RNA–Protein interactions for RNA: ENST00000618517.4

LINC01660-203, Transcript of long intergenic non-protein coding RNA 1660, humanhuman

TSL 2 BASIC

Gene LINC01660, Length 1,859 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01660-203ENST00000618517 NISCHQ9Y2I1 1504 aa38.23■■■■□ 3.71
LINC01660-203ENST00000618517 CCDC180Q9P1Z9 1646 aa33.5■■■□□ 2.95
LINC01660-203ENST00000618517 ABCC9O60706 1549 aa32.58■■■□□ 2.81
LINC01660-203ENST00000618517 DCAF8L2P0C7V8 631 aa32.08■■■□□ 2.73
LINC01660-203ENST00000618517 ZCCHC6Q5VYS8 1495 aaKnown RBP31.97■■■□□ 2.71
LINC01660-203ENST00000618517 DCAF1Q9Y4B6 1507 aa31.46■■■□□ 2.63
LINC01660-203ENST00000618517 NACADO15069 1562 aa31.4■■■□□ 2.62
LINC01660-203ENST00000618517 RB1CC1Q8TDY2 1594 aa31.33■■■□□ 2.61
LINC01660-203ENST00000618517 MYO15BQ96JP2 1530 aa31.29■■■□□ 2.6
LINC01660-203ENST00000618517 SHROOM4Q9ULL8 1493 aa31.02■■■□□ 2.56
LINC01660-203ENST00000618517 SCRIBQ14160 1630 aa30.96■■■□□ 2.55
LINC01660-203ENST00000618517 UNC13AQ9UPW8 1703 aa30.68■■■□□ 2.5
LINC01660-203ENST00000618517 PABPN1Q86U42 306 aaKnown RBP eCLIP30.67■■■□□ 2.5
LINC01660-203ENST00000618517 BICRAQ9NZM4 1560 aa30.47■■■□□ 2.47
LINC01660-203ENST00000618517 CECR2Q9BXF3 1484 aa29.9■■■□□ 2.38
LINC01660-203ENST00000618517 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
LINC01660-203ENST00000618517 MROH2BQ7Z745 1585 aa29.6■■■□□ 2.33
LINC01660-203ENST00000618517 BAZ1AQ9NRL2 1556 aaPredicted RBP29.53■■■□□ 2.32
LINC01660-203ENST00000618517 SMARCA4P51532 1647 aa29.52■■■□□ 2.32
LINC01660-203ENST00000618517 SUPT5HO00267 1087 aaKnown RBP29.48■■■□□ 2.31
LINC01660-203ENST00000618517 RSF1Q96T23 1441 aaPredicted RBP29.46■■■□□ 2.31
LINC01660-203ENST00000618517 DNAJC5BQ9UF47 199 aa29.42■■■□□ 2.3
LINC01660-203ENST00000618517 CC2D2AQ9P2K1 1620 aa29.36■■■□□ 2.29
LINC01660-203ENST00000618517 WIZO95785 1651 aa29.31■■■□□ 2.28
LINC01660-203ENST00000618517 ATAD2BQ9ULI0 1458 aa29.24■■■□□ 2.27
LINC01660-203ENST00000618517 SMARCA2P51531 1590 aa29.11■■■□□ 2.25
LINC01660-203ENST00000618517 PEG3Q9GZU2 1588 aa29.09■■■□□ 2.25
LINC01660-203ENST00000618517 NCAPD3P42695 1498 aa29.04■■■□□ 2.24
LINC01660-203ENST00000618517 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
LINC01660-203ENST00000618517 TOP2AP11388 1531 aaKnown RBP28.9■■■□□ 2.22
LINC01660-203ENST00000618517 HMGXB3Q12766 1538 aa28.9■■■□□ 2.22
LINC01660-203ENST00000618517 CCDC88BA6NC98 1476 aa28.67■■■□□ 2.18
LINC01660-203ENST00000618517 NESP48681 1621 aa28.4■■■□□ 2.14
LINC01660-203ENST00000618517 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
LINC01660-203ENST00000618517 CFTRP13569 1480 aa28.23■■■□□ 2.11
LINC01660-203ENST00000618517 LAMC3Q9Y6N6 1575 aa28.13■■■□□ 2.09
LINC01660-203ENST00000618517 FANCD2Q9BXW9 1451 aa28.01■■■□□ 2.08
LINC01660-203ENST00000618517 PDS5BQ9NTI5 1447 aa27.98■■■□□ 2.07
LINC01660-203ENST00000618517 ERCC6Q03468 1493 aa27.94■■■□□ 2.06
LINC01660-203ENST00000618517 ABCC8Q09428 1581 aa27.93■■■□□ 2.06
LINC01660-203ENST00000618517 KIF21AQ7Z4S6 1674 aa27.93■■■□□ 2.06
LINC01660-203ENST00000618517 PRDM2Q13029 1718 aa27.9■■■□□ 2.06
LINC01660-203ENST00000618517 CEP164Q9UPV0 1460 aa27.88■■■□□ 2.05
LINC01660-203ENST00000618517 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
LINC01660-203ENST00000618517 WRNQ14191 1432 aaPredicted RBP eCLIP27.74■■■□□ 2.03
LINC01660-203ENST00000618517 URB2Q14146 1524 aaKnown RBP27.73■■■□□ 2.03
LINC01660-203ENST00000618517 CUX1P39880 1505 aa27.7■■■□□ 2.02
LINC01660-203ENST00000618517 MRC2Q9UBG0 1479 aa27.69■■■□□ 2.02
LINC01660-203ENST00000618517 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
LINC01660-203ENST00000618517 TRIM41Q8WV44 630 aa27.65■■■□□ 2.02
LINC01660-203ENST00000618517 TOPBP1Q92547 1522 aa27.62■■■□□ 2.01
LINC01660-203ENST00000618517 THOC2Q8NI27 1593 aaKnown RBP27.62■■■□□ 2.01
LINC01660-203ENST00000618517 DNMBPQ6XZF7 1577 aa27.57■■■□□ 2
LINC01660-203ENST00000618517 WDR62O43379 1518 aa27.53■■■□□ 2
LINC01660-203ENST00000618517 TOP2BQ02880 1626 aa27.52■■■□□ 2
LINC01660-203ENST00000618517 FGD5Q6ZNL6 1462 aa27.5■■□□□ 1.99
LINC01660-203ENST00000618517 BIVM-ERCC5R4GMW8 1640 aa27.47■■□□□ 1.99
LINC01660-203ENST00000618517 POLA1P09884 1462 aaPredicted RBP27.46■■□□□ 1.99
LINC01660-203ENST00000618517 RAD54L2Q9Y4B4 1467 aa27.45■■□□□ 1.98
LINC01660-203ENST00000618517 CUX2O14529 1486 aa27.38■■□□□ 1.97
LINC01660-203ENST00000618517 SOGA1O94964 1423 aa27.37■■□□□ 1.97
LINC01660-203ENST00000618517 FAM9AQ8IZU1 332 aaPredicted RBP27.3■■□□□ 1.96
LINC01660-203ENST00000618517 TDRD9Q8NDG6 1382 aaKnown RBP27.25■■□□□ 1.95
LINC01660-203ENST00000618517 RUSC2Q8N2Y8 1516 aa27.25■■□□□ 1.95
LINC01660-203ENST00000618517 ZNF608Q9ULD9 1512 aaPredicted RBP27.23■■□□□ 1.95
LINC01660-203ENST00000618517 TARBP1Q13395 1621 aaKnown RBP27.23■■□□□ 1.95
LINC01660-203ENST00000618517 IFT140Q96RY7 1462 aa27.22■■□□□ 1.95
LINC01660-203ENST00000618517 AQRO60306 1485 aaKnown RBP eCLIP27.17■■□□□ 1.94
LINC01660-203ENST00000618517 ABCA10Q8WWZ4 1543 aa27.16■■□□□ 1.94
LINC01660-203ENST00000618517 WDR97A6NE52 1622 aa27.1■■□□□ 1.93
LINC01660-203ENST00000618517 EHMT2Q96KQ7 1210 aa27.08■■□□□ 1.93
LINC01660-203ENST00000618517 KIF27Q86VH2 1401 aa27.06■■□□□ 1.92
LINC01660-203ENST00000618517 GAPVD1Q14C86 1478 aa27.03■■□□□ 1.92
LINC01660-203ENST00000618517 EIF4G3O43432 1585 aaKnown RBP27.03■■□□□ 1.92
LINC01660-203ENST00000618517 ABCA5Q8WWZ7 1642 aa26.99■■□□□ 1.91
LINC01660-203ENST00000618517 IGF1RP08069 1367 aa26.94■■□□□ 1.9
LINC01660-203ENST00000618517 CSRNP3Q8WYN3 585 aa26.94■■□□□ 1.9
LINC01660-203ENST00000618517 GRIN2BQ13224 1484 aa26.89■■□□□ 1.9
LINC01660-203ENST00000618517 PBRM1Q86U86 1689 aa26.87■■□□□ 1.89
LINC01660-203ENST00000618517 SNAPC4Q5SXM2 1469 aa26.87■■□□□ 1.89
LINC01660-203ENST00000618517 EEA1Q15075 1411 aa26.85■■□□□ 1.89
LINC01660-203ENST00000618517 FBLN2P98095 1184 aa26.83■■□□□ 1.88
LINC01660-203ENST00000618517 LOC105371045A0A1W2PR82 267 aa26.81■■□□□ 1.88
LINC01660-203ENST00000618517 ERICH3Q5RHP9 1530 aa26.8■■□□□ 1.88
LINC01660-203ENST00000618517 CARMIL1Q5VZK9 1371 aa26.79■■□□□ 1.88
LINC01660-203ENST00000618517 RAPGEF2Q9Y4G8 1499 aa26.72■■□□□ 1.87
LINC01660-203ENST00000618517 ADAMTS12P58397 1594 aa26.71■■□□□ 1.87
LINC01660-203ENST00000618517 CHMP7Q8WUX9 453 aaPredicted RBP26.71■■□□□ 1.87
LINC01660-203ENST00000618517 PRXQ9BXM0 1461 aa26.71■■□□□ 1.87
LINC01660-203ENST00000618517 FHAD1B1AJZ9 1412 aa26.7■■□□□ 1.86
LINC01660-203ENST00000618517 MAGI1Q96QZ7 1491 aaPredicted RBP26.69■■□□□ 1.86
LINC01660-203ENST00000618517 CUL7Q14999 1698 aa26.66■■□□□ 1.86
LINC01660-203ENST00000618517 SYNJ2O15056 1496 aa26.64■■□□□ 1.85
LINC01660-203ENST00000618517 UBTFP17480 764 aaKnown RBP26.62■■□□□ 1.85
LINC01660-203ENST00000618517 RANGAP1P46060 587 aaPredicted RBP26.58■■□□□ 1.85
LINC01660-203ENST00000618517 KIF21BO75037 1637 aa26.58■■□□□ 1.85
LINC01660-203ENST00000618517 GRIN2AQ12879 1464 aa26.58■■□□□ 1.85
LINC01660-203ENST00000618517 CHD1O14646 1710 aa26.56■■□□□ 1.84
LINC01660-203ENST00000618517 GOLGA3Q08378 1498 aa26.56■■□□□ 1.84
LINC01660-203ENST00000618517 CEP170Q5SW79 1584 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 172.6 ms