RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 NISCHQ9Y2I1 1504 aa42.14■■■■■ 4.34
NECTIN1-202ENST00000340882 ABCC9O60706 1549 aa38.71■■■■□ 3.79
NECTIN1-202ENST00000340882 CCDC180Q9P1Z9 1646 aa38.06■■■■□ 3.68
NECTIN1-202ENST00000340882 DNAJC5BQ9UF47 199 aa36.95■■■■□ 3.51
NECTIN1-202ENST00000340882 RB1CC1Q8TDY2 1594 aa36.5■■■■□ 3.43
NECTIN1-202ENST00000340882 NACADO15069 1562 aa36.09■■■■□ 3.37
NECTIN1-202ENST00000340882 PABPN1Q86U42 306 aaKnown RBP eCLIP35.96■■■■□ 3.35
NECTIN1-202ENST00000340882 UNC13AQ9UPW8 1703 aa35.87■■■■□ 3.33
NECTIN1-202ENST00000340882 DCAF8L2P0C7V8 631 aa35.82■■■■□ 3.32
NECTIN1-202ENST00000340882 BICRAQ9NZM4 1560 aa35.59■■■■□ 3.29
NECTIN1-202ENST00000340882 MYO15BQ96JP2 1530 aa35.36■■■■□ 3.25
NECTIN1-202ENST00000340882 CC2D2AQ9P2K1 1620 aa34.95■■■■□ 3.18
NECTIN1-202ENST00000340882 CECR2Q9BXF3 1484 aa34.89■■■■□ 3.18
NECTIN1-202ENST00000340882 SHROOM4Q9ULL8 1493 aa34.83■■■■□ 3.17
NECTIN1-202ENST00000340882 ZCCHC6Q5VYS8 1495 aaKnown RBP34.78■■■■□ 3.16
NECTIN1-202ENST00000340882 DCAF1Q9Y4B6 1507 aa34.71■■■■□ 3.15
NECTIN1-202ENST00000340882 SCRIBQ14160 1630 aa34.7■■■■□ 3.15
NECTIN1-202ENST00000340882 EIF4G1Q04637 1599 aaKnown RBP34.7■■■■□ 3.14
NECTIN1-202ENST00000340882 DNAJC5Q9H3Z4 198 aa34.25■■■■□ 3.07
NECTIN1-202ENST00000340882 CUX2O14529 1486 aa33.52■■■□□ 2.96
NECTIN1-202ENST00000340882 ERCC6Q03468 1493 aa33.38■■■□□ 2.93
NECTIN1-202ENST00000340882 NCAPD3P42695 1498 aa33.34■■■□□ 2.93
NECTIN1-202ENST00000340882 ATAD2BQ9ULI0 1458 aa33.18■■■□□ 2.9
NECTIN1-202ENST00000340882 NESP48681 1621 aa33.13■■■□□ 2.89
NECTIN1-202ENST00000340882 HMGXB3Q12766 1538 aa33.03■■■□□ 2.88
NECTIN1-202ENST00000340882 SMARCA4P51532 1647 aa33.02■■■□□ 2.88
NECTIN1-202ENST00000340882 SMARCA2P51531 1590 aa33■■■□□ 2.87
NECTIN1-202ENST00000340882 THOC2Q8NI27 1593 aaKnown RBP32.88■■■□□ 2.85
NECTIN1-202ENST00000340882 BAZ1BQ9UIG0 1483 aaKnown RBP32.8■■■□□ 2.84
NECTIN1-202ENST00000340882 BAZ1AQ9NRL2 1556 aaPredicted RBP32.7■■■□□ 2.82
NECTIN1-202ENST00000340882 KIF21AQ7Z4S6 1674 aa32.69■■■□□ 2.82
NECTIN1-202ENST00000340882 LAMC3Q9Y6N6 1575 aa32.69■■■□□ 2.82
NECTIN1-202ENST00000340882 PEG3Q9GZU2 1588 aa32.67■■■□□ 2.82
NECTIN1-202ENST00000340882 TRIM41Q8WV44 630 aa32.52■■■□□ 2.8
NECTIN1-202ENST00000340882 MROH2BQ7Z745 1585 aa32.52■■■□□ 2.8
NECTIN1-202ENST00000340882 PDS5BQ9NTI5 1447 aa32.47■■■□□ 2.79
NECTIN1-202ENST00000340882 CADPSQ9ULU8 1353 aa32.3■■■□□ 2.76
NECTIN1-202ENST00000340882 MRC2Q9UBG0 1479 aa32.28■■■□□ 2.76
NECTIN1-202ENST00000340882 WDR62O43379 1518 aa32.25■■■□□ 2.75
NECTIN1-202ENST00000340882 WIZO95785 1651 aa32.13■■■□□ 2.73
NECTIN1-202ENST00000340882 CEP164Q9UPV0 1460 aa32.02■■■□□ 2.72
NECTIN1-202ENST00000340882 FANCD2Q9BXW9 1451 aa31.95■■■□□ 2.7
NECTIN1-202ENST00000340882 OSCARQ8IYS5 282 aa31.89■■■□□ 2.7
NECTIN1-202ENST00000340882 CFTRP13569 1480 aa31.82■■■□□ 2.68
NECTIN1-202ENST00000340882 URB2Q14146 1524 aaKnown RBP31.79■■■□□ 2.68
NECTIN1-202ENST00000340882 RIMBP3CA6NJZ7 1639 aa31.65■■■□□ 2.66
NECTIN1-202ENST00000340882 RIMBP3BA6NNM3 1639 aa31.65■■■□□ 2.66
NECTIN1-202ENST00000340882 RIMBP3Q9UFD9 1639 aa31.65■■■□□ 2.66
NECTIN1-202ENST00000340882 TOP2AP11388 1531 aaKnown RBP31.59■■■□□ 2.65
NECTIN1-202ENST00000340882 RSF1Q96T23 1441 aaPredicted RBP31.58■■■□□ 2.65
NECTIN1-202ENST00000340882 PRDM2Q13029 1718 aa31.52■■■□□ 2.64
NECTIN1-202ENST00000340882 ZNF608Q9ULD9 1512 aaPredicted RBP31.51■■■□□ 2.63
NECTIN1-202ENST00000340882 ARHGEF11O15085 1522 aa31.44■■■□□ 2.62
NECTIN1-202ENST00000340882 IFT140Q96RY7 1462 aa31.39■■■□□ 2.62
NECTIN1-202ENST00000340882 TOPBP1Q92547 1522 aa31.3■■■□□ 2.6
NECTIN1-202ENST00000340882 EIF4G3O43432 1585 aaKnown RBP31.28■■■□□ 2.6
NECTIN1-202ENST00000340882 CCDC88BA6NC98 1476 aa31.27■■■□□ 2.6
NECTIN1-202ENST00000340882 CYB5RLQ6IPT4 315 aa31.24■■■□□ 2.59
NECTIN1-202ENST00000340882 CHD1O14646 1710 aa31.22■■■□□ 2.59
NECTIN1-202ENST00000340882 AQRO60306 1485 aaKnown RBP eCLIP31.12■■■□□ 2.57
NECTIN1-202ENST00000340882 ARAP1Q96P48 1450 aa31.12■■■□□ 2.57
NECTIN1-202ENST00000340882 TARBP1Q13395 1621 aaKnown RBP31.11■■■□□ 2.57
NECTIN1-202ENST00000340882 DNMBPQ6XZF7 1577 aa31.11■■■□□ 2.57
NECTIN1-202ENST00000340882 ABCC8Q09428 1581 aa31.08■■■□□ 2.57
NECTIN1-202ENST00000340882 TRHP20396 242 aaPredicted RBP31.06■■■□□ 2.56
NECTIN1-202ENST00000340882 FBLN2P98095 1184 aa30.98■■■□□ 2.55
NECTIN1-202ENST00000340882 POLA1P09884 1462 aaPredicted RBP30.95■■■□□ 2.54
NECTIN1-202ENST00000340882 RAD54L2Q9Y4B4 1467 aa30.89■■■□□ 2.53
NECTIN1-202ENST00000340882 TDRD9Q8NDG6 1382 aaKnown RBP30.82■■■□□ 2.52
NECTIN1-202ENST00000340882 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
NECTIN1-202ENST00000340882 SNAPC4Q5SXM2 1469 aa30.76■■■□□ 2.52
NECTIN1-202ENST00000340882 SOGA1O94964 1423 aa30.76■■■□□ 2.51
NECTIN1-202ENST00000340882 FGD5Q6ZNL6 1462 aa30.66■■■□□ 2.5
NECTIN1-202ENST00000340882 SYNJ1O43426 1573 aa30.64■■■□□ 2.5
NECTIN1-202ENST00000340882 CHMP7Q8WUX9 453 aaPredicted RBP30.62■■■□□ 2.49
NECTIN1-202ENST00000340882 WDR97A6NE52 1622 aa30.62■■■□□ 2.49
NECTIN1-202ENST00000340882 MAGI1Q96QZ7 1491 aaPredicted RBP30.59■■■□□ 2.49
NECTIN1-202ENST00000340882 CUX1P39880 1505 aa30.57■■■□□ 2.49
NECTIN1-202ENST00000340882 AEBP2Q6ZN18 517 aaPredicted RBP30.55■■■□□ 2.48
NECTIN1-202ENST00000340882 GRIN2BQ13224 1484 aa30.54■■■□□ 2.48
NECTIN1-202ENST00000340882 SYNJ2O15056 1496 aa30.52■■■□□ 2.48
NECTIN1-202ENST00000340882 PBRM1Q86U86 1689 aa30.49■■■□□ 2.47
NECTIN1-202ENST00000340882 GAPVD1Q14C86 1478 aa30.45■■■□□ 2.47
NECTIN1-202ENST00000340882 ERCC6L2Q5T890 1561 aa30.35■■■□□ 2.45
NECTIN1-202ENST00000340882 ABCA5Q8WWZ7 1642 aa30.31■■■□□ 2.44
NECTIN1-202ENST00000340882 ABCA10Q8WWZ4 1543 aa30.25■■■□□ 2.43
NECTIN1-202ENST00000340882 GRIN2AQ12879 1464 aa30.18■■■□□ 2.42
NECTIN1-202ENST00000340882 CEP170Q5SW79 1584 aa30.16■■■□□ 2.42
NECTIN1-202ENST00000340882 ADAMTS12P58397 1594 aa30.11■■■□□ 2.41
NECTIN1-202ENST00000340882 NUP160Q12769 1436 aa30.1■■■□□ 2.41
NECTIN1-202ENST00000340882 KIF13AQ9H1H9 1805 aa30.1■■■□□ 2.41
NECTIN1-202ENST00000340882 SHROOM2Q13796 1616 aa30.08■■■□□ 2.41
NECTIN1-202ENST00000340882 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
NECTIN1-202ENST00000340882 FHAD1B1AJZ9 1412 aa29.94■■■□□ 2.38
NECTIN1-202ENST00000340882 BIVM-ERCC5R4GMW8 1640 aa29.91■■■□□ 2.38
NECTIN1-202ENST00000340882 TOP2BQ02880 1626 aa29.88■■■□□ 2.37
NECTIN1-202ENST00000340882 PRG4Q92954 1404 aaPredicted RBP29.86■■■□□ 2.37
NECTIN1-202ENST00000340882 ERICH3Q5RHP9 1530 aa29.84■■■□□ 2.37
NECTIN1-202ENST00000340882 JPH4Q96JJ6 628 aa29.77■■■□□ 2.36
NECTIN1-202ENST00000340882 FAM69CQ0P6D2 419 aa29.74■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms