RNA–Protein interactions for RNA: ENST00000523939.1

ALKAL1-202, Transcript of ALK and LTK ligand 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ALKAL1, Length 536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALKAL1-202ENST00000523939 NISCHQ9Y2I1 1504 aa46.67■■■■■ 5.06
ALKAL1-202ENST00000523939 CCDC180Q9P1Z9 1646 aa41.32■■■■■ 4.2
ALKAL1-202ENST00000523939 ABCC9O60706 1549 aa40.02■■■■■ 4
ALKAL1-202ENST00000523939 ZCCHC6Q5VYS8 1495 aaKnown RBP38.95■■■■□ 3.83
ALKAL1-202ENST00000523939 NACADO15069 1562 aa38.77■■■■□ 3.8
ALKAL1-202ENST00000523939 MYO15BQ96JP2 1530 aa38.75■■■■□ 3.79
ALKAL1-202ENST00000523939 DCAF1Q9Y4B6 1507 aa38.69■■■■□ 3.78
ALKAL1-202ENST00000523939 RB1CC1Q8TDY2 1594 aa38.68■■■■□ 3.78
ALKAL1-202ENST00000523939 DCAF8L2P0C7V8 631 aa38.61■■■■□ 3.77
ALKAL1-202ENST00000523939 UNC13AQ9UPW8 1703 aa37.84■■■■□ 3.65
ALKAL1-202ENST00000523939 SCRIBQ14160 1630 aa37.63■■■■□ 3.61
ALKAL1-202ENST00000523939 BICRAQ9NZM4 1560 aa37.62■■■■□ 3.61
ALKAL1-202ENST00000523939 PABPN1Q86U42 306 aaKnown RBP eCLIP37.46■■■■□ 3.59
ALKAL1-202ENST00000523939 SHROOM4Q9ULL8 1493 aa37.22■■■■□ 3.55
ALKAL1-202ENST00000523939 DNAJC5BQ9UF47 199 aa36.58■■■■□ 3.45
ALKAL1-202ENST00000523939 EIF4G1Q04637 1599 aaKnown RBP36.52■■■■□ 3.44
ALKAL1-202ENST00000523939 CECR2Q9BXF3 1484 aa36.31■■■■□ 3.4
ALKAL1-202ENST00000523939 CC2D2AQ9P2K1 1620 aa36.27■■■■□ 3.4
ALKAL1-202ENST00000523939 SMARCA4P51532 1647 aa36.11■■■■□ 3.37
ALKAL1-202ENST00000523939 BAZ1AQ9NRL2 1556 aaPredicted RBP36.1■■■■□ 3.37
ALKAL1-202ENST00000523939 MROH2BQ7Z745 1585 aa35.96■■■■□ 3.35
ALKAL1-202ENST00000523939 ATAD2BQ9ULI0 1458 aa35.86■■■■□ 3.33
ALKAL1-202ENST00000523939 PEG3Q9GZU2 1588 aa35.85■■■■□ 3.33
ALKAL1-202ENST00000523939 NCAPD3P42695 1498 aa35.83■■■■□ 3.33
ALKAL1-202ENST00000523939 SMARCA2P51531 1590 aa35.77■■■■□ 3.32
ALKAL1-202ENST00000523939 RSF1Q96T23 1441 aaPredicted RBP35.69■■■■□ 3.3
ALKAL1-202ENST00000523939 HMGXB3Q12766 1538 aa35.63■■■■□ 3.29
ALKAL1-202ENST00000523939 WIZO95785 1651 aa35.55■■■■□ 3.28
ALKAL1-202ENST00000523939 BAZ1BQ9UIG0 1483 aaKnown RBP35.49■■■■□ 3.27
ALKAL1-202ENST00000523939 TOP2AP11388 1531 aaKnown RBP35.21■■■■□ 3.23
ALKAL1-202ENST00000523939 SUPT5HO00267 1087 aaKnown RBP34.84■■■■□ 3.17
ALKAL1-202ENST00000523939 CCDC88BA6NC98 1476 aa34.82■■■■□ 3.16
ALKAL1-202ENST00000523939 NESP48681 1621 aa34.79■■■■□ 3.16
ALKAL1-202ENST00000523939 LAMC3Q9Y6N6 1575 aa34.75■■■■□ 3.15
ALKAL1-202ENST00000523939 CADPSQ9ULU8 1353 aa34.74■■■■□ 3.15
ALKAL1-202ENST00000523939 CFTRP13569 1480 aa34.65■■■■□ 3.14
ALKAL1-202ENST00000523939 PDS5BQ9NTI5 1447 aa34.47■■■■□ 3.11
ALKAL1-202ENST00000523939 ERCC6Q03468 1493 aa34.39■■■■□ 3.1
ALKAL1-202ENST00000523939 KIF21AQ7Z4S6 1674 aa34.35■■■■□ 3.09
ALKAL1-202ENST00000523939 PRDM2Q13029 1718 aa34.33■■■■□ 3.09
ALKAL1-202ENST00000523939 FANCD2Q9BXW9 1451 aa34.31■■■■□ 3.08
ALKAL1-202ENST00000523939 THOC2Q8NI27 1593 aaKnown RBP34.22■■■■□ 3.07
ALKAL1-202ENST00000523939 CEP164Q9UPV0 1460 aa34.2■■■■□ 3.06
ALKAL1-202ENST00000523939 MRC2Q9UBG0 1479 aa34.11■■■■□ 3.05
ALKAL1-202ENST00000523939 CUX2O14529 1486 aa34.05■■■■□ 3.04
ALKAL1-202ENST00000523939 WDR62O43379 1518 aa34.04■■■■□ 3.04
ALKAL1-202ENST00000523939 URB2Q14146 1524 aaKnown RBP33.99■■■■□ 3.03
ALKAL1-202ENST00000523939 ABCC8Q09428 1581 aa33.83■■■■□ 3.01
ALKAL1-202ENST00000523939 TOPBP1Q92547 1522 aa33.82■■■■□ 3
ALKAL1-202ENST00000523939 DNMBPQ6XZF7 1577 aa33.8■■■■□ 3
ALKAL1-202ENST00000523939 CUX1P39880 1505 aa33.7■■■□□ 2.99
ALKAL1-202ENST00000523939 POLA1P09884 1462 aaPredicted RBP33.56■■■□□ 2.96
ALKAL1-202ENST00000523939 WRNQ14191 1432 aaPredicted RBP eCLIP33.56■■■□□ 2.96
ALKAL1-202ENST00000523939 IFT140Q96RY7 1462 aa33.51■■■□□ 2.96
ALKAL1-202ENST00000523939 SYNJ1O43426 1573 aa33.5■■■□□ 2.95
ALKAL1-202ENST00000523939 FGD5Q6ZNL6 1462 aa33.5■■■□□ 2.95
ALKAL1-202ENST00000523939 TOP2BQ02880 1626 aa33.5■■■□□ 2.95
ALKAL1-202ENST00000523939 BIVM-ERCC5R4GMW8 1640 aa33.5■■■□□ 2.95
ALKAL1-202ENST00000523939 TARBP1Q13395 1621 aaKnown RBP33.47■■■□□ 2.95
ALKAL1-202ENST00000523939 SOGA1O94964 1423 aa33.4■■■□□ 2.94
ALKAL1-202ENST00000523939 RAD54L2Q9Y4B4 1467 aa33.39■■■□□ 2.94
ALKAL1-202ENST00000523939 ZNF608Q9ULD9 1512 aaPredicted RBP33.35■■■□□ 2.93
ALKAL1-202ENST00000523939 WDR97A6NE52 1622 aa33.25■■■□□ 2.91
ALKAL1-202ENST00000523939 ABCA10Q8WWZ4 1543 aa33.24■■■□□ 2.91
ALKAL1-202ENST00000523939 EIF4G3O43432 1585 aaKnown RBP33.2■■■□□ 2.91
ALKAL1-202ENST00000523939 AQRO60306 1485 aaKnown RBP eCLIP33.18■■■□□ 2.9
ALKAL1-202ENST00000523939 TDRD9Q8NDG6 1382 aaKnown RBP33.16■■■□□ 2.9
ALKAL1-202ENST00000523939 ABCA5Q8WWZ7 1642 aa33.07■■■□□ 2.88
ALKAL1-202ENST00000523939 GAPVD1Q14C86 1478 aa33.01■■■□□ 2.88
ALKAL1-202ENST00000523939 GRIN2BQ13224 1484 aa32.97■■■□□ 2.87
ALKAL1-202ENST00000523939 TRIM41Q8WV44 630 aa32.93■■■□□ 2.86
ALKAL1-202ENST00000523939 PBRM1Q86U86 1689 aa32.9■■■□□ 2.86
ALKAL1-202ENST00000523939 SNAPC4Q5SXM2 1469 aa32.86■■■□□ 2.85
ALKAL1-202ENST00000523939 MAGI1Q96QZ7 1491 aaPredicted RBP32.86■■■□□ 2.85
ALKAL1-202ENST00000523939 CHIC1Q5VXU3 224 aa32.85■■■□□ 2.85
ALKAL1-202ENST00000523939 ERICH3Q5RHP9 1530 aa32.83■■■□□ 2.85
ALKAL1-202ENST00000523939 KIF27Q86VH2 1401 aa32.82■■■□□ 2.84
ALKAL1-202ENST00000523939 IGF1RP08069 1367 aa32.75■■■□□ 2.83
ALKAL1-202ENST00000523939 SYNJ2O15056 1496 aa32.74■■■□□ 2.83
ALKAL1-202ENST00000523939 RUSC2Q8N2Y8 1516 aa32.7■■■□□ 2.83
ALKAL1-202ENST00000523939 ADAMTS12P58397 1594 aa32.69■■■□□ 2.82
ALKAL1-202ENST00000523939 CHD1O14646 1710 aa32.68■■■□□ 2.82
ALKAL1-202ENST00000523939 FHAD1B1AJZ9 1412 aa32.67■■■□□ 2.82
ALKAL1-202ENST00000523939 OSCARQ8IYS5 282 aa32.66■■■□□ 2.82
ALKAL1-202ENST00000523939 DNAJC5Q9H3Z4 198 aa32.65■■■□□ 2.82
ALKAL1-202ENST00000523939 CHMP7Q8WUX9 453 aaPredicted RBP32.6■■■□□ 2.81
ALKAL1-202ENST00000523939 FBLN2P98095 1184 aa32.57■■■□□ 2.8
ALKAL1-202ENST00000523939 CUL7Q14999 1698 aa32.56■■■□□ 2.8
ALKAL1-202ENST00000523939 GRIN2AQ12879 1464 aa32.55■■■□□ 2.8
ALKAL1-202ENST00000523939 CARMIL1Q5VZK9 1371 aa32.48■■■□□ 2.79
ALKAL1-202ENST00000523939 NUP160Q12769 1436 aa32.45■■■□□ 2.79
ALKAL1-202ENST00000523939 CLASP1Q7Z460 1538 aa32.44■■■□□ 2.78
ALKAL1-202ENST00000523939 EEA1Q15075 1411 aa32.43■■■□□ 2.78
ALKAL1-202ENST00000523939 CEP170Q5SW79 1584 aa32.4■■■□□ 2.78
ALKAL1-202ENST00000523939 PRXQ9BXM0 1461 aa32.37■■■□□ 2.77
ALKAL1-202ENST00000523939 CSRNP3Q8WYN3 585 aa32.35■■■□□ 2.77
ALKAL1-202ENST00000523939 RAPGEF2Q9Y4G8 1499 aa32.32■■■□□ 2.76
ALKAL1-202ENST00000523939 KIAA0586Q9BVV6 1533 aa32.2■■■□□ 2.74
ALKAL1-202ENST00000523939 SHROOM2Q13796 1616 aa32.18■■■□□ 2.74
ALKAL1-202ENST00000523939 FAM9AQ8IZU1 332 aaPredicted RBP32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms