Protein–RNA interactions for Protein: Q9UNE2

RPH3AL, Rab effector Noc2, humanhuman

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3ALQ9UNE2 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
RPH3ALQ9UNE2 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 PPP3CA-202ENST00000394853 3604 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 STRCP1-201ENST00000509801 5328 ntBASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 FAM45BP-202ENST00000592932 1624 ntBASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 AL109954.1-202ENST00000564051 2148 ntBASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
RPH3ALQ9UNE2 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 AC020658.6-201ENST00000623564 1870 ntBASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 AC006486.2-201ENST00000624246 2199 ntBASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 HCG4-201ENST00000418983 998 ntBASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 KRT16P4-201ENST00000453883 522 ntBASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 AC107918.2-201ENST00000530817 355 ntBASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 AC005412.3-201ENST00000580309 715 ntBASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 MIR3180-1-201ENST00000580374 94 ntBASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 MIR3180-3-201ENST00000584616 94 ntBASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 MTDHP4-201ENST00000600287 670 ntBASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 BSG-214ENST00000614867 960 ntTSL 3 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 WASHC2C-210ENST00000623400 4616 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 NR3C2-209ENST00000625323 5909 ntTSL 5 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
RPH3ALQ9UNE2 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms