Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 SDHAP3-202ENST00000515467 728 ntBASIC16.97■□□□□ 0.31
SEMA4DQ92854 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 ZNF890P-202ENST00000530367 1156 ntBASIC16.97■□□□□ 0.31
SEMA4DQ92854 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 SSH2-210ENST00000582084 560 ntTSL 3 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 AC008738.7-201ENST00000609744 511 ntBASIC16.97■□□□□ 0.31
SEMA4DQ92854 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
SEMA4DQ92854 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
SEMA4DQ92854 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 MRPS18AP1-201ENST00000414458 589 ntBASIC16.96■□□□□ 0.31
SEMA4DQ92854 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 SPDYE18-201ENST00000510091 1050 ntBASIC16.96■□□□□ 0.31
SEMA4DQ92854 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 AC074044.1-201ENST00000609673 707 ntBASIC16.96■□□□□ 0.31
SEMA4DQ92854 AC004461.2-201ENST00000629517 803 ntBASIC16.96■□□□□ 0.31
SEMA4DQ92854 AC004840.1-201ENST00000636359 365 ntBASIC16.96■□□□□ 0.31
SEMA4DQ92854 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
SEMA4DQ92854 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
SEMA4DQ92854 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
SEMA4DQ92854 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEMA4DQ92854 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEMA4DQ92854 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEMA4DQ92854 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SEMA4DQ92854 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEMA4DQ92854 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEMA4DQ92854 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 SLED1-202ENST00000512051 380 ntBASIC16.95■□□□□ 0.3
SEMA4DQ92854 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SEMA4DQ92854 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SEMA4DQ92854 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
SEMA4DQ92854 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms