23.29■■□□□ 1.32
NDUFV3-203ENST00000460259 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
NDUFV3-203ENST00000460259 TRIM26Q12899 539 aaPredicted RBP23.29■■□□□ 1.32
NDUFV3-203ENST00000460259 PRXQ9BXM0 1461 aa23.28■■□□□ 1.32
NDUFV3-203ENST00000460259 TOPBP1Q92547 1522 aa23.27■■□□□ 1.32
NDUFV3-203ENST00000460259 UBTFP17480 764 aaKnown RBP23.26■■□□□ 1.31
NDUFV3-203ENST00000460259 PDS5BQ9NTI5 1447 aa23.23■■□□□ 1.31
NDUFV3-203ENST00000460259 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
NDUFV3-203ENST00000460259 URB2Q14146 1524 aaKnown RBP23.21■■□□□ 1.31
NDUFV3-203ENST00000460259 CUX2O14529 1486 aa23.21■■□□□ 1.31
NDUFV3-203ENST00000460259 KIF21AQ7Z4S6 1674 aa23.19■■□□□ 1.3
NDUFV3-203ENST00000460259 POLA1P09884 1462 aaPredicted RBP23.19■■□□□ 1.3
NDUFV3-203ENST00000460259 IGF1RP08069 1367 aa23.13■■□□□ 1.29
NDUFV3-203ENST00000460259 RAD54L2Q9Y4B4 1467 aa23.13■■□□□ 1.29
NDUFV3-203ENST00000460259 ABCA10Q8WWZ4 1543 aa23.13■■□□□ 1.29
NDUFV3-203ENST00000460259 CLIP1P30622 1438 aa23.06■■□□□ 1.28
NDUFV3-203ENST00000460259 WDR97A6NE52 1622 aa23.06■■□□□ 1.28
NDUFV3-203ENST00000460259 CARMIL1Q5VZK9 1371 aa22.97■■□□□ 1.27
NDUFV3-203ENST00000460259 MRC2Q9UBG0 1479 aa22.96■■□□□ 1.27
NDUFV3-203ENST00000460259 ABCA5Q8WWZ7 1642 aa22.94■■□□□ 1.26
NDUFV3-203ENST00000460259 TARBP1Q13395 1621 aaKnown RBP22.93■■□□□ 1.26
NDUFV3-203ENST00000460259 PPARGC1BQ86YN6 1023 aaKnown RBP22.92■■□□□ 1.26
NDUFV3-203ENST00000460259 VPS8Q8N3P4 1428 aa22.91■■□□□ 1.26
NDUFV3-203ENST00000460259 CUL7Q14999 1698 aa22.87■■□□□ 1.25
NDUFV3-203ENST00000460259 ARAP1Q96P48 1450 aa22.87■■□□□ 1.25
NDUFV3-203ENST00000460259 WDR62O43379 1518 aa22.86■■□□□ 1.25
NDUFV3-203ENST00000460259 TDRD9Q8NDG6 1382 aaKnown RBP22.85■■□□□ 1.25
NDUFV3-203ENST00000460259 GAPVD1Q14C86 1478 aa22.83■■□□□ 1.25
NDUFV3-203ENST00000460259 RANGAP1P46060 587 aaPredicted RBP22.82■■□□□ 1.24
NDUFV3-203ENST00000460259 ARHGAP35Q9NRY4 1499 aa22.8■■□□□ 1.24
NDUFV3-203ENST00000460259 THOC2Q8NI27 1593 aaKnown RBP22.75■■□□□ 1.23
NDUFV3-203ENST00000460259 ERCC6Q03468 1493 aa22.72■■□□□ 1.23
NDUFV3-203ENST00000460259 IFT140Q96RY7 1462 aa22.71■■□□□ 1.23
NDUFV3-203ENST00000460259 ZEB1P37275 1124 aaPredicted RBP22.7■■□□□ 1.23
NDUFV3-203ENST00000460259 PBRM1Q86U86 1689 aa22.69■■□□□ 1.22
NDUFV3-203ENST00000460259 AQRO60306 1485 aaKnown RBP eCLIP22.68■■□□□ 1.22
NDUFV3-203ENST00000460259 CTTNBP2Q8WZ74 1663 aa22.67■■□□□ 1.22
NDUFV3-203ENST00000460259 TTBK1Q5TCY1 1321 aaPredicted RBP22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms