RNA–Protein interactions for RNA: ENST00000538162.3

PNMA6B-201, Transcript of PNMA family member 6B (pseudogene), humanhuman

BASIC

Gene PNMA6B, Length 1,200 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNMA6B-201ENST00000538162 NISCHQ9Y2I1 1504 aa49.29■■■■■ 5.48
PNMA6B-201ENST00000538162 CCDC180Q9P1Z9 1646 aa43.96■■■■■ 4.63
PNMA6B-201ENST00000538162 ABCC9O60706 1549 aa43.09■■■■■ 4.49
PNMA6B-201ENST00000538162 RB1CC1Q8TDY2 1594 aa41.42■■■■■ 4.22
PNMA6B-201ENST00000538162 NACADO15069 1562 aa41.32■■■■■ 4.2
PNMA6B-201ENST00000538162 DCAF8L2P0C7V8 631 aa41.19■■■■■ 4.18
PNMA6B-201ENST00000538162 ZCCHC6Q5VYS8 1495 aaKnown RBP41.03■■■■■ 4.16
PNMA6B-201ENST00000538162 MYO15BQ96JP2 1530 aa41■■■■■ 4.15
PNMA6B-201ENST00000538162 DCAF1Q9Y4B6 1507 aa40.78■■■■■ 4.12
PNMA6B-201ENST00000538162 UNC13AQ9UPW8 1703 aa40.56■■■■■ 4.08
PNMA6B-201ENST00000538162 PABPN1Q86U42 306 aaKnown RBP eCLIP40.19■■■■■ 4.02
PNMA6B-201ENST00000538162 BICRAQ9NZM4 1560 aa40.17■■■■■ 4.02
PNMA6B-201ENST00000538162 SCRIBQ14160 1630 aa40.07■■■■■ 4.01
PNMA6B-201ENST00000538162 SHROOM4Q9ULL8 1493 aa39.72■■■■□ 3.95
PNMA6B-201ENST00000538162 DNAJC5BQ9UF47 199 aa39.63■■■■□ 3.93
PNMA6B-201ENST00000538162 EIF4G1Q04637 1599 aaKnown RBP39.12■■■■□ 3.85
PNMA6B-201ENST00000538162 CC2D2AQ9P2K1 1620 aa39■■■■□ 3.83
PNMA6B-201ENST00000538162 CECR2Q9BXF3 1484 aa38.73■■■■□ 3.79
PNMA6B-201ENST00000538162 SMARCA4P51532 1647 aa38.32■■■■□ 3.73
PNMA6B-201ENST00000538162 BAZ1AQ9NRL2 1556 aaPredicted RBP38.23■■■■□ 3.71
PNMA6B-201ENST00000538162 NCAPD3P42695 1498 aa38.09■■■■□ 3.69
PNMA6B-201ENST00000538162 ATAD2BQ9ULI0 1458 aa38.09■■■■□ 3.69
PNMA6B-201ENST00000538162 SMARCA2P51531 1590 aa38.07■■■■□ 3.69
PNMA6B-201ENST00000538162 MROH2BQ7Z745 1585 aa37.98■■■■□ 3.67
PNMA6B-201ENST00000538162 HMGXB3Q12766 1538 aa37.93■■■■□ 3.66
PNMA6B-201ENST00000538162 PEG3Q9GZU2 1588 aa37.93■■■■□ 3.66
PNMA6B-201ENST00000538162 BAZ1BQ9UIG0 1483 aaKnown RBP37.79■■■■□ 3.64
PNMA6B-201ENST00000538162 WIZO95785 1651 aa37.61■■■■□ 3.61
PNMA6B-201ENST00000538162 RSF1Q96T23 1441 aaPredicted RBP37.46■■■■□ 3.59
PNMA6B-201ENST00000538162 NESP48681 1621 aa37.25■■■■□ 3.55
PNMA6B-201ENST00000538162 TOP2AP11388 1531 aaKnown RBP37.19■■■■□ 3.54
PNMA6B-201ENST00000538162 LAMC3Q9Y6N6 1575 aa37.16■■■■□ 3.54
PNMA6B-201ENST00000538162 ERCC6Q03468 1493 aa37.15■■■■□ 3.54
PNMA6B-201ENST00000538162 CADPSQ9ULU8 1353 aa36.96■■■■□ 3.51
PNMA6B-201ENST00000538162 KIF21AQ7Z4S6 1674 aa36.87■■■■□ 3.49
PNMA6B-201ENST00000538162 PDS5BQ9NTI5 1447 aa36.86■■■■□ 3.49
PNMA6B-201ENST00000538162 CUX2O14529 1486 aa36.82■■■■□ 3.49
PNMA6B-201ENST00000538162 THOC2Q8NI27 1593 aaKnown RBP36.76■■■■□ 3.48
PNMA6B-201ENST00000538162 CFTRP13569 1480 aa36.73■■■■□ 3.47
PNMA6B-201ENST00000538162 CCDC88BA6NC98 1476 aa36.71■■■■□ 3.47
PNMA6B-201ENST00000538162 PRDM2Q13029 1718 aa36.57■■■■□ 3.45
PNMA6B-201ENST00000538162 FANCD2Q9BXW9 1451 aa36.56■■■■□ 3.44
PNMA6B-201ENST00000538162 CEP164Q9UPV0 1460 aa36.55■■■■□ 3.44
PNMA6B-201ENST00000538162 MRC2Q9UBG0 1479 aa36.52■■■■□ 3.44
PNMA6B-201ENST00000538162 WDR62O43379 1518 aa36.43■■■■□ 3.42
PNMA6B-201ENST00000538162 SUPT5HO00267 1087 aaKnown RBP36.38■■■■□ 3.41
PNMA6B-201ENST00000538162 URB2Q14146 1524 aaKnown RBP36.22■■■■□ 3.39
PNMA6B-201ENST00000538162 TOPBP1Q92547 1522 aa35.98■■■■□ 3.35
PNMA6B-201ENST00000538162 ABCC8Q09428 1581 aa35.95■■■■□ 3.35
PNMA6B-201ENST00000538162 DNMBPQ6XZF7 1577 aa35.94■■■■□ 3.34
PNMA6B-201ENST00000538162 DNAJC5Q9H3Z4 198 aa35.81■■■■□ 3.32
PNMA6B-201ENST00000538162 IFT140Q96RY7 1462 aa35.78■■■■□ 3.32
PNMA6B-201ENST00000538162 POLA1P09884 1462 aaPredicted RBP35.66■■■■□ 3.3
PNMA6B-201ENST00000538162 CUX1P39880 1505 aa35.65■■■■□ 3.3
PNMA6B-201ENST00000538162 ZNF608Q9ULD9 1512 aaPredicted RBP35.62■■■■□ 3.29
PNMA6B-201ENST00000538162 TARBP1Q13395 1621 aaKnown RBP35.62■■■■□ 3.29
PNMA6B-201ENST00000538162 FGD5Q6ZNL6 1462 aa35.55■■■■□ 3.28
PNMA6B-201ENST00000538162 EIF4G3O43432 1585 aaKnown RBP35.54■■■■□ 3.28
PNMA6B-201ENST00000538162 RAD54L2Q9Y4B4 1467 aa35.49■■■■□ 3.27
PNMA6B-201ENST00000538162 SOGA1O94964 1423 aa35.49■■■■□ 3.27
PNMA6B-201ENST00000538162 AQRO60306 1485 aaKnown RBP eCLIP35.4■■■■□ 3.26
PNMA6B-201ENST00000538162 BIVM-ERCC5R4GMW8 1640 aa35.35■■■■□ 3.25
PNMA6B-201ENST00000538162 WRNQ14191 1432 aaPredicted RBP eCLIP35.34■■■■□ 3.25
PNMA6B-201ENST00000538162 WDR97A6NE52 1622 aa35.34■■■■□ 3.25
PNMA6B-201ENST00000538162 TOP2BQ02880 1626 aa35.32■■■■□ 3.25
PNMA6B-201ENST00000538162 SYNJ1O43426 1573 aa35.31■■■■□ 3.24
PNMA6B-201ENST00000538162 TDRD9Q8NDG6 1382 aaKnown RBP35.29■■■■□ 3.24
PNMA6B-201ENST00000538162 OSCARQ8IYS5 282 aa35.22■■■■□ 3.23
PNMA6B-201ENST00000538162 ABCA10Q8WWZ4 1543 aa35.2■■■■□ 3.23
PNMA6B-201ENST00000538162 CHD1O14646 1710 aa35.15■■■■□ 3.22
PNMA6B-201ENST00000538162 PBRM1Q86U86 1689 aa35.11■■■■□ 3.21
PNMA6B-201ENST00000538162 ABCA5Q8WWZ7 1642 aa35.11■■■■□ 3.21
PNMA6B-201ENST00000538162 GRIN2BQ13224 1484 aa35.1■■■■□ 3.21
PNMA6B-201ENST00000538162 GAPVD1Q14C86 1478 aa35.09■■■■□ 3.21
PNMA6B-201ENST00000538162 SNAPC4Q5SXM2 1469 aa35.09■■■■□ 3.21
PNMA6B-201ENST00000538162 MAGI1Q96QZ7 1491 aaPredicted RBP35.03■■■■□ 3.2
PNMA6B-201ENST00000538162 FBLN2P98095 1184 aa34.98■■■■□ 3.19
PNMA6B-201ENST00000538162 SYNJ2O15056 1496 aa34.9■■■■□ 3.18
PNMA6B-201ENST00000538162 CHMP7Q8WUX9 453 aaPredicted RBP34.86■■■■□ 3.17
PNMA6B-201ENST00000538162 ADAMTS12P58397 1594 aa34.79■■■■□ 3.16
PNMA6B-201ENST00000538162 ERICH3Q5RHP9 1530 aa34.78■■■■□ 3.16
PNMA6B-201ENST00000538162 RIMBP3CA6NJZ7 1639 aa34.76■■■■□ 3.15
PNMA6B-201ENST00000538162 RIMBP3BA6NNM3 1639 aa34.76■■■■□ 3.15
PNMA6B-201ENST00000538162 RIMBP3Q9UFD9 1639 aa34.76■■■■□ 3.15
PNMA6B-201ENST00000538162 CLASP1Q7Z460 1538 aa34.71■■■■□ 3.15
PNMA6B-201ENST00000538162 ARHGEF11O15085 1522 aa34.71■■■■□ 3.15
PNMA6B-201ENST00000538162 FHAD1B1AJZ9 1412 aa34.67■■■■□ 3.14
PNMA6B-201ENST00000538162 GRIN2AQ12879 1464 aa34.66■■■■□ 3.14
PNMA6B-201ENST00000538162 KIF27Q86VH2 1401 aa34.62■■■■□ 3.13
PNMA6B-201ENST00000538162 TRIM41Q8WV44 630 aa34.59■■■■□ 3.13
PNMA6B-201ENST00000538162 CEP170Q5SW79 1584 aa34.52■■■■□ 3.12
PNMA6B-201ENST00000538162 NUP160Q12769 1436 aa34.5■■■■□ 3.11
PNMA6B-201ENST00000538162 CUL7Q14999 1698 aa34.47■■■■□ 3.11
PNMA6B-201ENST00000538162 IGF1RP08069 1367 aa34.47■■■■□ 3.11
PNMA6B-201ENST00000538162 ARAP1Q96P48 1450 aa34.41■■■■□ 3.1
PNMA6B-201ENST00000538162 CYB5RLQ6IPT4 315 aa34.34■■■■□ 3.09
PNMA6B-201ENST00000538162 SHROOM2Q13796 1616 aa34.31■■■■□ 3.08
PNMA6B-201ENST00000538162 RUSC2Q8N2Y8 1516 aa34.28■■■■□ 3.08
PNMA6B-201ENST00000538162 CARMIL1Q5VZK9 1371 aa34.27■■■■□ 3.08
PNMA6B-201ENST00000538162 ERCC6L2Q5T890 1561 aa34.22■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 169.1 ms