RNA–Protein interactions for RNA: ENST00000373668.7

COL16A1-202, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 2 BASIC

Gene COL16A1, Length 3,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-202ENST00000373668 NISCHQ9Y2I1 1504 aa27.86■■■□□ 2.05
COL16A1-202ENST00000373668 DCAF8L2P0C7V8 631 aa25.83■■□□□ 1.73
COL16A1-202ENST00000373668 SHROOM4Q9ULL8 1493 aa25■■□□□ 1.59
COL16A1-202ENST00000373668 SUPT5HO00267 1087 aaKnown RBP24.44■■□□□ 1.5
COL16A1-202ENST00000373668 ABCC9O60706 1549 aa23.84■■□□□ 1.41
COL16A1-202ENST00000373668 EHMT2Q96KQ7 1210 aa23.28■■□□□ 1.32
COL16A1-202ENST00000373668 CCDC180Q9P1Z9 1646 aa23.24■■□□□ 1.31
COL16A1-202ENST00000373668 PABPN1Q86U42 306 aaKnown RBP eCLIP23.22■■□□□ 1.31
COL16A1-202ENST00000373668 ZCCHC6Q5VYS8 1495 aaKnown RBP23.2■■□□□ 1.3
COL16A1-202ENST00000373668 FAM9AQ8IZU1 332 aaPredicted RBP22.9■■□□□ 1.26
COL16A1-202ENST00000373668 SCRIBQ14160 1630 aa22.83■■□□□ 1.24
COL16A1-202ENST00000373668 CHIC1Q5VXU3 224 aa22.51■■□□□ 1.19
COL16A1-202ENST00000373668 TRIM41Q8WV44 630 aa22.47■■□□□ 1.19
COL16A1-202ENST00000373668 PCGF6Q9BYE7 350 aa22.42■■□□□ 1.18
COL16A1-202ENST00000373668 LOC105371045A0A1W2PR82 267 aa22.39■■□□□ 1.17
COL16A1-202ENST00000373668 HRCP23327 699 aa22.29■■□□□ 1.16
COL16A1-202ENST00000373668 RANGAP1P46060 587 aaPredicted RBP22.27■■□□□ 1.16
COL16A1-202ENST00000373668 CECR2Q9BXF3 1484 aa22.23■■□□□ 1.15
COL16A1-202ENST00000373668 TTBK1Q5TCY1 1321 aaPredicted RBP22.21■■□□□ 1.15
COL16A1-202ENST00000373668 RB1CC1Q8TDY2 1594 aa22.18■■□□□ 1.14
COL16A1-202ENST00000373668 NACADO15069 1562 aa22.16■■□□□ 1.14
COL16A1-202ENST00000373668 DCAF1Q9Y4B6 1507 aa22.15■■□□□ 1.14
COL16A1-202ENST00000373668 RSF1Q96T23 1441 aaPredicted RBP22.08■■□□□ 1.13
COL16A1-202ENST00000373668 PPARGC1BQ86YN6 1023 aaKnown RBP22.08■■□□□ 1.13
COL16A1-202ENST00000373668 MROH2BQ7Z745 1585 aa21.84■■□□□ 1.09
COL16A1-202ENST00000373668 UBTFP17480 764 aaKnown RBP21.83■■□□□ 1.09
COL16A1-202ENST00000373668 MYO15BQ96JP2 1530 aa21.78■■□□□ 1.08
COL16A1-202ENST00000373668 WIZO95785 1651 aa21.6■■□□□ 1.05
COL16A1-202ENST00000373668 TRIM26Q12899 539 aaPredicted RBP21.52■■□□□ 1.03
COL16A1-202ENST00000373668 ATP1B4Q9UN42 357 aaPredicted RBP21.5■■□□□ 1.03
COL16A1-202ENST00000373668 BAZ1AQ9NRL2 1556 aaPredicted RBP21.48■■□□□ 1.03
COL16A1-202ENST00000373668 BAZ1BQ9UIG0 1483 aaKnown RBP21.36■■□□□ 1.01
COL16A1-202ENST00000373668 CCDC88BA6NC98 1476 aa21.34■■□□□ 1.01
COL16A1-202ENST00000373668 APLP2Q06481 763 aa21.31■■□□□ 1
COL16A1-202ENST00000373668 DNAJC5BQ9UF47 199 aa21.3■■□□□ 1
COL16A1-202ENST00000373668 ZEB1P37275 1124 aaPredicted RBP21.27■■□□□ 1
COL16A1-202ENST00000373668 CSRNP3Q8WYN3 585 aa21.25■□□□□ 0.99
COL16A1-202ENST00000373668 ABCC8Q09428 1581 aa21.24■□□□□ 0.99
COL16A1-202ENST00000373668 BICRAQ9NZM4 1560 aa21.23■□□□□ 0.99
COL16A1-202ENST00000373668 SMARCA4P51532 1647 aa21.23■□□□□ 0.99
COL16A1-202ENST00000373668 ATAD2BQ9ULI0 1458 aa21.18■□□□□ 0.98
COL16A1-202ENST00000373668 P3H3Q8IVL6 736 aa21.16■□□□□ 0.98
COL16A1-202ENST00000373668 UNC13AQ9UPW8 1703 aa21.14■□□□□ 0.98
COL16A1-202ENST00000373668 PELP1Q8IZL8 1130 aaKnown RBP21.1■□□□□ 0.97
COL16A1-202ENST00000373668 SOGA1O94964 1423 aa21.08■□□□□ 0.97
COL16A1-202ENST00000373668 FBLN2P98095 1184 aa21.06■□□□□ 0.96
COL16A1-202ENST00000373668 ITGAEP38570 1179 aa21.05■□□□□ 0.96
COL16A1-202ENST00000373668 WRNQ14191 1432 aaPredicted RBP eCLIP21.04■□□□□ 0.96
COL16A1-202ENST00000373668 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.95
COL16A1-202ENST00000373668 ARID3CA6NKF2 412 aa21.01■□□□□ 0.95
COL16A1-202ENST00000373668 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
COL16A1-202ENST00000373668 CCER1Q8TC90 406 aaPredicted RBP20.97■□□□□ 0.95
COL16A1-202ENST00000373668 EIF4G1Q04637 1599 aaKnown RBP20.95■□□□□ 0.94
COL16A1-202ENST00000373668 RUSC2Q8N2Y8 1516 aa20.93■□□□□ 0.94
COL16A1-202ENST00000373668 SMARCA2P51531 1590 aa20.91■□□□□ 0.94
COL16A1-202ENST00000373668 SCAF1Q9H7N4 1312 aaKnown RBP20.89■□□□□ 0.93
COL16A1-202ENST00000373668 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
COL16A1-202ENST00000373668 NESP48681 1621 aa20.73■□□□□ 0.91
COL16A1-202ENST00000373668 CADPSQ9ULU8 1353 aa20.71■□□□□ 0.91
COL16A1-202ENST00000373668 CENPBP07199 599 aaPredicted RBP20.71■□□□□ 0.91
COL16A1-202ENST00000373668 CC2D2AQ9P2K1 1620 aa20.7■□□□□ 0.9
COL16A1-202ENST00000373668 NCAPD3P42695 1498 aa20.7■□□□□ 0.9
COL16A1-202ENST00000373668 TDRD9Q8NDG6 1382 aaKnown RBP20.66■□□□□ 0.9
COL16A1-202ENST00000373668 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
COL16A1-202ENST00000373668 DIEXFQ68CQ4 756 aaKnown RBP20.61■□□□□ 0.89
COL16A1-202ENST00000373668 CEP162Q5TB80 1403 aa20.61■□□□□ 0.89
COL16A1-202ENST00000373668 CUX2O14529 1486 aa20.6■□□□□ 0.89
COL16A1-202ENST00000373668 ACIN1Q9UKV3 1341 aaKnown RBP20.59■□□□□ 0.89
COL16A1-202ENST00000373668 GTF3C3Q9Y5Q9 886 aa20.59■□□□□ 0.89
COL16A1-202ENST00000373668 NEUROD1Q13562 356 aa20.57■□□□□ 0.88
COL16A1-202ENST00000373668 FAM50AQ14320 339 aaKnown RBP20.57■□□□□ 0.88
COL16A1-202ENST00000373668 CLIP1P30622 1438 aa20.53■□□□□ 0.88
COL16A1-202ENST00000373668 KIF27Q86VH2 1401 aa20.52■□□□□ 0.87
COL16A1-202ENST00000373668 ERCC6Q03468 1493 aa20.51■□□□□ 0.87
COL16A1-202ENST00000373668 FANCD2Q9BXW9 1451 aa20.49■□□□□ 0.87
COL16A1-202ENST00000373668 RAD54L2Q9Y4B4 1467 aa20.47■□□□□ 0.87
COL16A1-202ENST00000373668 GOLGA3Q08378 1498 aa20.46■□□□□ 0.87
COL16A1-202ENST00000373668 SYNJ1O43426 1573 aa20.46■□□□□ 0.87
COL16A1-202ENST00000373668 RAPGEF2Q9Y4G8 1499 aa20.46■□□□□ 0.87
COL16A1-202ENST00000373668 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
COL16A1-202ENST00000373668 TNIKQ9UKE5 1360 aa20.42■□□□□ 0.86
COL16A1-202ENST00000373668 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
COL16A1-202ENST00000373668 CFTRP13569 1480 aa20.38■□□□□ 0.85
COL16A1-202ENST00000373668 PDS5BQ9NTI5 1447 aa20.37■□□□□ 0.85
COL16A1-202ENST00000373668 CEP164Q9UPV0 1460 aa20.37■□□□□ 0.85
COL16A1-202ENST00000373668 EEA1Q15075 1411 aa20.36■□□□□ 0.85
COL16A1-202ENST00000373668 KANK4Q5T7N3 995 aaPredicted RBP20.34■□□□□ 0.85
COL16A1-202ENST00000373668 FGD5Q6ZNL6 1462 aa20.32■□□□□ 0.84
COL16A1-202ENST00000373668 HMGXB3Q12766 1538 aa20.3■□□□□ 0.84
COL16A1-202ENST00000373668 PEG3Q9GZU2 1588 aa20.29■□□□□ 0.84
COL16A1-202ENST00000373668 CUX1P39880 1505 aa20.28■□□□□ 0.84
COL16A1-202ENST00000373668 MYT1Q01538 1121 aa20.28■□□□□ 0.84
COL16A1-202ENST00000373668 ZNF777Q9ULD5 760 aaPredicted RBP20.26■□□□□ 0.83
COL16A1-202ENST00000373668 IGF1RP08069 1367 aa20.25■□□□□ 0.83
COL16A1-202ENST00000373668 AQRO60306 1485 aaKnown RBP eCLIP20.22■□□□□ 0.83
COL16A1-202ENST00000373668 CHIC2Q9UKJ5 165 aa20.22■□□□□ 0.83
COL16A1-202ENST00000373668 ZNF316A6NFI3 1004 aaPredicted RBP20.2■□□□□ 0.82
COL16A1-202ENST00000373668 MYT1LQ9UL68 1186 aa20.19■□□□□ 0.82
COL16A1-202ENST00000373668 TRIM52Q96A61 297 aa20.09■□□□□ 0.81
COL16A1-202ENST00000373668 FHOD3Q2V2M9 1422 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms