RNA–Protein interactions for RNA: ENST00000425628.7

DHX40-202, Transcript of DEAH-box helicase 40, humanhuman

TSL 2 BASIC

Gene DHX40, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHX40-202ENST00000425628 NISCHQ9Y2I1 1504 aa35.1■■■■□ 3.21
DHX40-202ENST00000425628 CCDC180Q9P1Z9 1646 aa30.46■■■□□ 2.47
DHX40-202ENST00000425628 ZCCHC6Q5VYS8 1495 aaKnown RBP29.6■■■□□ 2.33
DHX40-202ENST00000425628 DCAF1Q9Y4B6 1507 aa29.03■■■□□ 2.24
DHX40-202ENST00000425628 SHROOM4Q9ULL8 1493 aa28.93■■■□□ 2.22
DHX40-202ENST00000425628 DCAF8L2P0C7V8 631 aa28.74■■■□□ 2.19
DHX40-202ENST00000425628 MYO15BQ96JP2 1530 aa28.51■■■□□ 2.15
DHX40-202ENST00000425628 ABCC9O60706 1549 aa28.33■■■□□ 2.13
DHX40-202ENST00000425628 NACADO15069 1562 aa28.21■■■□□ 2.11
DHX40-202ENST00000425628 SCRIBQ14160 1630 aa28.06■■■□□ 2.08
DHX40-202ENST00000425628 SUPT5HO00267 1087 aaKnown RBP28.02■■■□□ 2.08
DHX40-202ENST00000425628 RB1CC1Q8TDY2 1594 aa27.87■■■□□ 2.05
DHX40-202ENST00000425628 UNC13AQ9UPW8 1703 aa27.43■■□□□ 1.98
DHX40-202ENST00000425628 RSF1Q96T23 1441 aaPredicted RBP27.39■■□□□ 1.98
DHX40-202ENST00000425628 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
DHX40-202ENST00000425628 MROH2BQ7Z745 1585 aa27.15■■□□□ 1.94
DHX40-202ENST00000425628 BAZ1AQ9NRL2 1556 aaPredicted RBP27.08■■□□□ 1.93
DHX40-202ENST00000425628 CHIC1Q5VXU3 224 aa27.07■■□□□ 1.92
DHX40-202ENST00000425628 BICRAQ9NZM4 1560 aa27.05■■□□□ 1.92
DHX40-202ENST00000425628 WIZO95785 1651 aa26.99■■□□□ 1.91
DHX40-202ENST00000425628 SMARCA4P51532 1647 aa26.93■■□□□ 1.9
DHX40-202ENST00000425628 PABPN1Q86U42 306 aaKnown RBP eCLIP26.76■■□□□ 1.87
DHX40-202ENST00000425628 TOP2AP11388 1531 aaKnown RBP26.7■■□□□ 1.86
DHX40-202ENST00000425628 PEG3Q9GZU2 1588 aa26.57■■□□□ 1.84
DHX40-202ENST00000425628 EIF4G1Q04637 1599 aaKnown RBP26.49■■□□□ 1.83
DHX40-202ENST00000425628 SMARCA2P51531 1590 aa26.47■■□□□ 1.83
DHX40-202ENST00000425628 CCDC88BA6NC98 1476 aa26.4■■□□□ 1.82
DHX40-202ENST00000425628 ATAD2BQ9ULI0 1458 aa26.32■■□□□ 1.8
DHX40-202ENST00000425628 TRIM41Q8WV44 630 aa26.3■■□□□ 1.8
DHX40-202ENST00000425628 BAZ1BQ9UIG0 1483 aaKnown RBP26.21■■□□□ 1.79
DHX40-202ENST00000425628 HMGXB3Q12766 1538 aa26.06■■□□□ 1.76
DHX40-202ENST00000425628 LOC105371045A0A1W2PR82 267 aa26.04■■□□□ 1.76
DHX40-202ENST00000425628 ABCC8Q09428 1581 aa26.03■■□□□ 1.76
DHX40-202ENST00000425628 NCAPD3P42695 1498 aa26■■□□□ 1.75
DHX40-202ENST00000425628 FAM9AQ8IZU1 332 aaPredicted RBP25.84■■□□□ 1.73
DHX40-202ENST00000425628 WRNQ14191 1432 aaPredicted RBP eCLIP25.76■■□□□ 1.71
DHX40-202ENST00000425628 SYNJ1O43426 1573 aa25.7■■□□□ 1.7
DHX40-202ENST00000425628 CC2D2AQ9P2K1 1620 aa25.68■■□□□ 1.7
DHX40-202ENST00000425628 EEA1Q15075 1411 aa25.64■■□□□ 1.69
DHX40-202ENST00000425628 PRDM2Q13029 1718 aa25.6■■□□□ 1.69
DHX40-202ENST00000425628 SOGA1O94964 1423 aa25.59■■□□□ 1.69
DHX40-202ENST00000425628 CFTRP13569 1480 aa25.56■■□□□ 1.68
DHX40-202ENST00000425628 TOP2BQ02880 1626 aa25.55■■□□□ 1.68
DHX40-202ENST00000425628 BIVM-ERCC5R4GMW8 1640 aa25.55■■□□□ 1.68
DHX40-202ENST00000425628 RUSC2Q8N2Y8 1516 aa25.48■■□□□ 1.67
DHX40-202ENST00000425628 EHMT2Q96KQ7 1210 aa25.46■■□□□ 1.67
DHX40-202ENST00000425628 CSRNP3Q8WYN3 585 aa25.4■■□□□ 1.66
DHX40-202ENST00000425628 CUX1P39880 1505 aa25.36■■□□□ 1.65
DHX40-202ENST00000425628 CADPSQ9ULU8 1353 aa25.36■■□□□ 1.65
DHX40-202ENST00000425628 KIF21BO75037 1637 aa25.34■■□□□ 1.65
DHX40-202ENST00000425628 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.64
DHX40-202ENST00000425628 GOLGA3Q08378 1498 aa25.32■■□□□ 1.64
DHX40-202ENST00000425628 TNIKQ9UKE5 1360 aa25.3■■□□□ 1.64
DHX40-202ENST00000425628 CEP164Q9UPV0 1460 aa25.27■■□□□ 1.64
DHX40-202ENST00000425628 CEP162Q5TB80 1403 aa25.22■■□□□ 1.63
DHX40-202ENST00000425628 TRIM26Q12899 539 aaPredicted RBP25.22■■□□□ 1.63
DHX40-202ENST00000425628 FANCD2Q9BXW9 1451 aa25.11■■□□□ 1.61
DHX40-202ENST00000425628 UBTFP17480 764 aaKnown RBP25.11■■□□□ 1.61
DHX40-202ENST00000425628 LAMC3Q9Y6N6 1575 aa25.08■■□□□ 1.61
DHX40-202ENST00000425628 ERICH3Q5RHP9 1530 aa25.07■■□□□ 1.6
DHX40-202ENST00000425628 RAPGEF2Q9Y4G8 1499 aa25.07■■□□□ 1.6
DHX40-202ENST00000425628 KIF27Q86VH2 1401 aa25.06■■□□□ 1.6
DHX40-202ENST00000425628 PRXQ9BXM0 1461 aa25.03■■□□□ 1.6
DHX40-202ENST00000425628 NESP48681 1621 aa25.03■■□□□ 1.6
DHX40-202ENST00000425628 DNMBPQ6XZF7 1577 aa25■■□□□ 1.59
DHX40-202ENST00000425628 FGD5Q6ZNL6 1462 aa25■■□□□ 1.59
DHX40-202ENST00000425628 HRCP23327 699 aa25■■□□□ 1.59
DHX40-202ENST00000425628 CLIP1P30622 1438 aa24.91■■□□□ 1.58
DHX40-202ENST00000425628 CUX2O14529 1486 aa24.91■■□□□ 1.58
DHX40-202ENST00000425628 TOPBP1Q92547 1522 aa24.9■■□□□ 1.58
DHX40-202ENST00000425628 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
DHX40-202ENST00000425628 DNAJC5BQ9UF47 199 aa24.82■■□□□ 1.56
DHX40-202ENST00000425628 POLA1P09884 1462 aaPredicted RBP24.81■■□□□ 1.56
DHX40-202ENST00000425628 KIF21AQ7Z4S6 1674 aa24.8■■□□□ 1.56
DHX40-202ENST00000425628 URB2Q14146 1524 aaKnown RBP24.79■■□□□ 1.56
DHX40-202ENST00000425628 ABCA10Q8WWZ4 1543 aa24.79■■□□□ 1.56
DHX40-202ENST00000425628 PPARGC1BQ86YN6 1023 aaKnown RBP24.78■■□□□ 1.56
DHX40-202ENST00000425628 VPS8Q8N3P4 1428 aa24.78■■□□□ 1.56
DHX40-202ENST00000425628 IGF1RP08069 1367 aa24.77■■□□□ 1.56
DHX40-202ENST00000425628 WDR97A6NE52 1622 aa24.75■■□□□ 1.55
DHX40-202ENST00000425628 RAD54L2Q9Y4B4 1467 aa24.73■■□□□ 1.55
DHX40-202ENST00000425628 CARMIL1Q5VZK9 1371 aa24.66■■□□□ 1.54
DHX40-202ENST00000425628 ARAP1Q96P48 1450 aa24.65■■□□□ 1.54
DHX40-202ENST00000425628 CUL7Q14999 1698 aa24.64■■□□□ 1.54
DHX40-202ENST00000425628 ABCA5Q8WWZ7 1642 aa24.6■■□□□ 1.53
DHX40-202ENST00000425628 RANGAP1P46060 587 aaPredicted RBP24.57■■□□□ 1.52
DHX40-202ENST00000425628 ARHGAP35Q9NRY4 1499 aa24.54■■□□□ 1.52
DHX40-202ENST00000425628 TARBP1Q13395 1621 aaKnown RBP24.53■■□□□ 1.52
DHX40-202ENST00000425628 MRC2Q9UBG0 1479 aa24.52■■□□□ 1.52
DHX40-202ENST00000425628 TTBK1Q5TCY1 1321 aaPredicted RBP24.5■■□□□ 1.51
DHX40-202ENST00000425628 CTTNBP2Q8WZ74 1663 aa24.47■■□□□ 1.51
DHX40-202ENST00000425628 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
DHX40-202ENST00000425628 APLP2Q06481 763 aa24.46■■□□□ 1.51
DHX40-202ENST00000425628 ZEB1P37275 1124 aaPredicted RBP24.45■■□□□ 1.5
DHX40-202ENST00000425628 TDRD9Q8NDG6 1382 aaKnown RBP24.41■■□□□ 1.5
DHX40-202ENST00000425628 WDR62O43379 1518 aa24.39■■□□□ 1.5
DHX40-202ENST00000425628 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
DHX40-202ENST00000425628 EFCAB5A4FU69 1503 aa24.35■■□□□ 1.49
DHX40-202ENST00000425628 IFT140Q96RY7 1462 aa24.28■■□□□ 1.48
DHX40-202ENST00000425628 MAP3K1Q13233 1512 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms