RNA–Protein interactions for RNA: ENST00000635370.1

ATP6V1C2-204, Transcript of ATPase H+ transporting V1 subunit C2, humanhuman

TSL 5 BASIC

Gene ATP6V1C2, Length 1,578 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1C2-204ENST00000635370 NISCHQ9Y2I1 1504 aa39.38■■■■□ 3.89
ATP6V1C2-204ENST00000635370 CCDC180Q9P1Z9 1646 aa34.71■■■■□ 3.15
ATP6V1C2-204ENST00000635370 ABCC9O60706 1549 aa33.41■■■□□ 2.94
ATP6V1C2-204ENST00000635370 ZCCHC6Q5VYS8 1495 aaKnown RBP32.94■■■□□ 2.86
ATP6V1C2-204ENST00000635370 DCAF8L2P0C7V8 631 aa32.73■■■□□ 2.83
ATP6V1C2-204ENST00000635370 DCAF1Q9Y4B6 1507 aa32.58■■■□□ 2.81
ATP6V1C2-204ENST00000635370 NACADO15069 1562 aa32.48■■■□□ 2.79
ATP6V1C2-204ENST00000635370 MYO15BQ96JP2 1530 aa32.47■■■□□ 2.79
ATP6V1C2-204ENST00000635370 RB1CC1Q8TDY2 1594 aa32.39■■■□□ 2.78
ATP6V1C2-204ENST00000635370 SCRIBQ14160 1630 aa31.78■■■□□ 2.68
ATP6V1C2-204ENST00000635370 UNC13AQ9UPW8 1703 aa31.65■■■□□ 2.66
ATP6V1C2-204ENST00000635370 SHROOM4Q9ULL8 1493 aa31.57■■■□□ 2.64
ATP6V1C2-204ENST00000635370 BICRAQ9NZM4 1560 aa31.36■■■□□ 2.61
ATP6V1C2-204ENST00000635370 PABPN1Q86U42 306 aaKnown RBP eCLIP31.34■■■□□ 2.61
ATP6V1C2-204ENST00000635370 CECR2Q9BXF3 1484 aa30.62■■■□□ 2.49
ATP6V1C2-204ENST00000635370 EIF4G1Q04637 1599 aaKnown RBP30.51■■■□□ 2.48
ATP6V1C2-204ENST00000635370 BAZ1AQ9NRL2 1556 aaPredicted RBP30.49■■■□□ 2.47
ATP6V1C2-204ENST00000635370 SMARCA4P51532 1647 aa30.42■■■□□ 2.46
ATP6V1C2-204ENST00000635370 MROH2BQ7Z745 1585 aa30.37■■■□□ 2.45
ATP6V1C2-204ENST00000635370 RSF1Q96T23 1441 aaPredicted RBP30.25■■■□□ 2.43
ATP6V1C2-204ENST00000635370 CC2D2AQ9P2K1 1620 aa30.23■■■□□ 2.43
ATP6V1C2-204ENST00000635370 ATAD2BQ9ULI0 1458 aa30.1■■■□□ 2.41
ATP6V1C2-204ENST00000635370 WIZO95785 1651 aa30.09■■■□□ 2.41
ATP6V1C2-204ENST00000635370 SMARCA2P51531 1590 aa30.09■■■□□ 2.41
ATP6V1C2-204ENST00000635370 PEG3Q9GZU2 1588 aa30.09■■■□□ 2.41
ATP6V1C2-204ENST00000635370 DNAJC5BQ9UF47 199 aa30.06■■■□□ 2.4
ATP6V1C2-204ENST00000635370 SUPT5HO00267 1087 aaKnown RBP30.03■■■□□ 2.4
ATP6V1C2-204ENST00000635370 NCAPD3P42695 1498 aa29.96■■■□□ 2.39
ATP6V1C2-204ENST00000635370 BAZ1BQ9UIG0 1483 aaKnown RBP29.9■■■□□ 2.38
ATP6V1C2-204ENST00000635370 HMGXB3Q12766 1538 aa29.88■■■□□ 2.37
ATP6V1C2-204ENST00000635370 TOP2AP11388 1531 aaKnown RBP29.79■■■□□ 2.36
ATP6V1C2-204ENST00000635370 CCDC88BA6NC98 1476 aa29.45■■■□□ 2.3
ATP6V1C2-204ENST00000635370 CADPSQ9ULU8 1353 aa29.15■■■□□ 2.26
ATP6V1C2-204ENST00000635370 CFTRP13569 1480 aa29.1■■■□□ 2.25
ATP6V1C2-204ENST00000635370 NESP48681 1621 aa29.09■■■□□ 2.25
ATP6V1C2-204ENST00000635370 LAMC3Q9Y6N6 1575 aa29.09■■■□□ 2.25
ATP6V1C2-204ENST00000635370 PRDM2Q13029 1718 aa28.92■■■□□ 2.22
ATP6V1C2-204ENST00000635370 PDS5BQ9NTI5 1447 aa28.88■■■□□ 2.21
ATP6V1C2-204ENST00000635370 FANCD2Q9BXW9 1451 aa28.82■■■□□ 2.2
ATP6V1C2-204ENST00000635370 ERCC6Q03468 1493 aa28.75■■■□□ 2.19
ATP6V1C2-204ENST00000635370 KIF21AQ7Z4S6 1674 aa28.75■■■□□ 2.19
ATP6V1C2-204ENST00000635370 CEP164Q9UPV0 1460 aa28.74■■■□□ 2.19
ATP6V1C2-204ENST00000635370 ABCC8Q09428 1581 aa28.59■■■□□ 2.17
ATP6V1C2-204ENST00000635370 MRC2Q9UBG0 1479 aa28.55■■■□□ 2.16
ATP6V1C2-204ENST00000635370 WRNQ14191 1432 aaPredicted RBP eCLIP28.52■■■□□ 2.16
ATP6V1C2-204ENST00000635370 URB2Q14146 1524 aaKnown RBP28.49■■■□□ 2.15
ATP6V1C2-204ENST00000635370 THOC2Q8NI27 1593 aaKnown RBP28.49■■■□□ 2.15
ATP6V1C2-204ENST00000635370 CUX1P39880 1505 aa28.45■■■□□ 2.15
ATP6V1C2-204ENST00000635370 DNMBPQ6XZF7 1577 aa28.45■■■□□ 2.14
ATP6V1C2-204ENST00000635370 WDR62O43379 1518 aa28.43■■■□□ 2.14
ATP6V1C2-204ENST00000635370 TOPBP1Q92547 1522 aa28.43■■■□□ 2.14
ATP6V1C2-204ENST00000635370 SYNJ1O43426 1573 aa28.42■■■□□ 2.14
ATP6V1C2-204ENST00000635370 TOP2BQ02880 1626 aa28.37■■■□□ 2.13
ATP6V1C2-204ENST00000635370 BIVM-ERCC5R4GMW8 1640 aa28.36■■■□□ 2.13
ATP6V1C2-204ENST00000635370 CHIC1Q5VXU3 224 aa28.36■■■□□ 2.13
ATP6V1C2-204ENST00000635370 TRIM41Q8WV44 630 aa28.32■■■□□ 2.12
ATP6V1C2-204ENST00000635370 FGD5Q6ZNL6 1462 aa28.27■■■□□ 2.12
ATP6V1C2-204ENST00000635370 POLA1P09884 1462 aaPredicted RBP28.24■■■□□ 2.11
ATP6V1C2-204ENST00000635370 CUX2O14529 1486 aa28.17■■■□□ 2.1
ATP6V1C2-204ENST00000635370 SOGA1O94964 1423 aa28.14■■■□□ 2.1
ATP6V1C2-204ENST00000635370 RAD54L2Q9Y4B4 1467 aa28.12■■■□□ 2.09
ATP6V1C2-204ENST00000635370 IFT140Q96RY7 1462 aa28.09■■■□□ 2.09
ATP6V1C2-204ENST00000635370 TARBP1Q13395 1621 aaKnown RBP28.06■■■□□ 2.08
ATP6V1C2-204ENST00000635370 ABCA10Q8WWZ4 1543 aa28.01■■■□□ 2.07
ATP6V1C2-204ENST00000635370 WDR97A6NE52 1622 aa27.98■■■□□ 2.07
ATP6V1C2-204ENST00000635370 ZNF608Q9ULD9 1512 aaPredicted RBP27.93■■■□□ 2.06
ATP6V1C2-204ENST00000635370 TDRD9Q8NDG6 1382 aaKnown RBP27.91■■■□□ 2.06
ATP6V1C2-204ENST00000635370 KIF27Q86VH2 1401 aa27.87■■■□□ 2.05
ATP6V1C2-204ENST00000635370 AQRO60306 1485 aaKnown RBP eCLIP27.85■■■□□ 2.05
ATP6V1C2-204ENST00000635370 EIF4G3O43432 1585 aaKnown RBP27.84■■■□□ 2.05
ATP6V1C2-204ENST00000635370 ABCA5Q8WWZ7 1642 aa27.84■■■□□ 2.05
ATP6V1C2-204ENST00000635370 RUSC2Q8N2Y8 1516 aa27.82■■■□□ 2.04
ATP6V1C2-204ENST00000635370 GAPVD1Q14C86 1478 aa27.82■■■□□ 2.04
ATP6V1C2-204ENST00000635370 FAM9AQ8IZU1 332 aaPredicted RBP27.75■■■□□ 2.03
ATP6V1C2-204ENST00000635370 EEA1Q15075 1411 aa27.75■■■□□ 2.03
ATP6V1C2-204ENST00000635370 GRIN2BQ13224 1484 aa27.72■■■□□ 2.03
ATP6V1C2-204ENST00000635370 PBRM1Q86U86 1689 aa27.72■■■□□ 2.03
ATP6V1C2-204ENST00000635370 ERICH3Q5RHP9 1530 aa27.68■■■□□ 2.02
ATP6V1C2-204ENST00000635370 IGF1RP08069 1367 aa27.66■■■□□ 2.02
ATP6V1C2-204ENST00000635370 CSRNP3Q8WYN3 585 aa27.64■■■□□ 2.01
ATP6V1C2-204ENST00000635370 SNAPC4Q5SXM2 1469 aa27.62■■■□□ 2.01
ATP6V1C2-204ENST00000635370 MAGI1Q96QZ7 1491 aaPredicted RBP27.58■■■□□ 2.01
ATP6V1C2-204ENST00000635370 CUL7Q14999 1698 aa27.56■■■□□ 2
ATP6V1C2-204ENST00000635370 ADAMTS12P58397 1594 aa27.54■■■□□ 2
ATP6V1C2-204ENST00000635370 CARMIL1Q5VZK9 1371 aa27.53■■■□□ 2
ATP6V1C2-204ENST00000635370 FHAD1B1AJZ9 1412 aa27.52■■■□□ 2
ATP6V1C2-204ENST00000635370 PRXQ9BXM0 1461 aa27.48■■□□□ 1.99
ATP6V1C2-204ENST00000635370 SYNJ2O15056 1496 aa27.47■■□□□ 1.99
ATP6V1C2-204ENST00000635370 RAPGEF2Q9Y4G8 1499 aa27.44■■□□□ 1.98
ATP6V1C2-204ENST00000635370 FBLN2P98095 1184 aa27.43■■□□□ 1.98
ATP6V1C2-204ENST00000635370 CHMP7Q8WUX9 453 aaPredicted RBP27.43■■□□□ 1.98
ATP6V1C2-204ENST00000635370 KIF21BO75037 1637 aa27.42■■□□□ 1.98
ATP6V1C2-204ENST00000635370 GRIN2AQ12879 1464 aa27.37■■□□□ 1.97
ATP6V1C2-204ENST00000635370 EHMT2Q96KQ7 1210 aa27.37■■□□□ 1.97
ATP6V1C2-204ENST00000635370 CHD1O14646 1710 aa27.36■■□□□ 1.97
ATP6V1C2-204ENST00000635370 GOLGA3Q08378 1498 aa27.33■■□□□ 1.97
ATP6V1C2-204ENST00000635370 UBTFP17480 764 aaKnown RBP27.23■■□□□ 1.95
ATP6V1C2-204ENST00000635370 LOC105371045A0A1W2PR82 267 aa27.22■■□□□ 1.95
ATP6V1C2-204ENST00000635370 CEP170Q5SW79 1584 aa27.22■■□□□ 1.95
ATP6V1C2-204ENST00000635370 NUP160Q12769 1436 aa27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms