Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PFDN1O60925 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.12□□□□□ -0.15
PFDN1O60925 AC034268.1-201ENST00000441047 882 ntBASIC14.12□□□□□ -0.15
PFDN1O60925 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC14.12□□□□□ -0.15
PFDN1O60925 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC14.12□□□□□ -0.15
PFDN1O60925 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC14.12□□□□□ -0.15
PFDN1O60925 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.12□□□□□ -0.15
PFDN1O60925 AC008687.6-201ENST00000596318 630 ntBASIC14.12□□□□□ -0.15
PFDN1O60925 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
PFDN1O60925 MAZ-216ENST00000616501 991 ntTSL 5 BASIC14.12□□□□□ -0.15
PFDN1O60925 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 SNX12-202ENST00000374274 2376 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.12□□□□□ -0.15
PFDN1O60925 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 AC020658.7-201ENST00000624274 2442 ntBASIC14.12□□□□□ -0.15
PFDN1O60925 IFT81-201ENST00000242591 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.12□□□□□ -0.15
PFDN1O60925 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.12□□□□□ -0.15
PFDN1O60925 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC14.12□□□□□ -0.15
PFDN1O60925 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
PFDN1O60925 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
PFDN1O60925 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
PFDN1O60925 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC14.11□□□□□ -0.15
PFDN1O60925 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 USP40-201ENST00000251722 5692 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
PFDN1O60925 BUB3-202ENST00000368859 667 ntTSL 3 BASIC14.11□□□□□ -0.15
PFDN1O60925 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.11□□□□□ -0.15
PFDN1O60925 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.11□□□□□ -0.15
PFDN1O60925 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.11□□□□□ -0.15
PFDN1O60925 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.11□□□□□ -0.15
PFDN1O60925 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 PNMA6B-201ENST00000538162 1200 ntBASIC14.11□□□□□ -0.15
PFDN1O60925 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
PFDN1O60925 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 AL445675.2-201ENST00000620291 557 ntBASIC14.11□□□□□ -0.15
PFDN1O60925 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 HLA-B-256ENST00000639848 1089 ntBASIC14.11□□□□□ -0.15
PFDN1O60925 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
PFDN1O60925 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
PFDN1O60925 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
PFDN1O60925 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
PFDN1O60925 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.1□□□□□ -0.15
PFDN1O60925 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.1□□□□□ -0.15
PFDN1O60925 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.1□□□□□ -0.15
PFDN1O60925 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
PFDN1O60925 PRKAR2A-202ENST00000296446 3318 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
PFDN1O60925 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms