Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 AC106881.1-201ENST00000605849 3329 ntBASIC13.79□□□□□ -0.2
UBA52P62987 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBA52P62987 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
UBA52P62987 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
UBA52P62987 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
UBA52P62987 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC13.79□□□□□ -0.2
UBA52P62987 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
UBA52P62987 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.78□□□□□ -0.2
UBA52P62987 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.78□□□□□ -0.2
UBA52P62987 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UBA52P62987 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC13.78□□□□□ -0.2
UBA52P62987 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UBA52P62987 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 AL035633.1-201ENST00000406139 838 ntBASIC13.78□□□□□ -0.2
UBA52P62987 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 BCRP1-201ENST00000444246 691 ntBASIC13.78□□□□□ -0.2
UBA52P62987 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC13.78□□□□□ -0.2
UBA52P62987 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 CYB561-216ENST00000582297 897 ntTSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.78□□□□□ -0.2
UBA52P62987 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
UBA52P62987 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
UBA52P62987 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.78□□□□□ -0.2
UBA52P62987 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 AL109954.1-202ENST00000564051 2148 ntBASIC13.78□□□□□ -0.2
UBA52P62987 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.78□□□□□ -0.2
UBA52P62987 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.78□□□□□ -0.2
UBA52P62987 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
UBA52P62987 SSR4P1-203ENST00000599569 2260 ntBASIC13.78□□□□□ -0.2
UBA52P62987 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
UBA52P62987 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.2
UBA52P62987 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC13.77□□□□□ -0.2
UBA52P62987 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.77□□□□□ -0.2
UBA52P62987 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
UBA52P62987 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBA52P62987 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
UBA52P62987 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBA52P62987 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
UBA52P62987 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 KCNJ14-201ENST00000342291 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
UBA52P62987 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.77□□□□□ -0.21
UBA52P62987 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
UBA52P62987 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms