RNA–Protein interactions for RNA: ENST00000369641.7

FAM3A-203, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5 BASIC

Gene FAM3A, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-203ENST00000369641 NISCHQ9Y2I1 1504 aa47.28■■■■■ 5.16
FAM3A-203ENST00000369641 CCDC180Q9P1Z9 1646 aa41.91■■■■■ 4.3
FAM3A-203ENST00000369641 ABCC9O60706 1549 aa40.86■■■■■ 4.13
FAM3A-203ENST00000369641 ZCCHC6Q5VYS8 1495 aaKnown RBP39.44■■■■□ 3.9
FAM3A-203ENST00000369641 DCAF8L2P0C7V8 631 aa39.36■■■■□ 3.89
FAM3A-203ENST00000369641 NACADO15069 1562 aa39.33■■■■□ 3.89
FAM3A-203ENST00000369641 RB1CC1Q8TDY2 1594 aa39.33■■■■□ 3.89
FAM3A-203ENST00000369641 MYO15BQ96JP2 1530 aa39.17■■■■□ 3.86
FAM3A-203ENST00000369641 DCAF1Q9Y4B6 1507 aa39.09■■■■□ 3.85
FAM3A-203ENST00000369641 UNC13AQ9UPW8 1703 aa38.57■■■■□ 3.77
FAM3A-203ENST00000369641 SCRIBQ14160 1630 aa38.31■■■■□ 3.72
FAM3A-203ENST00000369641 BICRAQ9NZM4 1560 aa38.25■■■■□ 3.71
FAM3A-203ENST00000369641 PABPN1Q86U42 306 aaKnown RBP eCLIP38.23■■■■□ 3.71
FAM3A-203ENST00000369641 SHROOM4Q9ULL8 1493 aa37.7■■■■□ 3.63
FAM3A-203ENST00000369641 DNAJC5BQ9UF47 199 aa37.41■■■■□ 3.58
FAM3A-203ENST00000369641 EIF4G1Q04637 1599 aaKnown RBP37.16■■■■□ 3.54
FAM3A-203ENST00000369641 CC2D2AQ9P2K1 1620 aa36.97■■■■□ 3.51
FAM3A-203ENST00000369641 CECR2Q9BXF3 1484 aa36.87■■■■□ 3.49
FAM3A-203ENST00000369641 SMARCA4P51532 1647 aa36.65■■■■□ 3.46
FAM3A-203ENST00000369641 BAZ1AQ9NRL2 1556 aaPredicted RBP36.59■■■■□ 3.45
FAM3A-203ENST00000369641 MROH2BQ7Z745 1585 aa36.49■■■■□ 3.43
FAM3A-203ENST00000369641 ATAD2BQ9ULI0 1458 aa36.39■■■■□ 3.42
FAM3A-203ENST00000369641 NCAPD3P42695 1498 aa36.33■■■■□ 3.41
FAM3A-203ENST00000369641 SMARCA2P51531 1590 aa36.3■■■■□ 3.4
FAM3A-203ENST00000369641 PEG3Q9GZU2 1588 aa36.28■■■■□ 3.4
FAM3A-203ENST00000369641 HMGXB3Q12766 1538 aa36.15■■■■□ 3.38
FAM3A-203ENST00000369641 WIZO95785 1651 aa36.12■■■■□ 3.37
FAM3A-203ENST00000369641 RSF1Q96T23 1441 aaPredicted RBP36.12■■■■□ 3.37
FAM3A-203ENST00000369641 BAZ1BQ9UIG0 1483 aaKnown RBP36.06■■■■□ 3.36
FAM3A-203ENST00000369641 TOP2AP11388 1531 aaKnown RBP35.69■■■■□ 3.3
FAM3A-203ENST00000369641 NESP48681 1621 aa35.46■■■■□ 3.27
FAM3A-203ENST00000369641 SUPT5HO00267 1087 aaKnown RBP35.32■■■■□ 3.24
FAM3A-203ENST00000369641 LAMC3Q9Y6N6 1575 aa35.31■■■■□ 3.24
FAM3A-203ENST00000369641 CCDC88BA6NC98 1476 aa35.29■■■■□ 3.24
FAM3A-203ENST00000369641 CADPSQ9ULU8 1353 aa35.26■■■■□ 3.24
FAM3A-203ENST00000369641 ERCC6Q03468 1493 aa35.12■■■■□ 3.21
FAM3A-203ENST00000369641 CFTRP13569 1480 aa35.12■■■■□ 3.21
FAM3A-203ENST00000369641 KIF21AQ7Z4S6 1674 aa35.04■■■■□ 3.2
FAM3A-203ENST00000369641 PDS5BQ9NTI5 1447 aa35.03■■■■□ 3.2
FAM3A-203ENST00000369641 PRDM2Q13029 1718 aa34.88■■■■□ 3.17
FAM3A-203ENST00000369641 THOC2Q8NI27 1593 aaKnown RBP34.87■■■■□ 3.17
FAM3A-203ENST00000369641 FANCD2Q9BXW9 1451 aa34.87■■■■□ 3.17
FAM3A-203ENST00000369641 CEP164Q9UPV0 1460 aa34.78■■■■□ 3.16
FAM3A-203ENST00000369641 MRC2Q9UBG0 1479 aa34.71■■■■□ 3.15
FAM3A-203ENST00000369641 CUX2O14529 1486 aa34.69■■■■□ 3.14
FAM3A-203ENST00000369641 WDR62O43379 1518 aa34.61■■■■□ 3.13
FAM3A-203ENST00000369641 URB2Q14146 1524 aaKnown RBP34.56■■■■□ 3.12
FAM3A-203ENST00000369641 TOPBP1Q92547 1522 aa34.36■■■■□ 3.09
FAM3A-203ENST00000369641 DNMBPQ6XZF7 1577 aa34.31■■■■□ 3.08
FAM3A-203ENST00000369641 ABCC8Q09428 1581 aa34.27■■■■□ 3.08
FAM3A-203ENST00000369641 CUX1P39880 1505 aa34.2■■■■□ 3.07
FAM3A-203ENST00000369641 POLA1P09884 1462 aaPredicted RBP34.09■■■■□ 3.05
FAM3A-203ENST00000369641 IFT140Q96RY7 1462 aa34.04■■■■□ 3.04
FAM3A-203ENST00000369641 FGD5Q6ZNL6 1462 aa34.03■■■■□ 3.04
FAM3A-203ENST00000369641 WRNQ14191 1432 aaPredicted RBP eCLIP34■■■■□ 3.03
FAM3A-203ENST00000369641 TARBP1Q13395 1621 aaKnown RBP33.99■■■■□ 3.03
FAM3A-203ENST00000369641 SYNJ1O43426 1573 aa33.97■■■■□ 3.03
FAM3A-203ENST00000369641 RAD54L2Q9Y4B4 1467 aa33.97■■■■□ 3.03
FAM3A-203ENST00000369641 ZNF608Q9ULD9 1512 aaPredicted RBP33.96■■■■□ 3.03
FAM3A-203ENST00000369641 BIVM-ERCC5R4GMW8 1640 aa33.94■■■■□ 3.02
FAM3A-203ENST00000369641 TOP2BQ02880 1626 aa33.93■■■■□ 3.02
FAM3A-203ENST00000369641 SOGA1O94964 1423 aa33.91■■■■□ 3.02
FAM3A-203ENST00000369641 EIF4G3O43432 1585 aaKnown RBP33.8■■■■□ 3
FAM3A-203ENST00000369641 WDR97A6NE52 1622 aa33.79■■■■□ 3
FAM3A-203ENST00000369641 AQRO60306 1485 aaKnown RBP eCLIP33.77■■■■□ 34e-7■■■□□ 18.5
FAM3A-203ENST00000369641 TDRD9Q8NDG6 1382 aaKnown RBP33.72■■■□□ 2.99
FAM3A-203ENST00000369641 ABCA10Q8WWZ4 1543 aa33.69■■■□□ 2.98
FAM3A-203ENST00000369641 ABCA5Q8WWZ7 1642 aa33.57■■■□□ 2.96
FAM3A-203ENST00000369641 GAPVD1Q14C86 1478 aa33.53■■■□□ 2.96
FAM3A-203ENST00000369641 PBRM1Q86U86 1689 aa33.49■■■□□ 2.95
FAM3A-203ENST00000369641 GRIN2BQ13224 1484 aa33.48■■■□□ 2.95
FAM3A-203ENST00000369641 SNAPC4Q5SXM2 1469 aa33.44■■■□□ 2.94
FAM3A-203ENST00000369641 DNAJC5Q9H3Z4 198 aa33.41■■■□□ 2.94
FAM3A-203ENST00000369641 MAGI1Q96QZ7 1491 aaPredicted RBP33.36■■■□□ 2.93
FAM3A-203ENST00000369641 CHD1O14646 1710 aa33.36■■■□□ 2.93
FAM3A-203ENST00000369641 TRIM41Q8WV44 630 aa33.3■■■□□ 2.92
FAM3A-203ENST00000369641 OSCARQ8IYS5 282 aa33.27■■■□□ 2.92
FAM3A-203ENST00000369641 ERICH3Q5RHP9 1530 aa33.27■■■□□ 2.92
FAM3A-203ENST00000369641 FBLN2P98095 1184 aa33.25■■■□□ 2.91
FAM3A-203ENST00000369641 KIF27Q86VH2 1401 aa33.24■■■□□ 2.91
FAM3A-203ENST00000369641 SYNJ2O15056 1496 aa33.24■■■□□ 2.91
FAM3A-203ENST00000369641 ADAMTS12P58397 1594 aa33.22■■■□□ 2.91
FAM3A-203ENST00000369641 CHMP7Q8WUX9 453 aaPredicted RBP33.18■■■□□ 2.9
FAM3A-203ENST00000369641 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
FAM3A-203ENST00000369641 IGF1RP08069 1367 aa33.15■■■□□ 2.9
FAM3A-203ENST00000369641 FHAD1B1AJZ9 1412 aa33.13■■■□□ 2.89
FAM3A-203ENST00000369641 CHIC1Q5VXU3 224 aa33.11■■■□□ 2.89
FAM3A-203ENST00000369641 GRIN2AQ12879 1464 aa33.07■■■□□ 2.88
FAM3A-203ENST00000369641 CUL7Q14999 1698 aa33■■■□□ 2.87
FAM3A-203ENST00000369641 CLASP1Q7Z460 1538 aa32.99■■■□□ 2.87
FAM3A-203ENST00000369641 CEP170Q5SW79 1584 aa32.95■■■□□ 2.87
FAM3A-203ENST00000369641 NUP160Q12769 1436 aa32.93■■■□□ 2.86
FAM3A-203ENST00000369641 CARMIL1Q5VZK9 1371 aa32.92■■■□□ 2.86
FAM3A-203ENST00000369641 RIMBP3CA6NJZ7 1639 aa32.81■■■□□ 2.84
FAM3A-203ENST00000369641 RIMBP3BA6NNM3 1639 aa32.81■■■□□ 2.84
FAM3A-203ENST00000369641 RIMBP3Q9UFD9 1639 aa32.81■■■□□ 2.84
FAM3A-203ENST00000369641 ARHGEF11O15085 1522 aa32.8■■■□□ 2.84
FAM3A-203ENST00000369641 RAPGEF2Q9Y4G8 1499 aa32.74■■■□□ 2.83
FAM3A-203ENST00000369641 PRXQ9BXM0 1461 aa32.71■■■□□ 2.83
FAM3A-203ENST00000369641 EEA1Q15075 1411 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms